RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 RAB44Q7Z6P3 723 aaPredicted RBP11.5□□□□□ -0.57
SSB-207ENST00000465871 TNFRSF25Q93038 417 aa11.5□□□□□ -0.57
SSB-207ENST00000465871 ADARB2-AS1A8MUL3 147 aa11.49□□□□□ -0.57
SSB-207ENST00000465871 ALAS2P22557 587 aa11.49□□□□□ -0.57
SSB-207ENST00000465871 ELOAQ14241 798 aaKnown RBP11.48□□□□□ -0.57
SSB-207ENST00000465871 SWI5Q1ZZU3 235 aa11.48□□□□□ -0.57
SSB-207ENST00000465871 VTI1AQ96AJ9 217 aa11.48□□□□□ -0.57
SSB-207ENST00000465871 SUV39H2Q9H5I1 410 aa11.48□□□□□ -0.57
SSB-207ENST00000465871 NOP53Q9NZM5 478 aaKnown RBP11.48□□□□□ -0.57
SSB-207ENST00000465871 ZMIZ1Q9ULJ6 1067 aa11.48□□□□□ -0.57
SSB-207ENST00000465871 BCS1LQ9Y276 419 aa11.48□□□□□ -0.57
SSB-207ENST00000465871 ACIN1Q9UKV3 1341 aaKnown RBP11.47□□□□□ -0.57
SSB-207ENST00000465871 ITGB2P05107 769 aa11.47□□□□□ -0.57
SSB-207ENST00000465871 QTRT2Q9H974 415 aaKnown RBP11.47□□□□□ -0.57
SSB-207ENST00000465871 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.46□□□□□ -0.57
SSB-207ENST00000465871 DMGDHQ9UI17 866 aaKnown RBP11.46□□□□□ -0.57
SSB-207ENST00000465871 KRBA1A5PL33 1030 aa11.45□□□□□ -0.58
SSB-207ENST00000465871 SRPK2P78362 688 aaKnown RBP11.45□□□□□ -0.58
SSB-207ENST00000465871 DGKZQ13574 1117 aa11.45□□□□□ -0.58
SSB-207ENST00000465871 MYO19Q96H55 970 aa11.45□□□□□ -0.58
SSB-207ENST00000465871 KLK14Q9P0G3 267 aa11.45□□□□□ -0.58
SSB-207ENST00000465871 GTF3C3Q9Y5Q9 886 aa11.45□□□□□ -0.58
SSB-207ENST00000465871 ADH7P40394 386 aa11.44□□□□□ -0.58
SSB-207ENST00000465871 BHMTQ93088 406 aa11.44□□□□□ -0.58
SSB-207ENST00000465871 EFCC1Q9HA90 598 aa11.44□□□□□ -0.58
SSB-207ENST00000465871 MSTNO14793 375 aa11.43□□□□□ -0.58
SSB-207ENST00000465871 EPB42P16452 691 aa11.43□□□□□ -0.58
SSB-207ENST00000465871 STK32AQ8WU08 396 aa11.43□□□□□ -0.58
SSB-207ENST00000465871 CCDC97Q96F63 343 aaPredicted RBP11.43□□□□□ -0.58
SSB-207ENST00000465871 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.43□□□□□ -0.58
SSB-207ENST00000465871 ATG7O95352 703 aa11.42□□□□□ -0.58
SSB-207ENST00000465871 FAM69CQ0P6D2 419 aa11.42□□□□□ -0.58
SSB-207ENST00000465871 FKBP5Q13451 457 aaPredicted RBP11.42□□□□□ -0.58
SSB-207ENST00000465871 TRIM11Q96F44 468 aa11.42□□□□□ -0.58
SSB-207ENST00000465871 SPOCK3Q9BQ16 436 aa11.42□□□□□ -0.58
SSB-207ENST00000465871 PROCP04070 461 aa11.41□□□□□ -0.58
SSB-207ENST00000465871 IDH3AP50213 366 aa11.41□□□□□ -0.58
SSB-207ENST00000465871 PRIMPOLQ96LW4 560 aa11.41□□□□□ -0.58
SSB-207ENST00000465871 PRMT3O60678 531 aa11.4□□□□□ -0.58
SSB-207ENST00000465871 INPP5BP32019 993 aa11.4□□□□□ -0.58
SSB-207ENST00000465871 OCLNQ16625 522 aa11.4□□□□□ -0.58
SSB-207ENST00000465871 C11orf91Q3C1V1 193 aa11.4□□□□□ -0.58
SSB-207ENST00000465871 GSX2Q9BZM3 304 aa11.4□□□□□ -0.58
SSB-207ENST00000465871 SERPINA10Q9UK55 444 aa11.4□□□□□ -0.58
SSB-207ENST00000465871 STARD13Q9Y3M8 1113 aa11.4□□□□□ -0.58
SSB-207ENST00000465871 M0R082 166 aa11.39□□□□□ -0.59
SSB-207ENST00000465871 ALBP02768 609 aa11.39□□□□□ -0.59
SSB-207ENST00000465871 GRNP28799 593 aaKnown RBP11.39□□□□□ -0.59
SSB-207ENST00000465871 ARSDP51689 593 aa11.39□□□□□ -0.59
SSB-207ENST00000465871 CCINQ13939 588 aa11.39□□□□□ -0.59
SSB-207ENST00000465871 ZNF417Q8TAU3 575 aa11.39□□□□□ -0.59
SSB-207ENST00000465871 PBXIP1Q96AQ6 731 aa11.39□□□□□ -0.59
SSB-207ENST00000465871 PNMA5Q96PV4 448 aa11.39□□□□□ -0.59
SSB-207ENST00000465871 ZNF587Q96SQ5 575 aaPredicted RBP11.39□□□□□ -0.59
SSB-207ENST00000465871 UBE2OQ9C0C9 1292 aaKnown RBP11.39□□□□□ -0.59
SSB-207ENST00000465871 PRDM6Q9NQX0 595 aa11.39□□□□□ -0.59
SSB-207ENST00000465871 PLVAPQ9BX97 442 aa11.38□□□□□ -0.59
SSB-207ENST00000465871 LRFN2Q9ULH4 789 aa11.38□□□□□ -0.59
SSB-207ENST00000465871 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.38□□□□□ -0.59
SSB-207ENST00000465871 MICAL2O94851 1124 aa11.37□□□□□ -0.59
SSB-207ENST00000465871 TMEM164Q5U3C3 297 aa11.37□□□□□ -0.59
SSB-207ENST00000465871 MICALL1Q8N3F8 863 aa11.37□□□□□ -0.59
SSB-207ENST00000465871 NFKB1P19838 968 aa11.36□□□□□ -0.59
SSB-207ENST00000465871 TBC1D8BQ0IIM8 1120 aa11.36□□□□□ -0.59
SSB-207ENST00000465871 ARID3CA6NKF2 412 aa11.35□□□□□ -0.59
SSB-207ENST00000465871 COX20Q5RI15 118 aa11.35□□□□□ -0.59
SSB-207ENST00000465871 COL26A1Q96A83 441 aa11.35□□□□□ -0.59
SSB-207ENST00000465871 C11orf16Q9NQ32 467 aa11.35□□□□□ -0.59
SSB-207ENST00000465871 CXXC1Q9P0U4 656 aaPredicted RBP11.35□□□□□ -0.59
SSB-207ENST00000465871 SLC6A14Q9UN76 642 aa11.35□□□□□ -0.59
SSB-207ENST00000465871 SPDYE3A6NKU9 549 aa11.34□□□□□ -0.59
SSB-207ENST00000465871 SPATA31C1P0DKV0 1188 aa11.34□□□□□ -0.59
SSB-207ENST00000465871 COL9A3Q14050 684 aaPredicted RBP11.34□□□□□ -0.59
SSB-207ENST00000465871 SUZ12Q15022 739 aaKnown RBP11.34□□□□□ -0.59
SSB-207ENST00000465871 C20orf204Q6ZNR8 217 aa11.34□□□□□ -0.59
SSB-207ENST00000465871 IFT43Q96FT9 208 aa11.34□□□□□ -0.59
SSB-207ENST00000465871 IGFLR1Q9H665 355 aa11.34□□□□□ -0.59
SSB-207ENST00000465871 DNAJB12Q9NXW2 375 aaKnown RBP11.34□□□□□ -0.59
SSB-207ENST00000465871 C8orf86Q6ZUL3 223 aa11.33□□□□□ -0.6
SSB-207ENST00000465871 C1QTNF9BB2RNN3 333 aa11.32□□□□□ -0.6
SSB-207ENST00000465871 NID1P14543 1247 aa11.32□□□□□ -0.6
SSB-207ENST00000465871 CD163Q86VB7 1156 aa11.32□□□□□ -0.6
SSB-207ENST00000465871 TREML1Q86YW5 311 aa11.32□□□□□ -0.6
SSB-207ENST00000465871 CLP1Q92989 425 aaKnown RBP11.32□□□□□ -0.6
SSB-207ENST00000465871 MAP3K6O95382 1288 aa11.31□□□□□ -0.6
SSB-207ENST00000465871 CHRNA4P43681 627 aa11.31□□□□□ -0.6
SSB-207ENST00000465871 C16orf46Q6P387 395 aa11.31□□□□□ -0.6
SSB-207ENST00000465871 OPLAHO14841 1288 aa11.3□□□□□ -0.6
SSB-207ENST00000465871 LILRB5O75023 590 aa11.3□□□□□ -0.6
SSB-207ENST00000465871 PRRT3Q5FWE3 981 aa11.3□□□□□ -0.6
SSB-207ENST00000465871 MKNK1Q9BUB5 465 aa11.3□□□□□ -0.6
SSB-207ENST00000465871 ZFATQ9P243 1243 aa11.3□□□□□ -0.6
SSB-207ENST00000465871 NAGPAQ9UK23 515 aa11.3□□□□□ -0.6
SSB-207ENST00000465871 RTCBQ9Y3I0 505 aaKnown RBP11.3□□□□□ -0.6
SSB-207ENST00000465871 PCSK7Q16549 785 aa11.29□□□□□ -0.6
SSB-207ENST00000465871 KRT25Q7Z3Z0 450 aa11.29□□□□□ -0.6
SSB-207ENST00000465871 SAP130Q9H0E3 1048 aa11.29□□□□□ -0.6
SSB-207ENST00000465871 PTCD1O75127 700 aaKnown RBP11.28□□□□□ -0.6
SSB-207ENST00000465871 RARAP10276 462 aa11.28□□□□□ -0.6
SSB-207ENST00000465871 BRD2P25440 801 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms