RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 RTL5Q5HYW3 569 aaPredicted RBP17.16■□□□□ 0.34
LRRC47-202ENST00000462356 C3orf67Q6ZVT6 689 aa17.16■□□□□ 0.34
LRRC47-202ENST00000462356 CDCA7LQ96GN5 454 aa17.16■□□□□ 0.34
LRRC47-202ENST00000462356 MASTLQ96GX5 879 aa17.16■□□□□ 0.34
LRRC47-202ENST00000462356 MYD88Q99836 296 aa17.16■□□□□ 0.34
LRRC47-202ENST00000462356 MYH16Q9H6N6 1097 aa17.16■□□□□ 0.34
LRRC47-202ENST00000462356 UTRNP46939 3433 aa17.15■□□□□ 0.34
LRRC47-202ENST00000462356 ARFGEF2Q9Y6D5 1785 aa17.15■□□□□ 0.34
LRRC47-202ENST00000462356 HCLS1P14317 486 aaPredicted RBP17.15■□□□□ 0.34
LRRC47-202ENST00000462356 RASSF7Q02833 373 aa17.15■□□□□ 0.34
LRRC47-202ENST00000462356 ZNF784Q8NCA9 323 aaPredicted RBP17.15■□□□□ 0.34
LRRC47-202ENST00000462356 ISCA1Q9BUE6 129 aa17.15■□□□□ 0.34
LRRC47-202ENST00000462356 TRMT112Q9UI30 125 aaKnown RBP17.15■□□□□ 0.34
LRRC47-202ENST00000462356 PDZRN3Q9UPQ7 1066 aa17.15■□□□□ 0.34
LRRC47-202ENST00000462356 SLX4Q8IY92 1834 aa17.14■□□□□ 0.34
LRRC47-202ENST00000462356 KLRG2A4D1S0 409 aaPredicted RBP17.14■□□□□ 0.33
LRRC47-202ENST00000462356 NPR1P16066 1061 aa17.14■□□□□ 0.33
LRRC47-202ENST00000462356 STYK1Q6J9G0 422 aa17.14■□□□□ 0.33
LRRC47-202ENST00000462356 PRPF40BQ6NWY9 871 aaKnown RBP17.14■□□□□ 0.33
LRRC47-202ENST00000462356 OLFM4Q6UX06 510 aa17.13■□□□□ 0.33
LRRC47-202ENST00000462356 ZNF526Q8TF50 670 aaPredicted RBP17.13■□□□□ 0.33
LRRC47-202ENST00000462356 JARID2Q92833 1246 aaPredicted RBP17.13■□□□□ 0.33
LRRC47-202ENST00000462356 CNKSR1Q969H4 720 aa17.13■□□□□ 0.33
LRRC47-202ENST00000462356 CHMP4AQ9BY43 222 aa17.13■□□□□ 0.33
LRRC47-202ENST00000462356 MAP3K2Q9Y2U5 619 aa17.13■□□□□ 0.33
LRRC47-202ENST00000462356 PI4KAP2A4QPH2 592 aa17.12■□□□□ 0.33
LRRC47-202ENST00000462356 PI4KAP1Q8N8J0 262 aa17.12■□□□□ 0.33
LRRC47-202ENST00000462356 FAM89AQ96GI7 184 aa17.12■□□□□ 0.33
LRRC47-202ENST00000462356 IBTKQ9P2D0 1353 aaPredicted RBP17.12■□□□□ 0.33
LRRC47-202ENST00000462356 DDX58O95786 925 aaKnown RBP17.11■□□□□ 0.33
LRRC47-202ENST00000462356 SLFN5Q08AF3 891 aa17.11■□□□□ 0.33
LRRC47-202ENST00000462356 C9orf131Q5VYM1 1079 aa17.11■□□□□ 0.33
LRRC47-202ENST00000462356 KSR2Q6VAB6 950 aa17.11■□□□□ 0.33
LRRC47-202ENST00000462356 SLC51AQ86UW1 340 aa17.11■□□□□ 0.33
LRRC47-202ENST00000462356 RPGRQ92834 1020 aaKnown RBP17.11■□□□□ 0.33
LRRC47-202ENST00000462356 NLRP3Q96P20 1036 aa17.11■□□□□ 0.33
LRRC47-202ENST00000462356 SH3TC1Q8TE82 1336 aa17.11■□□□□ 0.33
LRRC47-202ENST00000462356 PRELPP51888 382 aa17.1■□□□□ 0.33
LRRC47-202ENST00000462356 FLIIQ13045 1269 aa17.1■□□□□ 0.33
LRRC47-202ENST00000462356 CRY2Q49AN0 593 aa17.1■□□□□ 0.33
LRRC47-202ENST00000462356 SLC10A5Q5PT55 438 aa17.1■□□□□ 0.33
LRRC47-202ENST00000462356 METTL22Q9BUU2 404 aaPredicted RBP17.1■□□□□ 0.33
LRRC47-202ENST00000462356 ADCY9O60503 1353 aa17.1■□□□□ 0.33
LRRC47-202ENST00000462356 E9PSI1 815 aa17.09■□□□□ 0.33
LRRC47-202ENST00000462356 NFKBIEO00221 500 aa17.09■□□□□ 0.33
LRRC47-202ENST00000462356 FKBP5Q13451 457 aaPredicted RBP17.09■□□□□ 0.33
LRRC47-202ENST00000462356 RNF181Q9P0P0 153 aa17.09■□□□□ 0.33
LRRC47-202ENST00000462356 LAMB2P55268 1798 aa17.08■□□□□ 0.33
LRRC47-202ENST00000462356 CWF19L2Q2TBE0 894 aaKnown RBP17.08■□□□□ 0.32
LRRC47-202ENST00000462356 RBM17Q96I25 401 aaKnown RBP17.08■□□□□ 0.32
LRRC47-202ENST00000462356 IGKV5-2P06315 115 aa17.07■□□□□ 0.32
LRRC47-202ENST00000462356 ALDH1B1P30837 517 aa17.07■□□□□ 0.32
LRRC47-202ENST00000462356 TRIM28Q13263 835 aaKnown RBP17.07■□□□□ 0.32
LRRC47-202ENST00000462356 C7orf43Q8WVR3 580 aa17.07■□□□□ 0.32
LRRC47-202ENST00000462356 SBF1O95248 1867 aa17.07■□□□□ 0.32
LRRC47-202ENST00000462356 CCDC88AQ3V6T2 1871 aa17.07■□□□□ 0.32
LRRC47-202ENST00000462356 RIC1Q4ADV7 1423 aa17.06■□□□□ 0.32
LRRC47-202ENST00000462356 F6X3S4 739 aa17.06■□□□□ 0.32
LRRC47-202ENST00000462356 CWC25Q9NXE8 425 aaPredicted RBP17.06■□□□□ 0.32
LRRC47-202ENST00000462356 DDX60Q8IY21 1712 aaKnown RBP17.06■□□□□ 0.32
LRRC47-202ENST00000462356 TAF1P21675 1872 aa17.05■□□□□ 0.32
LRRC47-202ENST00000462356 RNF123Q5XPI4 1314 aa17.05■□□□□ 0.32
LRRC47-202ENST00000462356 IRS4O14654 1257 aaPredicted RBP17.05■□□□□ 0.32
LRRC47-202ENST00000462356 HOXA10P31260 410 aaPredicted RBP17.05■□□□□ 0.32
LRRC47-202ENST00000462356 HNRNPUQ00839 825 aaKnown RBP eCLIP17.05■□□□□ 0.32
LRRC47-202ENST00000462356 CCDC191Q8NCU4 936 aa17.05■□□□□ 0.32
LRRC47-202ENST00000462356 ABCC4O15439 1325 aa17.04■□□□□ 0.32
LRRC47-202ENST00000462356 FER1L6Q2WGJ9 1857 aa17.04■□□□□ 0.32
LRRC47-202ENST00000462356 NEXNQ0ZGT2 675 aa17.04■□□□□ 0.32
LRRC47-202ENST00000462356 CCDC93Q567U6 631 aa17.04■□□□□ 0.32
LRRC47-202ENST00000462356 TRMT2AQ8IZ69 625 aaKnown RBP17.04■□□□□ 0.32
LRRC47-202ENST00000462356 ZBTB38Q8NAP3 1195 aaPredicted RBP17.04■□□□□ 0.32
LRRC47-202ENST00000462356 DNAAF4Q8WXU2 420 aa17.04■□□□□ 0.32
LRRC47-202ENST00000462356 CCDC85AQ96PX6 553 aaPredicted RBP17.04■□□□□ 0.32
LRRC47-202ENST00000462356 CRAMP1Q96RY5 1269 aa17.04■□□□□ 0.32
LRRC47-202ENST00000462356 BCL2L13Q9BXK5 485 aa17.04■□□□□ 0.32
LRRC47-202ENST00000462356 NEURL1BA8MQ27 555 aa17.03■□□□□ 0.32
LRRC47-202ENST00000462356 PPEF1O14829 653 aaPredicted RBP17.03■□□□□ 0.32
LRRC47-202ENST00000462356 PCCAP05165 728 aaPredicted RBP17.03■□□□□ 0.32
LRRC47-202ENST00000462356 LMNB1P20700 586 aa17.03■□□□□ 0.32
LRRC47-202ENST00000462356 TAOK3Q9H2K8 898 aa17.03■□□□□ 0.32
LRRC47-202ENST00000462356 DDX46Q7L014 1031 aaKnown RBP17.02■□□□□ 0.32
LRRC47-202ENST00000462356 MRPL50Q8N5N7 158 aaKnown RBP17.02■□□□□ 0.32
LRRC47-202ENST00000462356 GPBP1L1Q9HC44 474 aaPredicted RBP17.02■□□□□ 0.32
LRRC47-202ENST00000462356 CACNA1FO60840 1977 aa17.02■□□□□ 0.31
LRRC47-202ENST00000462356 SOGA3Q5TF21 947 aa17.01■□□□□ 0.31
LRRC47-202ENST00000462356 SSH1Q8WYL5 1049 aa17.01■□□□□ 0.31
LRRC47-202ENST00000462356 ZNF277Q9NRM2 450 aaPredicted RBP17.01■□□□□ 0.31
LRRC47-202ENST00000462356 COL4A1P02462 1669 aa17.01■□□□□ 0.31
LRRC47-202ENST00000462356 SF3B3Q15393 1217 aaKnown RBP17■□□□□ 0.31
LRRC47-202ENST00000462356 SLC4A10Q6U841 1118 aa17■□□□□ 0.31
LRRC47-202ENST00000462356 SEC31BQ9NQW1 1179 aa17■□□□□ 0.31
LRRC47-202ENST00000462356 FKBP4Q02790 459 aaKnown RBP eCLIP16.99■□□□□ 0.31
LRRC47-202ENST00000462356 GRAPQ13588 217 aa16.99■□□□□ 0.31
LRRC47-202ENST00000462356 GCKRQ14397 625 aa16.99■□□□□ 0.31
LRRC47-202ENST00000462356 UBE3BQ7Z3V4 1068 aa16.99■□□□□ 0.31
LRRC47-202ENST00000462356 RTKN2Q8IZC4 609 aa16.99■□□□□ 0.31
LRRC47-202ENST00000462356 LINS1Q8NG48 757 aa16.99■□□□□ 0.31
LRRC47-202ENST00000462356 GRAPLQ8TC17 118 aaPredicted RBP16.99■□□□□ 0.31
LRRC47-202ENST00000462356 CELF1Q92879 486 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms