RNA–Protein interactions for RNA: ENST00000462307.5

SNX21-206, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-206ENST00000462307 HOXA10P31260 410 aaPredicted RBP20.94■□□□□ 0.94
SNX21-206ENST00000462307 ANKRD13DQ6ZTN6 518 aa20.94■□□□□ 0.94
SNX21-206ENST00000462307 C8orf58Q8NAV2 365 aa20.94■□□□□ 0.94
SNX21-206ENST00000462307 PLBD2Q8NHP8 589 aa20.94■□□□□ 0.94
SNX21-206ENST00000462307 TNRC6CQ9HCJ0 1690 aaKnown RBP20.93■□□□□ 0.94
SNX21-206ENST00000462307 UTP14AQ9BVJ6 771 aaKnown RBP20.93■□□□□ 0.94
SNX21-206ENST00000462307 RNF123Q5XPI4 1314 aa20.93■□□□□ 0.94
SNX21-206ENST00000462307 NLRP10Q86W26 655 aa20.92■□□□□ 0.94
SNX21-206ENST00000462307 ZNF219Q9P2Y4 722 aaPredicted RBP20.92■□□□□ 0.94
SNX21-206ENST00000462307 IL16Q14005 1332 aa20.92■□□□□ 0.94
SNX21-206ENST00000462307 CHMP4AQ9BY43 222 aa20.91■□□□□ 0.94
SNX21-206ENST00000462307 ELL2O00472 640 aaPredicted RBP20.9■□□□□ 0.94
SNX21-206ENST00000462307 TAOK3Q9H2K8 898 aa20.9■□□□□ 0.94
SNX21-206ENST00000462307 KDM2BQ8NHM5 1336 aa20.89■□□□□ 0.93
SNX21-206ENST00000462307 GLTPD2A6NH11 291 aa20.89■□□□□ 0.93
SNX21-206ENST00000462307 TSPYL6Q8N831 410 aa20.89■□□□□ 0.93
SNX21-206ENST00000462307 NLRP3Q96P20 1036 aa20.89■□□□□ 0.93
SNX21-206ENST00000462307 CRAMP1Q96RY5 1269 aa20.89■□□□□ 0.93
SNX21-206ENST00000462307 ISCA1Q9BUE6 129 aa20.89■□□□□ 0.93
SNX21-206ENST00000462307 NMRK2Q9NPI5 230 aa20.89■□□□□ 0.93
SNX21-206ENST00000462307 TRIM28Q13263 835 aaKnown RBP20.88■□□□□ 0.93
SNX21-206ENST00000462307 CCDC93Q567U6 631 aa20.88■□□□□ 0.93
SNX21-206ENST00000462307 WDR63Q8IWG1 891 aa20.88■□□□□ 0.93
SNX21-206ENST00000462307 CCDC30Q5VVM6 783 aa20.87■□□□□ 0.93
SNX21-206ENST00000462307 C3orf67Q6ZVT6 689 aa20.87■□□□□ 0.93
SNX21-206ENST00000462307 RTKN2Q8IZC4 609 aa20.87■□□□□ 0.93
SNX21-206ENST00000462307 PHAXQ9H814 394 aaKnown RBP20.87■□□□□ 0.93
SNX21-206ENST00000462307 SNED1Q8TER0 1413 aa20.87■□□□□ 0.93
SNX21-206ENST00000462307 SENP3-EIF4A1A0A087X0R7 540 aa20.86■□□□□ 0.93
SNX21-206ENST00000462307 TOMM70O94826 608 aa20.86■□□□□ 0.93
SNX21-206ENST00000462307 FKBP4Q02790 459 aaKnown RBP eCLIP20.86■□□□□ 0.93
SNX21-206ENST00000462307 CC2D2BQ6DHV5 1058 aa20.86■□□□□ 0.93
SNX21-206ENST00000462307 RPGRQ92834 1020 aaKnown RBP20.86■□□□□ 0.93
SNX21-206ENST00000462307 TSR2Q969E8 191 aaKnown RBP20.86■□□□□ 0.93
SNX21-206ENST00000462307 RBM17Q96I25 401 aaKnown RBP20.86■□□□□ 0.93
SNX21-206ENST00000462307 CACNA1FO60840 1977 aa20.86■□□□□ 0.93
SNX21-206ENST00000462307 TIAM2Q8IVF5 1701 aa20.86■□□□□ 0.93
SNX21-206ENST00000462307 OLFM4Q6UX06 510 aa20.85■□□□□ 0.93
SNX21-206ENST00000462307 SYNE4Q8N205 404 aa20.85■□□□□ 0.93
SNX21-206ENST00000462307 TRMT112Q9UI30 125 aaKnown RBP20.85■□□□□ 0.93
SNX21-206ENST00000462307 LAMB2P55268 1798 aa20.85■□□□□ 0.93
SNX21-206ENST00000462307 CEP350Q5VT06 3117 aa20.84■□□□□ 0.93
SNX21-206ENST00000462307 SH3TC1Q8TE82 1336 aa20.84■□□□□ 0.93
SNX21-206ENST00000462307 GRIPAP1Q4V328 841 aa20.84■□□□□ 0.93
SNX21-206ENST00000462307 RRAGCQ9HB90 399 aa20.84■□□□□ 0.93
SNX21-206ENST00000462307 DPY19L2Q6NUT2 758 aa20.83■□□□□ 0.93
SNX21-206ENST00000462307 FAM9BQ8IZU0 186 aa20.83■□□□□ 0.93
SNX21-206ENST00000462307 PSMD1Q99460 953 aa20.83■□□□□ 0.93
SNX21-206ENST00000462307 TWISTNBQ3B726 338 aaPredicted RBP20.82■□□□□ 0.92
SNX21-206ENST00000462307 RIC3Q7Z5B4 369 aa20.82■□□□□ 0.92
SNX21-206ENST00000462307 POTECB2RU33 542 aa20.81■□□□□ 0.92
SNX21-206ENST00000462307 ATP5J2-PTCD1G3V325 749 aa20.81■□□□□ 0.92
SNX21-206ENST00000462307 HCLS1P14317 486 aaPredicted RBP20.81■□□□□ 0.92
SNX21-206ENST00000462307 GOLGA2Q08379 1002 aa20.81■□□□□ 0.92
SNX21-206ENST00000462307 RBM46Q8TBY0 533 aaKnown RBP20.81■□□□□ 0.92
SNX21-206ENST00000462307 WDR90Q96KV7 1748 aa20.81■□□□□ 0.92
SNX21-206ENST00000462307 VEGFAP15692 232 aaPredicted RBP20.8■□□□□ 0.92
SNX21-206ENST00000462307 SALL2Q9Y467 1007 aaPredicted RBP20.8■□□□□ 0.92
SNX21-206ENST00000462307 DDX60Q8IY21 1712 aaKnown RBP20.8■□□□□ 0.92
SNX21-206ENST00000462307 BBOX1O75936 387 aa20.79■□□□□ 0.92
SNX21-206ENST00000462307 HSPA6P17066 643 aa20.79■□□□□ 0.92
SNX21-206ENST00000462307 SF3B3Q15393 1217 aaKnown RBP20.79■□□□□ 0.92
SNX21-206ENST00000462307 CCDC191Q8NCU4 936 aa20.79■□□□□ 0.92
SNX21-206ENST00000462307 FAM89AQ96GI7 184 aa20.79■□□□□ 0.92
SNX21-206ENST00000462307 ZNF277Q9NRM2 450 aaPredicted RBP20.79■□□□□ 0.92
SNX21-206ENST00000462307 TAF1P21675 1872 aa20.79■□□□□ 0.92
SNX21-206ENST00000462307 ABCC4O15439 1325 aa20.78■□□□□ 0.92
SNX21-206ENST00000462307 FANCIQ9NVI1 1328 aa20.78■□□□□ 0.92
SNX21-206ENST00000462307 PPEF1O14829 653 aaPredicted RBP20.78■□□□□ 0.92
SNX21-206ENST00000462307 VAMP4O75379 141 aa20.78■□□□□ 0.92
SNX21-206ENST00000462307 DDX58O95786 925 aaKnown RBP20.78■□□□□ 0.92
SNX21-206ENST00000462307 METTL22Q9BUU2 404 aaPredicted RBP20.78■□□□□ 0.92
SNX21-206ENST00000462307 SPINK5Q9NQ38 1064 aaPredicted RBP20.78■□□□□ 0.92
SNX21-206ENST00000462307 ATP6V0A2Q9Y487 856 aa20.78■□□□□ 0.92
SNX21-206ENST00000462307 IARSP41252 1262 aaKnown RBP20.77■□□□□ 0.92
SNX21-206ENST00000462307 KSR2Q6VAB6 950 aa20.77■□□□□ 0.92
SNX21-206ENST00000462307 ZBTB38Q8NAP3 1195 aaPredicted RBP20.77■□□□□ 0.92
SNX21-206ENST00000462307 STK31Q9BXU1 1019 aa20.77■□□□□ 0.92
SNX21-206ENST00000462307 FZD9O00144 591 aa20.76■□□□□ 0.91
SNX21-206ENST00000462307 SLC4A2P04920 1241 aa20.76■□□□□ 0.91
SNX21-206ENST00000462307 DDX46Q7L014 1031 aaKnown RBP20.76■□□□□ 0.91
SNX21-206ENST00000462307 SP8Q8IXZ3 490 aa20.76■□□□□ 0.91
SNX21-206ENST00000462307 C16orf71Q8IYS4 520 aaPredicted RBP20.76■□□□□ 0.91
SNX21-206ENST00000462307 ZNF521Q96K83 1311 aa20.76■□□□□ 0.91
SNX21-206ENST00000462307 DDNO94850 711 aaPredicted RBP20.75■□□□□ 0.91
SNX21-206ENST00000462307 FSTL1Q12841 308 aa20.75■□□□□ 0.91
SNX21-206ENST00000462307 GRAPQ13588 217 aa20.75■□□□□ 0.91
SNX21-206ENST00000462307 GRAPLQ8TC17 118 aaPredicted RBP20.75■□□□□ 0.91
SNX21-206ENST00000462307 MYD88Q99836 296 aa20.75■□□□□ 0.91
SNX21-206ENST00000462307 VPS33BQ9H267 617 aa20.75■□□□□ 0.91
SNX21-206ENST00000462307 PI4KAP2A4QPH2 592 aa20.74■□□□□ 0.91
SNX21-206ENST00000462307 IRS4O14654 1257 aaPredicted RBP20.74■□□□□ 0.91
SNX21-206ENST00000462307 G2E3Q7L622 706 aa20.74■□□□□ 0.91
SNX21-206ENST00000462307 SLC51AQ86UW1 340 aa20.74■□□□□ 0.91
SNX21-206ENST00000462307 PI4KAP1Q8N8J0 262 aa20.74■□□□□ 0.91
SNX21-206ENST00000462307 ZNF428Q96B54 188 aa20.74■□□□□ 0.91
SNX21-206ENST00000462307 RTFDC1Q9BY42 306 aaPredicted RBP20.74■□□□□ 0.91
SNX21-206ENST00000462307 MAP3K2Q9Y2U5 619 aa20.74■□□□□ 0.91
SNX21-206ENST00000462307 PCCAP05165 728 aaPredicted RBP20.73■□□□□ 0.91
SNX21-206ENST00000462307 EXOSC9Q06265 439 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms