RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 BRINP3Q76B58 766 aa22.58■■□□□ 1.2
TSPAN4-210ENST00000464987 CPDO75976 1380 aa22.58■■□□□ 1.2
TSPAN4-210ENST00000464987 ZSCAN23Q3MJ62 389 aa22.57■■□□□ 1.2
TSPAN4-210ENST00000464987 RUFY3Q7L099 469 aa22.57■■□□□ 1.2
TSPAN4-210ENST00000464987 DTNBO60941 627 aa22.57■■□□□ 1.2
TSPAN4-210ENST00000464987 PRPF40BQ6NWY9 871 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-210ENST00000464987 DDX54Q8TDD1 881 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-210ENST00000464987 LAMB4A4D0S4 1761 aa22.56■■□□□ 1.2
TSPAN4-210ENST00000464987 CASTP20810 708 aaKnown RBP22.56■■□□□ 1.2
TSPAN4-210ENST00000464987 UBE3BQ7Z3V4 1068 aa22.56■■□□□ 1.2
TSPAN4-210ENST00000464987 RUFY2Q8WXA3 655 aa22.55■■□□□ 1.2
TSPAN4-210ENST00000464987 LARGE1O95461 756 aa22.55■■□□□ 1.2
TSPAN4-210ENST00000464987 RFX5P48382 616 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-210ENST00000464987 NMIQ13287 307 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-210ENST00000464987 COL9A3Q14050 684 aaPredicted RBP22.54■■□□□ 1.2
TSPAN4-210ENST00000464987 EDC3Q96F86 508 aaKnown RBP22.54■■□□□ 1.2
TSPAN4-210ENST00000464987 PARP4Q9UKK3 1724 aaKnown RBP22.54■■□□□ 1.2
TSPAN4-210ENST00000464987 RPAP1Q9BWH6 1393 aaPredicted RBP22.54■■□□□ 1.2
TSPAN4-210ENST00000464987 ZNF445P59923 1031 aa22.54■■□□□ 1.2
TSPAN4-210ENST00000464987 NBPF26B4DH59 902 aa22.53■■□□□ 1.2
TSPAN4-210ENST00000464987 PTPN12Q05209 780 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-210ENST00000464987 NBPF14Q5TI25 921 aa22.53■■□□□ 1.2
TSPAN4-210ENST00000464987 NBPF10Q6P3W6 841 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-210ENST00000464987 NBPF15Q8N660 670 aa22.53■■□□□ 1.2
TSPAN4-210ENST00000464987 TMEM63CQ9P1W3 806 aa22.53■■□□□ 1.2
TSPAN4-210ENST00000464987 CCDC171Q6TFL3 1326 aa22.53■■□□□ 1.2
TSPAN4-210ENST00000464987 A0A0D9SFI3 127 aa22.53■■□□□ 1.2
TSPAN4-210ENST00000464987 NECTIN1Q15223 517 aa22.53■■□□□ 1.2
TSPAN4-210ENST00000464987 JAKMIP1Q96N16 626 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-210ENST00000464987 PRDM11Q9NQV5 511 aa22.53■■□□□ 1.2
TSPAN4-210ENST00000464987 A0A087WZG4 1122 aa22.52■■□□□ 1.2
TSPAN4-210ENST00000464987 TOM1L2Q6ZVM7 507 aa22.52■■□□□ 1.2
TSPAN4-210ENST00000464987 GDPD2Q9HCC8 539 aa22.52■■□□□ 1.2
TSPAN4-210ENST00000464987 NDUFB9Q9Y6M9 179 aa22.52■■□□□ 1.2
TSPAN4-210ENST00000464987 COPRSQ9NQ92 184 aa22.51■■□□□ 1.19
TSPAN4-210ENST00000464987 LIMCH1Q9UPQ0 1083 aa22.51■■□□□ 1.19
TSPAN4-210ENST00000464987 RBM8AQ9Y5S9 174 aaKnown RBP22.51■■□□□ 1.19
TSPAN4-210ENST00000464987 WDR17Q8IZU2 1322 aa22.51■■□□□ 1.19
TSPAN4-210ENST00000464987 TFCP2Q12800 502 aa22.5■■□□□ 1.19
TSPAN4-210ENST00000464987 FSD1Q9BTV5 496 aa22.5■■□□□ 1.19
TSPAN4-210ENST00000464987 DBNLQ9UJU6 430 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-210ENST00000464987 NASPP49321 788 aaPredicted RBP22.5■■□□□ 1.19
TSPAN4-210ENST00000464987 PRIM1P49642 420 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-210ENST00000464987 CASP7P55210 303 aa22.5■■□□□ 1.19
TSPAN4-210ENST00000464987 RABL6Q3YEC7 729 aaPredicted RBP22.5■■□□□ 1.19
TSPAN4-210ENST00000464987 UBR2Q8IWV8 1755 aa22.49■■□□□ 1.19
TSPAN4-210ENST00000464987 PLEKHG2Q9H7P9 1386 aa22.49■■□□□ 1.19
TSPAN4-210ENST00000464987 TTLL7Q6ZT98 887 aa22.49■■□□□ 1.19
TSPAN4-210ENST00000464987 PLBD2Q8NHP8 589 aa22.49■■□□□ 1.19
TSPAN4-210ENST00000464987 ZCRB1Q8TBF4 217 aaKnown RBP22.49■■□□□ 1.19
TSPAN4-210ENST00000464987 KCNB2Q92953 911 aa22.49■■□□□ 1.19
TSPAN4-210ENST00000464987 CHGBP05060 677 aa22.49■■□□□ 1.19
TSPAN4-210ENST00000464987 CREB3L3Q68CJ9 461 aa22.49■■□□□ 1.19
TSPAN4-210ENST00000464987 MAP4K1Q92918 833 aa22.49■■□□□ 1.19
TSPAN4-210ENST00000464987 SHANK3Q9BYB0 1731 aa22.48■■□□□ 1.19
TSPAN4-210ENST00000464987 TNNI3KQ59H18 835 aa22.48■■□□□ 1.19
TSPAN4-210ENST00000464987 ZNF589Q86UQ0 364 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-210ENST00000464987 ZSWIM6Q9HCJ5 1215 aa22.48■■□□□ 1.19
TSPAN4-210ENST00000464987 PDRG1Q9NUG6 133 aa22.48■■□□□ 1.19
TSPAN4-210ENST00000464987 TAF6LQ9Y6J9 622 aa22.48■■□□□ 1.19
TSPAN4-210ENST00000464987 FPGT-TNNI3KV9GXZ4 949 aa22.48■■□□□ 1.19
TSPAN4-210ENST00000464987 COL5A2P05997 1499 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-210ENST00000464987 PCDH11XQ9BZA7 1347 aa22.48■■□□□ 1.19
TSPAN4-210ENST00000464987 PCDH11YQ9BZA8 1340 aa22.48■■□□□ 1.19
TSPAN4-210ENST00000464987 A1BGP04217 495 aa22.47■■□□□ 1.19
TSPAN4-210ENST00000464987 RBSNQ9H1K0 784 aa22.47■■□□□ 1.19
TSPAN4-210ENST00000464987 NUP188Q5SRE5 1749 aa22.47■■□□□ 1.19
TSPAN4-210ENST00000464987 ERBB4Q15303 1308 aa22.47■■□□□ 1.19
TSPAN4-210ENST00000464987 CCDC83Q8IWF9 413 aa22.47■■□□□ 1.19
TSPAN4-210ENST00000464987 WDR33Q9C0J8 1336 aaKnown RBP22.46■■□□□ 1.19
TSPAN4-210ENST00000464987 SYCE3A1L190 88 aa22.46■■□□□ 1.19
TSPAN4-210ENST00000464987 GADD45BO75293 160 aaPredicted RBP22.46■■□□□ 1.19
TSPAN4-210ENST00000464987 ST3GAL1Q11201 340 aa22.46■■□□□ 1.19
TSPAN4-210ENST00000464987 KCNJ4P48050 445 aa22.46■■□□□ 1.19
TSPAN4-210ENST00000464987 VPS53Q5VIR6 699 aa22.46■■□□□ 1.19
TSPAN4-210ENST00000464987 LMBR1LQ6UX01 489 aa22.46■■□□□ 1.19
TSPAN4-210ENST00000464987 TJP1Q07157 1748 aa22.45■■□□□ 1.18
TSPAN4-210ENST00000464987 HIP1O00291 1037 aa22.45■■□□□ 1.18
TSPAN4-210ENST00000464987 SLC27A2O14975 620 aa22.45■■□□□ 1.18
TSPAN4-210ENST00000464987 SYT1P21579 422 aa22.45■■□□□ 1.18
TSPAN4-210ENST00000464987 DBNDD2Q9BQY9 259 aa22.45■■□□□ 1.18
TSPAN4-210ENST00000464987 SNRKQ9NRH2 765 aa22.45■■□□□ 1.18
TSPAN4-210ENST00000464987 CYP46A1Q9Y6A2 500 aa22.45■■□□□ 1.18
TSPAN4-210ENST00000464987 KCPQ6ZWJ8 1503 aa22.45■■□□□ 1.18
TSPAN4-210ENST00000464987 MED23Q9ULK4 1368 aa22.45■■□□□ 1.18
TSPAN4-210ENST00000464987 TM6SF1Q9BZW5 370 aa22.45■■□□□ 1.18
TSPAN4-210ENST00000464987 STRN4Q9NRL3 753 aa22.45■■□□□ 1.18
TSPAN4-210ENST00000464987 STRCQ7RTU9 1775 aa22.45■■□□□ 1.18
TSPAN4-210ENST00000464987 ABCA3Q99758 1704 aa22.44■■□□□ 1.18
TSPAN4-210ENST00000464987 SOS2Q07890 1332 aaPredicted RBP22.44■■□□□ 1.18
TSPAN4-210ENST00000464987 FOXO4P98177 505 aa22.44■■□□□ 1.18
TSPAN4-210ENST00000464987 USP48Q86UV5 1035 aa22.44■■□□□ 1.18
TSPAN4-210ENST00000464987 TCEANC2Q96MN5 208 aa22.44■■□□□ 1.18
TSPAN4-210ENST00000464987 CHMP3Q9Y3E7 222 aa22.44■■□□□ 1.18
TSPAN4-210ENST00000464987 CCDC9Q9Y3X0 531 aaKnown RBP22.44■■□□□ 1.18
TSPAN4-210ENST00000464987 COL15A1P39059 1388 aa22.44■■□□□ 1.18
TSPAN4-210ENST00000464987 ME3Q16798 604 aa22.43■■□□□ 1.18
TSPAN4-210ENST00000464987 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.43■■□□□ 1.18
TSPAN4-210ENST00000464987 ZKSCAN1P17029 563 aaPredicted RBP22.43■■□□□ 1.18
TSPAN4-210ENST00000464987 ZBTB3Q9H5J0 574 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms