RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 COPS6Q7L5N1 327 aa12.85□□□□□ -0.35
CTNNB1-211ENST00000465552 NBPF5PQ86XG9 351 aaPredicted RBP12.85□□□□□ -0.35
CTNNB1-211ENST00000465552 DDX21Q9NR30 783 aaKnown RBP eCLIP12.85□□□□□ -0.35
CTNNB1-211ENST00000465552 UBN2Q6ZU65 1347 aa12.85□□□□□ -0.35
CTNNB1-211ENST00000465552 ST5P78524 1137 aa12.84□□□□□ -0.35
CTNNB1-211ENST00000465552 CLEC4GQ6UXB4 293 aa12.84□□□□□ -0.35
CTNNB1-211ENST00000465552 IL16Q14005 1332 aa12.84□□□□□ -0.35
CTNNB1-211ENST00000465552 ABCC12Q96J65 1359 aa12.83□□□□□ -0.36
CTNNB1-211ENST00000465552 YY1P25490 414 aa12.83□□□□□ -0.36
CTNNB1-211ENST00000465552 TWISTNBQ3B726 338 aaPredicted RBP12.83□□□□□ -0.36
CTNNB1-211ENST00000465552 NUTM1Q86Y26 1132 aa12.83□□□□□ -0.36
CTNNB1-211ENST00000465552 C2CD5Q86YS7 1000 aa12.83□□□□□ -0.36
CTNNB1-211ENST00000465552 PHAXQ9H814 394 aaKnown RBP12.83□□□□□ -0.36
CTNNB1-211ENST00000465552 DBF4Q9UBU7 674 aaPredicted RBP12.83□□□□□ -0.36
CTNNB1-211ENST00000465552 ERVV-1B6SEH8 477 aa12.82□□□□□ -0.36
CTNNB1-211ENST00000465552 KCNA3P22001 575 aa12.82□□□□□ -0.36
CTNNB1-211ENST00000465552 EXOSC9Q06265 439 aaKnown RBP12.82□□□□□ -0.36
CTNNB1-211ENST00000465552 CHADLQ6NUI6 762 aa12.82□□□□□ -0.36
CTNNB1-211ENST00000465552 GIGYF2Q6Y7W6 1299 aaKnown RBP12.82□□□□□ -0.36
CTNNB1-211ENST00000465552 WDR63Q8IWG1 891 aa12.82□□□□□ -0.36
CTNNB1-211ENST00000465552 GTF2E1P29083 439 aaPredicted RBP12.81□□□□□ -0.36
CTNNB1-211ENST00000465552 PIM2Q9P1W9 311 aa12.81□□□□□ -0.36
CTNNB1-211ENST00000465552 H0YIN7 160 aa12.8□□□□□ -0.36
CTNNB1-211ENST00000465552 GRIN3BO60391 1043 aa12.8□□□□□ -0.36
CTNNB1-211ENST00000465552 CCDC30Q5VVM6 783 aa12.8□□□□□ -0.36
CTNNB1-211ENST00000465552 SUSD4Q5VX71 490 aa12.8□□□□□ -0.36
CTNNB1-211ENST00000465552 ZNF622Q969S3 477 aaKnown RBP eCLIP12.8□□□□□ -0.36
CTNNB1-211ENST00000465552 HYPKQ9NX55 129 aa12.8□□□□□ -0.36
CTNNB1-211ENST00000465552 ZNF521Q96K83 1311 aa12.8□□□□□ -0.36
CTNNB1-211ENST00000465552 PDE6BP35913 854 aa12.79□□□□□ -0.36
CTNNB1-211ENST00000465552 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
CTNNB1-211ENST00000465552 ERFEQ4G0M1 354 aa12.79□□□□□ -0.36
CTNNB1-211ENST00000465552 DALRD3Q5D0E6 543 aaKnown RBP12.79□□□□□ -0.36
CTNNB1-211ENST00000465552 TPTE2Q6XPS3 522 aa12.79□□□□□ -0.36
CTNNB1-211ENST00000465552 ZNF34Q8IZ26 560 aa12.79□□□□□ -0.36
CTNNB1-211ENST00000465552 BRIP1Q9BX63 1249 aa12.79□□□□□ -0.36
CTNNB1-211ENST00000465552 STK31Q9BXU1 1019 aa12.79□□□□□ -0.36
CTNNB1-211ENST00000465552 IBTKQ9P2D0 1353 aaPredicted RBP12.79□□□□□ -0.36
CTNNB1-211ENST00000465552 COL4A1P02462 1669 aa12.78□□□□□ -0.36
CTNNB1-211ENST00000465552 ATP5J2-PTCD1G3V325 749 aa12.78□□□□□ -0.36
CTNNB1-211ENST00000465552 RGL2O15211 777 aa12.78□□□□□ -0.36
CTNNB1-211ENST00000465552 NTSR2O95665 410 aa12.78□□□□□ -0.36
CTNNB1-211ENST00000465552 ANKRD13DQ6ZTN6 518 aa12.78□□□□□ -0.36
CTNNB1-211ENST00000465552 PLBD2Q8NHP8 589 aa12.78□□□□□ -0.36
CTNNB1-211ENST00000465552 NYXQ9GZU5 481 aa12.78□□□□□ -0.36
CTNNB1-211ENST00000465552 MYH16Q9H6N6 1097 aa12.78□□□□□ -0.36
CTNNB1-211ENST00000465552 LRRC37AA6NMS7 1700 aa12.78□□□□□ -0.36
CTNNB1-211ENST00000465552 A0A1B0GUL6 1792 aa12.78□□□□□ -0.36
CTNNB1-211ENST00000465552 HSP90AB3PQ58FF7 597 aa12.77□□□□□ -0.37
CTNNB1-211ENST00000465552 ARHGAP27Q6ZUM4 889 aa12.77□□□□□ -0.37
CTNNB1-211ENST00000465552 G2E3Q7L622 706 aa12.77□□□□□ -0.37
CTNNB1-211ENST00000465552 PPP1R42Q7Z4L9 355 aa12.77□□□□□ -0.37
CTNNB1-211ENST00000465552 RIC3Q7Z5B4 369 aa12.77□□□□□ -0.37
CTNNB1-211ENST00000465552 RASSF7Q02833 373 aa12.76□□□□□ -0.37
CTNNB1-211ENST00000465552 TCIRG1Q13488 830 aa12.76□□□□□ -0.37
CTNNB1-211ENST00000465552 PARP10Q53GL7 1025 aa12.76□□□□□ -0.37
CTNNB1-211ENST00000465552 RTL5Q5HYW3 569 aaPredicted RBP12.76□□□□□ -0.37
CTNNB1-211ENST00000465552 NLRP10Q86W26 655 aa12.76□□□□□ -0.37
CTNNB1-211ENST00000465552 SYNE4Q8N205 404 aa12.76□□□□□ -0.37
CTNNB1-211ENST00000465552 TTLL6Q8N841 843 aa12.76□□□□□ -0.37
CTNNB1-211ENST00000465552 CDCA7LQ96GN5 454 aa12.76□□□□□ -0.37
CTNNB1-211ENST00000465552 MYD88Q99836 296 aa12.76□□□□□ -0.37
CTNNB1-211ENST00000465552 RIC1Q4ADV7 1423 aa12.76□□□□□ -0.37
CTNNB1-211ENST00000465552 ADCY9O60503 1353 aa12.75□□□□□ -0.37
CTNNB1-211ENST00000465552 VAMP4O75379 141 aa12.75□□□□□ -0.37
CTNNB1-211ENST00000465552 SRGNP10124 158 aa12.75□□□□□ -0.37
CTNNB1-211ENST00000465552 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
CTNNB1-211ENST00000465552 UTP14AQ9BVJ6 771 aaKnown RBP12.75□□□□□ -0.37
CTNNB1-211ENST00000465552 TRMT112Q9UI30 125 aaKnown RBP12.75□□□□□ -0.37
CTNNB1-211ENST00000465552 DDX58O95786 925 aaKnown RBP12.74□□□□□ -0.37
CTNNB1-211ENST00000465552 MASTLQ96GX5 879 aa12.74□□□□□ -0.37
CTNNB1-211ENST00000465552 MAP3K2Q9Y2U5 619 aa12.74□□□□□ -0.37
CTNNB1-211ENST00000465552 C21orf2O43822 256 aa12.73□□□□□ -0.37
CTNNB1-211ENST00000465552 HCLS1P14317 486 aaPredicted RBP12.73□□□□□ -0.37
CTNNB1-211ENST00000465552 STYK1Q6J9G0 422 aa12.73□□□□□ -0.37
CTNNB1-211ENST00000465552 PRPF40BQ6NWY9 871 aaKnown RBP12.73□□□□□ -0.37
CTNNB1-211ENST00000465552 SLC51AQ86UW1 340 aa12.73□□□□□ -0.37
CTNNB1-211ENST00000465552 ZNF526Q8TF50 670 aaPredicted RBP12.73□□□□□ -0.37
CTNNB1-211ENST00000465552 RPGRQ92834 1020 aaKnown RBP12.73□□□□□ -0.37
CTNNB1-211ENST00000465552 ISCA1Q9BUE6 129 aa12.73□□□□□ -0.37
CTNNB1-211ENST00000465552 SH3TC1Q8TE82 1336 aa12.72□□□□□ -0.37
CTNNB1-211ENST00000465552 PI4KAP2A4QPH2 592 aa12.72□□□□□ -0.37
CTNNB1-211ENST00000465552 E9PSI1 815 aa12.72□□□□□ -0.37
CTNNB1-211ENST00000465552 NPR1P16066 1061 aa12.72□□□□□ -0.37
CTNNB1-211ENST00000465552 HNRNPUQ00839 825 aaKnown RBP eCLIP12.72□□□□□ -0.37
CTNNB1-211ENST00000465552 SLFN5Q08AF3 891 aa12.72□□□□□ -0.37
CTNNB1-211ENST00000465552 FLIIQ13045 1269 aa12.72□□□□□ -0.37
CTNNB1-211ENST00000465552 FKBP5Q13451 457 aaPredicted RBP12.72□□□□□ -0.37
CTNNB1-211ENST00000465552 OLFM4Q6UX06 510 aa12.72□□□□□ -0.37
CTNNB1-211ENST00000465552 PI4KAP1Q8N8J0 262 aa12.72□□□□□ -0.37
CTNNB1-211ENST00000465552 JARID2Q92833 1246 aaPredicted RBP12.72□□□□□ -0.37
CTNNB1-211ENST00000465552 CNKSR1Q969H4 720 aa12.72□□□□□ -0.37
CTNNB1-211ENST00000465552 FAM89AQ96GI7 184 aa12.72□□□□□ -0.37
CTNNB1-211ENST00000465552 CHMP4AQ9BY43 222 aa12.72□□□□□ -0.37
CTNNB1-211ENST00000465552 PDZRN3Q9UPQ7 1066 aa12.72□□□□□ -0.37
CTNNB1-211ENST00000465552 KSR2Q6VAB6 950 aa12.71□□□□□ -0.37
CTNNB1-211ENST00000465552 ZNF784Q8NCA9 323 aaPredicted RBP12.71□□□□□ -0.37
CTNNB1-211ENST00000465552 BCL2L13Q9BXK5 485 aa12.71□□□□□ -0.37
CTNNB1-211ENST00000465552 LTBP1Q14766 1721 aa12.71□□□□□ -0.38
CTNNB1-211ENST00000465552 KLRG2A4D1S0 409 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms