RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 ZSCAN30Q86W11 494 aa13.63□□□□□ -0.23
COPS7B-217ENST00000461350 PLBD2Q8NHP8 589 aa13.63□□□□□ -0.23
COPS7B-217ENST00000461350 IL1RAPL2Q9NP60 686 aa13.63□□□□□ -0.23
COPS7B-217ENST00000461350 TPM2P07951 284 aa13.62□□□□□ -0.23
COPS7B-217ENST00000461350 RABEP1Q15276 862 aa13.62□□□□□ -0.23
COPS7B-217ENST00000461350 BICC1Q9H694 974 aaKnown RBP13.62□□□□□ -0.23
COPS7B-217ENST00000461350 ARFGEF2Q9Y6D5 1785 aa13.62□□□□□ -0.23
COPS7B-217ENST00000461350 GSPT1P15170 499 aaKnown RBP13.62□□□□□ -0.23
COPS7B-217ENST00000461350 VPS72Q15906 364 aa13.62□□□□□ -0.23
COPS7B-217ENST00000461350 LRRCC1Q9C099 1032 aa13.62□□□□□ -0.23
COPS7B-217ENST00000461350 POLA2Q14181 598 aa13.61□□□□□ -0.23
COPS7B-217ENST00000461350 FAM182BQ5T319 152 aa13.61□□□□□ -0.23
COPS7B-217ENST00000461350 FNBP4Q8N3X1 1017 aaPredicted RBP13.61□□□□□ -0.23
COPS7B-217ENST00000461350 PPP1R9BQ96SB3 815 aa13.61□□□□□ -0.23
COPS7B-217ENST00000461350 PA2G4Q9UQ80 394 aaKnown RBP13.61□□□□□ -0.23
COPS7B-217ENST00000461350 IBTKQ9P2D0 1353 aaPredicted RBP13.61□□□□□ -0.23
COPS7B-217ENST00000461350 UBE3BQ7Z3V4 1068 aa13.61□□□□□ -0.23
COPS7B-217ENST00000461350 AFDNP55196 1824 aaKnown RBP13.61□□□□□ -0.23
COPS7B-217ENST00000461350 AK9Q5TCS8 1911 aa13.61□□□□□ -0.23
COPS7B-217ENST00000461350 NUCB2P80303 420 aa13.61□□□□□ -0.23
COPS7B-217ENST00000461350 EPHA10Q5JZY3 1008 aa13.61□□□□□ -0.23
COPS7B-217ENST00000461350 SPATA31A6Q5VVP1 1343 aa13.61□□□□□ -0.23
COPS7B-217ENST00000461350 STARD3NLO95772 234 aa13.6□□□□□ -0.23
COPS7B-217ENST00000461350 PKNOX2Q96KN3 472 aa13.6□□□□□ -0.23
COPS7B-217ENST00000461350 A0A087WZG4 1122 aa13.6□□□□□ -0.23
COPS7B-217ENST00000461350 EP400Q96L91 3159 aa13.6□□□□□ -0.23
COPS7B-217ENST00000461350 UTYO14607 1347 aa13.59□□□□□ -0.23
COPS7B-217ENST00000461350 CYP19A1P11511 503 aaPredicted RBP13.59□□□□□ -0.23
COPS7B-217ENST00000461350 CLEC17AQ6ZS10 378 aa13.59□□□□□ -0.23
COPS7B-217ENST00000461350 KLHDC4Q8TBB5 520 aa13.59□□□□□ -0.23
COPS7B-217ENST00000461350 ZMYND15Q9H091 742 aa13.59□□□□□ -0.23
COPS7B-217ENST00000461350 ZBTB1Q9Y2K1 713 aa13.59□□□□□ -0.23
COPS7B-217ENST00000461350 TTC22Q5TAA0 569 aa13.59□□□□□ -0.23
COPS7B-217ENST00000461350 PTF1AQ7RTS3 328 aa13.59□□□□□ -0.23
COPS7B-217ENST00000461350 TEX13AQ9BXU3 409 aaPredicted RBP13.59□□□□□ -0.23
COPS7B-217ENST00000461350 OS9Q13438 667 aaPredicted RBP13.58□□□□□ -0.24
COPS7B-217ENST00000461350 PKP1Q13835 747 aa13.58□□□□□ -0.24
COPS7B-217ENST00000461350 ZSCAN23Q3MJ62 389 aa13.58□□□□□ -0.24
COPS7B-217ENST00000461350 NUTM1Q86Y26 1132 aa13.58□□□□□ -0.24
COPS7B-217ENST00000461350 PDE1AP54750 535 aa13.58□□□□□ -0.24
COPS7B-217ENST00000461350 MTX1Q13505 466 aa13.58□□□□□ -0.24
COPS7B-217ENST00000461350 SIL1Q9H173 461 aa13.58□□□□□ -0.24
COPS7B-217ENST00000461350 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.57□□□□□ -0.24
COPS7B-217ENST00000461350 AFF2P51816 1311 aa13.57□□□□□ -0.24
COPS7B-217ENST00000461350 RHPN1Q8TCX5 695 aa13.57□□□□□ -0.24
COPS7B-217ENST00000461350 PRPF40AO75400 957 aaKnown RBP13.57□□□□□ -0.24
COPS7B-217ENST00000461350 KCNQ4P56696 695 aa13.57□□□□□ -0.24
COPS7B-217ENST00000461350 CASC1Q6TDU7 716 aa13.57□□□□□ -0.24
COPS7B-217ENST00000461350 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.57□□□□□ -0.24
COPS7B-217ENST00000461350 USP26Q9BXU7 913 aa13.57□□□□□ -0.24
COPS7B-217ENST00000461350 NUP188Q5SRE5 1749 aa13.56□□□□□ -0.24
COPS7B-217ENST00000461350 ST18O60284 1047 aa13.56□□□□□ -0.24
COPS7B-217ENST00000461350 ATP6V1AP38606 617 aa13.56□□□□□ -0.24
COPS7B-217ENST00000461350 ZNF445P59923 1031 aa13.56□□□□□ -0.24
COPS7B-217ENST00000461350 LMBRD1Q9NUN5 540 aa13.56□□□□□ -0.24
COPS7B-217ENST00000461350 OFD1O75665 1012 aa13.56□□□□□ -0.24
COPS7B-217ENST00000461350 SDSP20132 328 aa13.56□□□□□ -0.24
COPS7B-217ENST00000461350 CWC25Q9NXE8 425 aaPredicted RBP13.56□□□□□ -0.24
COPS7B-217ENST00000461350 HDAC5Q9UQL6 1122 aa13.56□□□□□ -0.24
COPS7B-217ENST00000461350 LOC102724428A0A0B4J2F2 783 aa13.55□□□□□ -0.24
COPS7B-217ENST00000461350 MX1P20591 662 aa13.55□□□□□ -0.24
COPS7B-217ENST00000461350 SIK1P57059 783 aa13.55□□□□□ -0.24
COPS7B-217ENST00000461350 HLFQ16534 295 aa13.55□□□□□ -0.24
COPS7B-217ENST00000461350 KIF6Q6ZMV9 814 aa13.55□□□□□ -0.24
COPS7B-217ENST00000461350 ZGPATQ8N5A5 531 aaKnown RBP13.55□□□□□ -0.24
COPS7B-217ENST00000461350 RBM27Q9P2N5 1060 aaKnown RBP13.55□□□□□ -0.24
COPS7B-217ENST00000461350 TBC1D2BQ9UPU7 963 aa13.55□□□□□ -0.24
COPS7B-217ENST00000461350 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.55□□□□□ -0.24
COPS7B-217ENST00000461350 ITPK1Q13572 414 aa13.55□□□□□ -0.24
COPS7B-217ENST00000461350 FOXD4L5Q5VV16 416 aaPredicted RBP13.55□□□□□ -0.24
COPS7B-217ENST00000461350 FOXD4L4Q8WXT5 416 aaPredicted RBP13.55□□□□□ -0.24
COPS7B-217ENST00000461350 RBSNQ9H1K0 784 aa13.55□□□□□ -0.24
COPS7B-217ENST00000461350 SALL3Q9BXA9 1300 aa13.55□□□□□ -0.24
COPS7B-217ENST00000461350 RAB11FIP3O75154 756 aa13.54□□□□□ -0.24
COPS7B-217ENST00000461350 GPTP24298 496 aa13.54□□□□□ -0.24
COPS7B-217ENST00000461350 CASP7P55210 303 aa13.54□□□□□ -0.24
COPS7B-217ENST00000461350 KIF1BPQ96EK5 621 aa13.54□□□□□ -0.24
COPS7B-217ENST00000461350 TJP1Q07157 1748 aa13.54□□□□□ -0.24
COPS7B-217ENST00000461350 PALLDQ8WX93 1383 aa13.54□□□□□ -0.24
COPS7B-217ENST00000461350 CWC22Q9HCG8 908 aaKnown RBP13.54□□□□□ -0.24
COPS7B-217ENST00000461350 CHMP3Q9Y3E7 222 aa13.54□□□□□ -0.24
COPS7B-217ENST00000461350 R3HCC1Q9Y3T6 440 aaKnown RBP13.54□□□□□ -0.24
COPS7B-217ENST00000461350 GJD4Q96KN9 370 aaPredicted RBP13.54□□□□□ -0.24
COPS7B-217ENST00000461350 TCIRG1Q13488 830 aa13.53□□□□□ -0.24
COPS7B-217ENST00000461350 H7C1W4 665 aa13.53□□□□□ -0.24
COPS7B-217ENST00000461350 CYP2E1P05181 493 aaPredicted RBP13.53□□□□□ -0.24
COPS7B-217ENST00000461350 RBM10P98175 930 aaKnown RBP13.53□□□□□ -0.24
COPS7B-217ENST00000461350 LMBR1LQ6UX01 489 aa13.53□□□□□ -0.24
COPS7B-217ENST00000461350 PDCL3Q9H2J4 239 aa13.53□□□□□ -0.24
COPS7B-217ENST00000461350 CRKLP46109 303 aaKnown RBP13.52□□□□□ -0.24
COPS7B-217ENST00000461350 SYNE4Q8N205 404 aa13.52□□□□□ -0.24
COPS7B-217ENST00000461350 CCDC191Q8NCU4 936 aa13.52□□□□□ -0.24
COPS7B-217ENST00000461350 CHAMP1Q96JM3 812 aa13.52□□□□□ -0.24
COPS7B-217ENST00000461350 MAP3K15Q6ZN16 1313 aa13.52□□□□□ -0.24
COPS7B-217ENST00000461350 MAP4K4O95819 1239 aaPredicted RBP13.52□□□□□ -0.24
COPS7B-217ENST00000461350 HSP90AB4PQ58FF6 505 aa13.52□□□□□ -0.24
COPS7B-217ENST00000461350 ISCA1Q9BUE6 129 aa13.52□□□□□ -0.24
COPS7B-217ENST00000461350 OSBPL3Q9H4L5 887 aa13.52□□□□□ -0.24
COPS7B-217ENST00000461350 SASH1O94885 1247 aa13.52□□□□□ -0.25
COPS7B-217ENST00000461350 REC8O95072 547 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms