RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 POLR3GO15318 223 aaPredicted RBP16.43■□□□□ 0.22
TGFBR3-204ENST00000465892 JAK2O60674 1132 aa16.43■□□□□ 0.22
TGFBR3-204ENST00000465892 NYAP1Q6ZVC0 841 aa16.43■□□□□ 0.22
TGFBR3-204ENST00000465892 SCAND2PQ9GZW5 306 aaPredicted RBP16.43■□□□□ 0.22
TGFBR3-204ENST00000465892 NPHP3Q7Z494 1330 aa16.43■□□□□ 0.22
TGFBR3-204ENST00000465892 KIF1BPQ96EK5 621 aa16.42■□□□□ 0.22
TGFBR3-204ENST00000465892 AATKQ6ZMQ8 1374 aa16.42■□□□□ 0.22
TGFBR3-204ENST00000465892 ERBB3P21860 1342 aa16.42■□□□□ 0.22
TGFBR3-204ENST00000465892 TTC21AQ8NDW8 1320 aa16.42■□□□□ 0.22
TGFBR3-204ENST00000465892 SLU7O95391 586 aaKnown RBP16.42■□□□□ 0.22
TGFBR3-204ENST00000465892 ERO1AQ96HE7 468 aa16.42■□□□□ 0.22
TGFBR3-204ENST00000465892 HNRNPH2P55795 449 aaKnown RBP16.42■□□□□ 0.22
TGFBR3-204ENST00000465892 CREB3L3Q68CJ9 461 aa16.42■□□□□ 0.22
TGFBR3-204ENST00000465892 CCAR2Q8N163 923 aaKnown RBP16.41■□□□□ 0.22
TGFBR3-204ENST00000465892 ELP1O95163 1332 aa16.41■□□□□ 0.22
TGFBR3-204ENST00000465892 AOX1Q06278 1338 aa16.41■□□□□ 0.22
TGFBR3-204ENST00000465892 CCDC171Q6TFL3 1326 aa16.41■□□□□ 0.22
TGFBR3-204ENST00000465892 HECW2Q9P2P5 1572 aa16.41■□□□□ 0.22
TGFBR3-204ENST00000465892 ANXA1P04083 346 aa16.41■□□□□ 0.22
TGFBR3-204ENST00000465892 CCZ1BP86790 482 aa16.41■□□□□ 0.22
TGFBR3-204ENST00000465892 CCZ1P86791 482 aaPredicted RBP16.41■□□□□ 0.22
TGFBR3-204ENST00000465892 IQCB1Q15051 598 aa16.41■□□□□ 0.22
TGFBR3-204ENST00000465892 SYT10Q6XYQ8 523 aa16.41■□□□□ 0.22
TGFBR3-204ENST00000465892 TRIM34Q9BYJ4 488 aa16.41■□□□□ 0.22
TGFBR3-204ENST00000465892 CCDC61Q9Y6R9 512 aa16.41■□□□□ 0.22
TGFBR3-204ENST00000465892 NECTIN1Q15223 517 aa16.4■□□□□ 0.22
TGFBR3-204ENST00000465892 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
TGFBR3-204ENST00000465892 PPP6R1Q9UPN7 881 aa16.4■□□□□ 0.22
TGFBR3-204ENST00000465892 PA2G4Q9UQ80 394 aaKnown RBP16.4■□□□□ 0.22
TGFBR3-204ENST00000465892 EPB41L2O43491 1005 aaKnown RBP16.4■□□□□ 0.22
TGFBR3-204ENST00000465892 NEK11Q8NG66 645 aa16.39■□□□□ 0.21
TGFBR3-204ENST00000465892 RUFY2Q8WXA3 655 aa16.39■□□□□ 0.21
TGFBR3-204ENST00000465892 CLTCQ00610 1675 aaKnown RBP16.39■□□□□ 0.21
TGFBR3-204ENST00000465892 CALCOCO1Q9P1Z2 691 aa16.39■□□□□ 0.21
TGFBR3-204ENST00000465892 PDCP20941 246 aa16.39■□□□□ 0.21
TGFBR3-204ENST00000465892 CLCN6P51797 869 aa16.39■□□□□ 0.21
TGFBR3-204ENST00000465892 CERS3Q8IU89 383 aa16.39■□□□□ 0.21
TGFBR3-204ENST00000465892 GLRX3O76003 335 aaKnown RBP16.38■□□□□ 0.21
TGFBR3-204ENST00000465892 IFIT2P09913 472 aaKnown RBP16.38■□□□□ 0.21
TGFBR3-204ENST00000465892 BLOC1S2Q6QNY1 142 aa16.38■□□□□ 0.21
TGFBR3-204ENST00000465892 RBM43Q6ZSC3 357 aaKnown RBP16.38■□□□□ 0.21
TGFBR3-204ENST00000465892 FMNL2Q96PY5 1086 aa16.38■□□□□ 0.21
TGFBR3-204ENST00000465892 SNW1Q13573 536 aaKnown RBP16.38■□□□□ 0.21
TGFBR3-204ENST00000465892 TAF7Q15545 349 aaPredicted RBP16.38■□□□□ 0.21
TGFBR3-204ENST00000465892 ARHGAP29Q52LW3 1261 aa16.38■□□□□ 0.21
TGFBR3-204ENST00000465892 EPC1Q9H2F5 836 aa16.38■□□□□ 0.21
TGFBR3-204ENST00000465892 FAM53CQ9NYF3 392 aa16.38■□□□□ 0.21
TGFBR3-204ENST00000465892 ALKQ9UM73 1620 aa16.38■□□□□ 0.21
TGFBR3-204ENST00000465892 H3BQV1 296 aa16.37■□□□□ 0.21
TGFBR3-204ENST00000465892 SLC27A2O14975 620 aa16.37■□□□□ 0.21
TGFBR3-204ENST00000465892 NMIQ13287 307 aaPredicted RBP16.37■□□□□ 0.21
TGFBR3-204ENST00000465892 IFFO2Q5TF58 517 aa16.37■□□□□ 0.21
TGFBR3-204ENST00000465892 HDGFL1Q5TGJ6 251 aa16.37■□□□□ 0.21
TGFBR3-204ENST00000465892 AOPEPQ8N6M6 819 aa16.37■□□□□ 0.21
TGFBR3-204ENST00000465892 IPO4Q8TEX9 1081 aaKnown RBP16.37■□□□□ 0.21
TGFBR3-204ENST00000465892 BRF1Q92994 677 aa16.37■□□□□ 0.21
TGFBR3-204ENST00000465892 LRRC2Q9BYS8 371 aa16.37■□□□□ 0.21
TGFBR3-204ENST00000465892 ZCCHC17Q9NP64 241 aaKnown RBP16.37■□□□□ 0.21
TGFBR3-204ENST00000465892 FHOD1Q9Y613 1164 aa16.37■□□□□ 0.21
TGFBR3-204ENST00000465892 BMS1Q14692 1282 aaKnown RBP16.36■□□□□ 0.21
TGFBR3-204ENST00000465892 CLASRPQ8N2M8 674 aaKnown RBP16.36■□□□□ 0.21
TGFBR3-204ENST00000465892 TOB2Q14106 344 aaPredicted RBP16.36■□□□□ 0.21
TGFBR3-204ENST00000465892 POLA2Q14181 598 aa16.36■□□□□ 0.21
TGFBR3-204ENST00000465892 CCAR1Q8IX12 1150 aaKnown RBP16.36■□□□□ 0.21
TGFBR3-204ENST00000465892 MRFAP1L1Q96HT8 127 aa16.36■□□□□ 0.21
TGFBR3-204ENST00000465892 ZFP91Q96JP5 570 aaPredicted RBP16.36■□□□□ 0.21
TGFBR3-204ENST00000465892 TM6SF1Q9BZW5 370 aa16.36■□□□□ 0.21
TGFBR3-204ENST00000465892 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.36■□□□□ 0.21
TGFBR3-204ENST00000465892 SEC31AO94979 1220 aaKnown RBP16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 CYP2C19P33261 490 aa16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 E4F1Q66K89 784 aaPredicted RBP16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 CCDC8Q9H0W5 538 aaPredicted RBP16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 GOLPH3LQ9H4A5 285 aa16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 PREX1Q8TCU6 1659 aa16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 HOMER1Q86YM7 354 aa16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 DHX40Q8IX18 779 aaKnown RBP16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 A0A0D9SFI3 127 aa16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 PNMA6AP0CW24 399 aaPredicted RBP16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 HSP90B1P14625 803 aaKnown RBP16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 PLA2G4AP47712 749 aa16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 PTPN21Q16825 1174 aa16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 AACSQ86V21 672 aa16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 DNAJC2Q99543 621 aaKnown RBP16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 ECHDC1Q9NTX5 307 aa16.35■□□□□ 0.21
TGFBR3-204ENST00000465892 RIMS1Q86UR5 1692 aaKnown RBP16.34■□□□□ 0.21
TGFBR3-204ENST00000465892 PI4KAP2A4QPH2 592 aa16.34■□□□□ 0.21
TGFBR3-204ENST00000465892 CDC25BP30305 580 aa16.34■□□□□ 0.21
TGFBR3-204ENST00000465892 PI4KAP1Q8N8J0 262 aa16.34■□□□□ 0.21
TGFBR3-204ENST00000465892 BOLA2Q9H3K6 86 aa16.34■□□□□ 0.21
TGFBR3-204ENST00000465892 PRR36Q9H6K5 1346 aa16.34■□□□□ 0.21
TGFBR3-204ENST00000465892 SMC2O95347 1197 aa16.34■□□□□ 0.21
TGFBR3-204ENST00000465892 GUCY1B3Q02153 619 aa16.34■□□□□ 0.21
TGFBR3-204ENST00000465892 FAM177A1Q8N128 213 aaPredicted RBP16.34■□□□□ 0.21
TGFBR3-204ENST00000465892 LTV1Q96GA3 475 aaPredicted RBP16.34■□□□□ 0.21
TGFBR3-204ENST00000465892 H2AFXP16104 143 aaPredicted RBP16.33■□□□□ 0.21
TGFBR3-204ENST00000465892 ST5P78524 1137 aa16.33■□□□□ 0.21
TGFBR3-204ENST00000465892 STX1AQ16623 288 aa16.33■□□□□ 0.21
TGFBR3-204ENST00000465892 EDC3Q96F86 508 aaKnown RBP16.33■□□□□ 0.21
TGFBR3-204ENST00000465892 PPP1R13BQ96KQ4 1090 aa16.33■□□□□ 0.21
TGFBR3-204ENST00000465892 EYA1Q99502 592 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms