RNA–Protein interactions for RNA: ENST00000462625.1

LIMK2-206, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 1,042 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-206ENST00000462625 PHAXQ9H814 394 aaKnown RBP29.8■■■□□ 2.36
LIMK2-206ENST00000462625 SBF1O95248 1867 aa29.8■■■□□ 2.36
LIMK2-206ENST00000462625 SLX4Q8IY92 1834 aa29.8■■■□□ 2.36
LIMK2-206ENST00000462625 ABCC12Q96J65 1359 aa29.78■■■□□ 2.36
LIMK2-206ENST00000462625 ALDH1B1P30837 517 aa29.78■■■□□ 2.36
LIMK2-206ENST00000462625 TNRC6CQ9HCJ0 1690 aaKnown RBP29.77■■■□□ 2.36
LIMK2-206ENST00000462625 SOGA3Q5TF21 947 aa29.77■■■□□ 2.36
LIMK2-206ENST00000462625 PRPF40BQ6NWY9 871 aaKnown RBP29.77■■■□□ 2.36
LIMK2-206ENST00000462625 RPGRQ92834 1020 aaKnown RBP29.77■■■□□ 2.36
LIMK2-206ENST00000462625 ZNF219Q9P2Y4 722 aaPredicted RBP29.77■■■□□ 2.36
LIMK2-206ENST00000462625 TRMT112Q9UI30 125 aaKnown RBP29.77■■■□□ 2.36
LIMK2-206ENST00000462625 CCDC88AQ3V6T2 1871 aa29.76■■■□□ 2.36
LIMK2-206ENST00000462625 C21orf2O43822 256 aa29.76■■■□□ 2.35
LIMK2-206ENST00000462625 EXOSC9Q06265 439 aaKnown RBP29.76■■■□□ 2.35
LIMK2-206ENST00000462625 NLRP3Q96P20 1036 aa29.76■■■□□ 2.35
LIMK2-206ENST00000462625 CRY2Q49AN0 593 aa29.75■■■□□ 2.35
LIMK2-206ENST00000462625 ADCY9O60503 1353 aa29.75■■■□□ 2.35
LIMK2-206ENST00000462625 SLC10A5Q5PT55 438 aa29.74■■■□□ 2.35
LIMK2-206ENST00000462625 C9orf131Q5VYM1 1079 aa29.74■■■□□ 2.35
LIMK2-206ENST00000462625 ISCA1Q9BUE6 129 aa29.74■■■□□ 2.35
LIMK2-206ENST00000462625 SPINK5Q9NQ38 1064 aaPredicted RBP29.74■■■□□ 2.35
LIMK2-206ENST00000462625 SH3TC1Q8TE82 1336 aa29.73■■■□□ 2.35
LIMK2-206ENST00000462625 ZNF521Q96K83 1311 aa29.73■■■□□ 2.35
LIMK2-206ENST00000462625 ATP5J2-PTCD1G3V325 749 aa29.73■■■□□ 2.35
LIMK2-206ENST00000462625 SLC4A2P04920 1241 aa29.73■■■□□ 2.35
LIMK2-206ENST00000462625 FER1L6Q2WGJ9 1857 aa29.73■■■□□ 2.35
LIMK2-206ENST00000462625 TCERG1O14776 1098 aaKnown RBP29.72■■■□□ 2.35
LIMK2-206ENST00000462625 VAMP4O75379 141 aa29.72■■■□□ 2.35
LIMK2-206ENST00000462625 TRIM28Q13263 835 aaKnown RBP29.72■■■□□ 2.35
LIMK2-206ENST00000462625 RBM17Q96I25 401 aaKnown RBP29.72■■■□□ 2.35
LIMK2-206ENST00000462625 RNF181Q9P0P0 153 aa29.72■■■□□ 2.35
LIMK2-206ENST00000462625 LMNB1P20700 586 aa29.7■■■□□ 2.35
LIMK2-206ENST00000462625 RASSF7Q02833 373 aa29.7■■■□□ 2.35
LIMK2-206ENST00000462625 HOXA10P31260 410 aaPredicted RBP29.69■■■□□ 2.34
LIMK2-206ENST00000462625 KSR2Q6VAB6 950 aa29.69■■■□□ 2.34
LIMK2-206ENST00000462625 MYD88Q99836 296 aa29.69■■■□□ 2.34
LIMK2-206ENST00000462625 GPBP1L1Q9HC44 474 aaPredicted RBP29.69■■■□□ 2.34
LIMK2-206ENST00000462625 LAMB2P55268 1798 aa29.69■■■□□ 2.34
LIMK2-206ENST00000462625 CCDC93Q567U6 631 aa29.68■■■□□ 2.34
LIMK2-206ENST00000462625 MIER1Q8N108 512 aa29.68■■■□□ 2.34
LIMK2-206ENST00000462625 CRAMP1Q96RY5 1269 aa29.68■■■□□ 2.34
LIMK2-206ENST00000462625 METTL22Q9BUU2 404 aaPredicted RBP29.68■■■□□ 2.34
LIMK2-206ENST00000462625 MAP3K2Q9Y2U5 619 aa29.68■■■□□ 2.34
LIMK2-206ENST00000462625 E9PSI1 815 aa29.67■■■□□ 2.34
LIMK2-206ENST00000462625 NEXNQ0ZGT2 675 aa29.67■■■□□ 2.34
LIMK2-206ENST00000462625 ZNF526Q8TF50 670 aaPredicted RBP29.67■■■□□ 2.34
LIMK2-206ENST00000462625 PI4KAP2A4QPH2 592 aa29.66■■■□□ 2.34
LIMK2-206ENST00000462625 NFKBIEO00221 500 aa29.66■■■□□ 2.34
LIMK2-206ENST00000462625 HCLS1P14317 486 aaPredicted RBP29.66■■■□□ 2.34
LIMK2-206ENST00000462625 PI4KAP1Q8N8J0 262 aa29.66■■■□□ 2.34
LIMK2-206ENST00000462625 CCDC191Q8NCU4 936 aa29.66■■■□□ 2.34
LIMK2-206ENST00000462625 C7orf43Q8WVR3 580 aa29.66■■■□□ 2.34
LIMK2-206ENST00000462625 TAOK3Q9H2K8 898 aa29.66■■■□□ 2.34
LIMK2-206ENST00000462625 DICER1Q9UPY3 1922 aaKnown RBP29.65■■■□□ 2.34
LIMK2-206ENST00000462625 HSP90B1P14625 803 aaKnown RBP29.65■■■□□ 2.34
LIMK2-206ENST00000462625 FAM89AQ96GI7 184 aa29.65■■■□□ 2.34
LIMK2-206ENST00000462625 LTBP3Q9NS15 1303 aa29.65■■■□□ 2.34
LIMK2-206ENST00000462625 FLIIQ13045 1269 aa29.64■■■□□ 2.34
LIMK2-206ENST00000462625 RTKN2Q8IZC4 609 aa29.64■■■□□ 2.34
LIMK2-206ENST00000462625 SYNE4Q8N205 404 aa29.64■■■□□ 2.34
LIMK2-206ENST00000462625 ZNF428Q96B54 188 aa29.64■■■□□ 2.34
LIMK2-206ENST00000462625 TMX4Q9H1E5 349 aaPredicted RBP29.64■■■□□ 2.34
LIMK2-206ENST00000462625 DDX60Q8IY21 1712 aaKnown RBP29.64■■■□□ 2.34
LIMK2-206ENST00000462625 ZC3H4Q9UPT8 1303 aaKnown RBP29.64■■■□□ 2.34
LIMK2-206ENST00000462625 CC2D2BQ6DHV5 1058 aa29.63■■■□□ 2.33
LIMK2-206ENST00000462625 C3orf67Q6ZVT6 689 aa29.63■■■□□ 2.33
LIMK2-206ENST00000462625 G2E3Q7L622 706 aa29.63■■■□□ 2.33
LIMK2-206ENST00000462625 ZBTB38Q8NAP3 1195 aaPredicted RBP29.63■■■□□ 2.33
LIMK2-206ENST00000462625 CWC25Q9NXE8 425 aaPredicted RBP29.63■■■□□ 2.33
LIMK2-206ENST00000462625 FKBP5Q13451 457 aaPredicted RBP29.62■■■□□ 2.33
LIMK2-206ENST00000462625 GRIPAP1Q4V328 841 aa29.61■■■□□ 2.33
LIMK2-206ENST00000462625 DDX46Q7L014 1031 aaKnown RBP29.61■■■□□ 2.33
LIMK2-206ENST00000462625 RTL5Q5HYW3 569 aaPredicted RBP29.6■■■□□ 2.33
LIMK2-206ENST00000462625 TIAM2Q8IVF5 1701 aa29.59■■■□□ 2.33
LIMK2-206ENST00000462625 IRS4O14654 1257 aaPredicted RBP29.59■■■□□ 2.33
LIMK2-206ENST00000462625 PPEF1O14829 653 aaPredicted RBP29.59■■■□□ 2.33
LIMK2-206ENST00000462625 FKBP4Q02790 459 aaKnown RBP eCLIP29.59■■■□□ 2.33
LIMK2-206ENST00000462625 SLFN5Q08AF3 891 aa29.59■■■□□ 2.33
LIMK2-206ENST00000462625 PCCAP05165 728 aaPredicted RBP29.58■■■□□ 2.33
LIMK2-206ENST00000462625 KDM2BQ8NHM5 1336 aa29.58■■■□□ 2.33
LIMK2-206ENST00000462625 BBOX1O75936 387 aa29.57■■■□□ 2.32
LIMK2-206ENST00000462625 ABCC4O15439 1325 aa29.56■■■□□ 2.32
LIMK2-206ENST00000462625 PRELPP51888 382 aa29.56■■■□□ 2.32
LIMK2-206ENST00000462625 SF3B3Q15393 1217 aaKnown RBP29.56■■■□□ 2.32
LIMK2-206ENST00000462625 DNAAF4Q8WXU2 420 aa29.56■■■□□ 2.32
LIMK2-206ENST00000462625 OLFM4Q6UX06 510 aa29.55■■■□□ 2.32
LIMK2-206ENST00000462625 IGKV5-2P06315 115 aa29.54■■■□□ 2.32
LIMK2-206ENST00000462625 TAF1P21675 1872 aa29.54■■■□□ 2.32
LIMK2-206ENST00000462625 GRAPQ13588 217 aa29.53■■■□□ 2.32
LIMK2-206ENST00000462625 GRAPLQ8TC17 118 aaPredicted RBP29.53■■■□□ 2.32
LIMK2-206ENST00000462625 PSMD1Q99460 953 aa29.53■■■□□ 2.32
LIMK2-206ENST00000462625 ATP6V0A2Q9Y487 856 aa29.53■■■□□ 2.32
LIMK2-206ENST00000462625 MYH3P11055 1940 aa29.52■■■□□ 2.32
LIMK2-206ENST00000462625 NEURL1BA8MQ27 555 aa29.52■■■□□ 2.32
LIMK2-206ENST00000462625 DPY19L2Q6NUT2 758 aa29.52■■■□□ 2.32
LIMK2-206ENST00000462625 TMC4Q7Z404 712 aa29.52■■■□□ 2.32
LIMK2-206ENST00000462625 CDCA7LQ96GN5 454 aa29.52■■■□□ 2.32
LIMK2-206ENST00000462625 PDE8AO60658 829 aa29.51■■■□□ 2.31
LIMK2-206ENST00000462625 CWF19L2Q2TBE0 894 aaKnown RBP29.51■■■□□ 2.31
LIMK2-206ENST00000462625 LINS1Q8NG48 757 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms