RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 TRIM28Q13263 835 aaKnown RBP17.3■□□□□ 0.36
COMMD3-205ENST00000463688 ERFEQ4G0M1 354 aa17.3■□□□□ 0.36
COMMD3-205ENST00000463688 SUSD4Q5VX71 490 aa17.3■□□□□ 0.36
COMMD3-205ENST00000463688 CCDC24Q8N4L8 307 aa17.3■□□□□ 0.36
COMMD3-205ENST00000463688 NECTIN2Q92692 538 aa17.3■□□□□ 0.36
COMMD3-205ENST00000463688 TRMT112Q9UI30 125 aaKnown RBP17.3■□□□□ 0.36
COMMD3-205ENST00000463688 KIAA1551Q9HCM1 1747 aa17.3■□□□□ 0.36
COMMD3-205ENST00000463688 GLTPD2A6NH11 291 aa17.3■□□□□ 0.36
COMMD3-205ENST00000463688 BBOX1O75936 387 aa17.3■□□□□ 0.36
COMMD3-205ENST00000463688 RIC3Q7Z5B4 369 aa17.3■□□□□ 0.36
COMMD3-205ENST00000463688 VPS33BQ9H267 617 aa17.3■□□□□ 0.36
COMMD3-205ENST00000463688 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
COMMD3-205ENST00000463688 AFDNP55196 1824 aaKnown RBP17.29■□□□□ 0.36
COMMD3-205ENST00000463688 NTSR2O95665 410 aa17.29■□□□□ 0.36
COMMD3-205ENST00000463688 FKBP4Q02790 459 aaKnown RBP eCLIP17.29■□□□□ 0.36
COMMD3-205ENST00000463688 NLRP10Q86W26 655 aa17.29■□□□□ 0.36
COMMD3-205ENST00000463688 MYH16Q9H6N6 1097 aa17.29■□□□□ 0.36
COMMD3-205ENST00000463688 NFKBIEO00221 500 aa17.28■□□□□ 0.36
COMMD3-205ENST00000463688 VEGFAP15692 232 aaPredicted RBP17.28■□□□□ 0.36
COMMD3-205ENST00000463688 PROSER3Q2NL68 480 aa17.28■□□□□ 0.36
COMMD3-205ENST00000463688 NUTM1Q86Y26 1132 aa17.28■□□□□ 0.36
COMMD3-205ENST00000463688 C7orf43Q8WVR3 580 aa17.28■□□□□ 0.36
COMMD3-205ENST00000463688 BRCA1P38398 1863 aaKnown RBP17.27■□□□□ 0.36
COMMD3-205ENST00000463688 UBN2Q6ZU65 1347 aa17.27■□□□□ 0.36
COMMD3-205ENST00000463688 NEXNQ0ZGT2 675 aa17.27■□□□□ 0.35
COMMD3-205ENST00000463688 FSTL1Q12841 308 aa17.27■□□□□ 0.35
COMMD3-205ENST00000463688 DDX46Q7L014 1031 aaKnown RBP17.27■□□□□ 0.35
COMMD3-205ENST00000463688 SUPT20HQ8NEM7 779 aa17.27■□□□□ 0.35
COMMD3-205ENST00000463688 RBM46Q8TBY0 533 aaKnown RBP17.27■□□□□ 0.35
COMMD3-205ENST00000463688 JDP2Q8WYK2 163 aa17.27■□□□□ 0.35
COMMD3-205ENST00000463688 PSMD1Q99460 953 aa17.27■□□□□ 0.35
COMMD3-205ENST00000463688 SENP3-EIF4A1A0A087X0R7 540 aa17.26■□□□□ 0.35
COMMD3-205ENST00000463688 RASSF7Q02833 373 aa17.26■□□□□ 0.35
COMMD3-205ENST00000463688 ZNF219Q9P2Y4 722 aaPredicted RBP17.26■□□□□ 0.35
COMMD3-205ENST00000463688 IQCA1LA6NCM1 817 aa17.25■□□□□ 0.35
COMMD3-205ENST00000463688 KIF3CO14782 793 aa17.25■□□□□ 0.35
COMMD3-205ENST00000463688 ANXA1P04083 346 aa17.25■□□□□ 0.35
COMMD3-205ENST00000463688 KRT24Q2M2I5 525 aa17.25■□□□□ 0.35
COMMD3-205ENST00000463688 CCDC191Q8NCU4 936 aa17.25■□□□□ 0.35
COMMD3-205ENST00000463688 TWISTNBQ3B726 338 aaPredicted RBP17.24■□□□□ 0.35
COMMD3-205ENST00000463688 ISCA1Q9BUE6 129 aa17.24■□□□□ 0.35
COMMD3-205ENST00000463688 ELL2O00472 640 aaPredicted RBP17.23■□□□□ 0.35
COMMD3-205ENST00000463688 DLEC1Q9Y238 1755 aa17.23■□□□□ 0.35
COMMD3-205ENST00000463688 PPEF1O14829 653 aaPredicted RBP17.22■□□□□ 0.35
COMMD3-205ENST00000463688 HSPA6P17066 643 aa17.22■□□□□ 0.35
COMMD3-205ENST00000463688 FAM9BQ8IZU0 186 aa17.22■□□□□ 0.35
COMMD3-205ENST00000463688 C8orf58Q8NAV2 365 aa17.22■□□□□ 0.35
COMMD3-205ENST00000463688 SMC1BQ8NDV3 1235 aa17.22■□□□□ 0.35
COMMD3-205ENST00000463688 ABCC12Q96J65 1359 aa17.22■□□□□ 0.35
COMMD3-205ENST00000463688 APLP1P51693 650 aa17.21■□□□□ 0.35
COMMD3-205ENST00000463688 CCDC184Q52MB2 194 aa17.21■□□□□ 0.35
COMMD3-205ENST00000463688 KSR2Q6VAB6 950 aa17.21■□□□□ 0.35
COMMD3-205ENST00000463688 SYNE4Q8N205 404 aa17.21■□□□□ 0.35
COMMD3-205ENST00000463688 ZBTB38Q8NAP3 1195 aaPredicted RBP17.21■□□□□ 0.35
COMMD3-205ENST00000463688 RRAGCQ9HB90 399 aa17.21■□□□□ 0.35
COMMD3-205ENST00000463688 ATP6V0A2Q9Y487 856 aa17.21■□□□□ 0.35
COMMD3-205ENST00000463688 IARSP41252 1262 aaKnown RBP17.21■□□□□ 0.34
COMMD3-205ENST00000463688 SP8Q8IXZ3 490 aa17.21■□□□□ 0.34
COMMD3-205ENST00000463688 METTL22Q9BUU2 404 aaPredicted RBP17.21■□□□□ 0.34
COMMD3-205ENST00000463688 NMRK2Q9NPI5 230 aa17.21■□□□□ 0.34
COMMD3-205ENST00000463688 CWC25Q9NXE8 425 aaPredicted RBP17.21■□□□□ 0.34
COMMD3-205ENST00000463688 EIF6P56537 245 aaKnown RBP17.2■□□□□ 0.34
COMMD3-205ENST00000463688 GRAPQ13588 217 aa17.2■□□□□ 0.34
COMMD3-205ENST00000463688 SF3B3Q15393 1217 aaKnown RBP17.2■□□□□ 0.34
COMMD3-205ENST00000463688 GRAPLQ8TC17 118 aaPredicted RBP17.2■□□□□ 0.34
COMMD3-205ENST00000463688 CCER2I3L3R5 266 aa17.18■□□□□ 0.34
COMMD3-205ENST00000463688 IRS4O14654 1257 aaPredicted RBP17.18■□□□□ 0.34
COMMD3-205ENST00000463688 SLC4A2P04920 1241 aa17.18■□□□□ 0.34
COMMD3-205ENST00000463688 HCLS1P14317 486 aaPredicted RBP17.18■□□□□ 0.34
COMMD3-205ENST00000463688 CCDC152Q4G0S7 254 aa17.18■□□□□ 0.34
COMMD3-205ENST00000463688 LARGE2Q8N3Y3 721 aa17.18■□□□□ 0.34
COMMD3-205ENST00000463688 TSR2Q969E8 191 aaKnown RBP17.18■□□□□ 0.34
COMMD3-205ENST00000463688 ANKRD31Q8N7Z5 1873 aa17.18■□□□□ 0.34
COMMD3-205ENST00000463688 NUP98P52948 1817 aa17.17■□□□□ 0.34
COMMD3-205ENST00000463688 ATP5J2-PTCD1G3V325 749 aa17.17■□□□□ 0.34
COMMD3-205ENST00000463688 PCCAP05165 728 aaPredicted RBP17.17■□□□□ 0.34
COMMD3-205ENST00000463688 DPP8Q6V1X1 898 aaPredicted RBP17.17■□□□□ 0.34
COMMD3-205ENST00000463688 NIM1KQ8IY84 436 aa17.17■□□□□ 0.34
COMMD3-205ENST00000463688 FAM89AQ96GI7 184 aa17.17■□□□□ 0.34
COMMD3-205ENST00000463688 ZNF277Q9NRM2 450 aaPredicted RBP17.17■□□□□ 0.34
COMMD3-205ENST00000463688 PNMA8AQ86V59 439 aaPredicted RBP17.16■□□□□ 0.34
COMMD3-205ENST00000463688 GPC2Q8N158 579 aa17.16■□□□□ 0.34
COMMD3-205ENST00000463688 MPNDQ8N594 471 aa17.16■□□□□ 0.34
COMMD3-205ENST00000463688 ZNF428Q96B54 188 aa17.16■□□□□ 0.34
COMMD3-205ENST00000463688 L3MBTL3Q96JM7 780 aaPredicted RBP17.16■□□□□ 0.34
COMMD3-205ENST00000463688 MYD88Q99836 296 aa17.16■□□□□ 0.34
COMMD3-205ENST00000463688 ABCC4O15439 1325 aa17.16■□□□□ 0.34
COMMD3-205ENST00000463688 FANCIQ9NVI1 1328 aa17.16■□□□□ 0.34
COMMD3-205ENST00000463688 PI4KAP2A4QPH2 592 aa17.15■□□□□ 0.34
COMMD3-205ENST00000463688 FZD9O00144 591 aa17.15■□□□□ 0.34
COMMD3-205ENST00000463688 PDE8AO60658 829 aa17.15■□□□□ 0.34
COMMD3-205ENST00000463688 PI4KAP1Q8N8J0 262 aa17.15■□□□□ 0.34
COMMD3-205ENST00000463688 RTFDC1Q9BY42 306 aaPredicted RBP17.15■□□□□ 0.34
COMMD3-205ENST00000463688 PHAXQ9H814 394 aaKnown RBP17.15■□□□□ 0.34
COMMD3-205ENST00000463688 MAP3K2Q9Y2U5 619 aa17.15■□□□□ 0.34
COMMD3-205ENST00000463688 E9PSI1 815 aa17.14■□□□□ 0.33
COMMD3-205ENST00000463688 LMOD1P29536 600 aaPredicted RBP17.14■□□□□ 0.33
COMMD3-205ENST00000463688 TSPYL6Q8N831 410 aa17.14■□□□□ 0.33
COMMD3-205ENST00000463688 EYA3Q99504 573 aa17.14■□□□□ 0.33
COMMD3-205ENST00000463688 SALL2Q9Y467 1007 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms