RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 PRPF40BQ6NWY9 871 aaKnown RBP29.01■■■□□ 2.23
TRAF4-207ENST00000461195 C21orf2O43822 256 aa29■■■□□ 2.23
TRAF4-207ENST00000461195 TWISTNBQ3B726 338 aaPredicted RBP29■■■□□ 2.23
TRAF4-207ENST00000461195 NLRP10Q86W26 655 aa29■■■□□ 2.23
TRAF4-207ENST00000461195 ZNF219Q9P2Y4 722 aaPredicted RBP29■■■□□ 2.23
TRAF4-207ENST00000461195 RNF123Q5XPI4 1314 aa28.99■■■□□ 2.23
TRAF4-207ENST00000461195 CCER2I3L3R5 266 aa28.99■■■□□ 2.23
TRAF4-207ENST00000461195 PHAXQ9H814 394 aaKnown RBP28.99■■■□□ 2.23
TRAF4-207ENST00000461195 KIF3CO14782 793 aa28.98■■■□□ 2.23
TRAF4-207ENST00000461195 RASSF7Q02833 373 aa28.98■■■□□ 2.23
TRAF4-207ENST00000461195 GOLGA2Q08379 1002 aa28.98■■■□□ 2.23
TRAF4-207ENST00000461195 CRY2Q49AN0 593 aa28.98■■■□□ 2.23
TRAF4-207ENST00000461195 RNF181Q9P0P0 153 aa28.97■■■□□ 2.23
TRAF4-207ENST00000461195 FER1L6Q2WGJ9 1857 aa28.96■■■□□ 2.23
TRAF4-207ENST00000461195 ALDH1B1P30837 517 aa28.96■■■□□ 2.23
TRAF4-207ENST00000461195 SOGA3Q5TF21 947 aa28.96■■■□□ 2.23
TRAF4-207ENST00000461195 IFFO2Q5TF58 517 aa28.96■■■□□ 2.23
TRAF4-207ENST00000461195 RIC3Q7Z5B4 369 aa28.96■■■□□ 2.23
TRAF4-207ENST00000461195 STK31Q9BXU1 1019 aa28.96■■■□□ 2.23
TRAF4-207ENST00000461195 NFKBIEO00221 500 aa28.95■■■□□ 2.22
TRAF4-207ENST00000461195 SLC10A5Q5PT55 438 aa28.95■■■□□ 2.22
TRAF4-207ENST00000461195 RPGRQ92834 1020 aaKnown RBP28.95■■■□□ 2.22
TRAF4-207ENST00000461195 ISCA1Q9BUE6 129 aa28.95■■■□□ 2.22
TRAF4-207ENST00000461195 TRMT112Q9UI30 125 aaKnown RBP28.95■■■□□ 2.22
TRAF4-207ENST00000461195 CCDC88AQ3V6T2 1871 aa28.94■■■□□ 2.22
TRAF4-207ENST00000461195 LMNB1P20700 586 aa28.94■■■□□ 2.22
TRAF4-207ENST00000461195 NLRP3Q96P20 1036 aa28.94■■■□□ 2.22
TRAF4-207ENST00000461195 MYH16Q9H6N6 1097 aa28.94■■■□□ 2.22
TRAF4-207ENST00000461195 SPINK5Q9NQ38 1064 aaPredicted RBP28.94■■■□□ 2.22
TRAF4-207ENST00000461195 DDX58O95786 925 aaKnown RBP28.93■■■□□ 2.22
TRAF4-207ENST00000461195 SH3TC1Q8TE82 1336 aa28.93■■■□□ 2.22
TRAF4-207ENST00000461195 ATP5J2-PTCD1G3V325 749 aa28.92■■■□□ 2.22
TRAF4-207ENST00000461195 HOXA10P31260 410 aaPredicted RBP28.92■■■□□ 2.22
TRAF4-207ENST00000461195 C7orf43Q8WVR3 580 aa28.92■■■□□ 2.22
TRAF4-207ENST00000461195 TCERG1O14776 1098 aaKnown RBP28.91■■■□□ 2.22
TRAF4-207ENST00000461195 EXOSC9Q06265 439 aaKnown RBP28.91■■■□□ 2.22
TRAF4-207ENST00000461195 TRIM28Q13263 835 aaKnown RBP28.91■■■□□ 2.22
TRAF4-207ENST00000461195 ZNF521Q96K83 1311 aa28.91■■■□□ 2.22
TRAF4-207ENST00000461195 C3orf67Q6ZVT6 689 aa28.9■■■□□ 2.22
TRAF4-207ENST00000461195 RBM17Q96I25 401 aaKnown RBP28.9■■■□□ 2.22
TRAF4-207ENST00000461195 LTBP3Q9NS15 1303 aa28.9■■■□□ 2.22
TRAF4-207ENST00000461195 LAMB2P55268 1798 aa28.89■■■□□ 2.22
TRAF4-207ENST00000461195 VAMP4O75379 141 aa28.89■■■□□ 2.22
TRAF4-207ENST00000461195 PRELPP51888 382 aa28.89■■■□□ 2.22
TRAF4-207ENST00000461195 CCDC93Q567U6 631 aa28.89■■■□□ 2.22
TRAF4-207ENST00000461195 SYNE4Q8N205 404 aa28.89■■■□□ 2.22
TRAF4-207ENST00000461195 TAOK3Q9H2K8 898 aa28.89■■■□□ 2.22
TRAF4-207ENST00000461195 CACNA1FO60840 1977 aa28.89■■■□□ 2.22
TRAF4-207ENST00000461195 SLC4A2P04920 1241 aa28.88■■■□□ 2.21
TRAF4-207ENST00000461195 HCLS1P14317 486 aaPredicted RBP28.88■■■□□ 2.21
TRAF4-207ENST00000461195 ZNF428Q96B54 188 aa28.88■■■□□ 2.21
TRAF4-207ENST00000461195 CRAMP1Q96RY5 1269 aa28.88■■■□□ 2.21
TRAF4-207ENST00000461195 ZC3H4Q9UPT8 1303 aaKnown RBP28.88■■■□□ 2.21
TRAF4-207ENST00000461195 MYD88Q99836 296 aa28.87■■■□□ 2.21
TRAF4-207ENST00000461195 DIEXFQ68CQ4 756 aaKnown RBP28.86■■■□□ 2.21
TRAF4-207ENST00000461195 METTL22Q9BUU2 404 aaPredicted RBP28.86■■■□□ 2.21
TRAF4-207ENST00000461195 DICER1Q9UPY3 1922 aaKnown RBP28.86■■■□□ 2.21
TRAF4-207ENST00000461195 TIAM2Q8IVF5 1701 aa28.86■■■□□ 2.21
TRAF4-207ENST00000461195 DDX60Q8IY21 1712 aaKnown RBP28.86■■■□□ 2.21
TRAF4-207ENST00000461195 KSR2Q6VAB6 950 aa28.85■■■□□ 2.21
TRAF4-207ENST00000461195 FAM89AQ96GI7 184 aa28.85■■■□□ 2.21
TRAF4-207ENST00000461195 MAP3K2Q9Y2U5 619 aa28.85■■■□□ 2.21
TRAF4-207ENST00000461195 G2E3Q7L622 706 aa28.84■■■□□ 2.21
TRAF4-207ENST00000461195 RTKN2Q8IZC4 609 aa28.84■■■□□ 2.21
TRAF4-207ENST00000461195 PI4KAP2A4QPH2 592 aa28.83■■■□□ 2.21
TRAF4-207ENST00000461195 OLFM4Q6UX06 510 aa28.83■■■□□ 2.21
TRAF4-207ENST00000461195 PI4KAP1Q8N8J0 262 aa28.83■■■□□ 2.21
TRAF4-207ENST00000461195 CCDC191Q8NCU4 936 aa28.83■■■□□ 2.21
TRAF4-207ENST00000461195 TOMM70O94826 608 aa28.82■■■□□ 2.2
TRAF4-207ENST00000461195 FKBP4Q02790 459 aaKnown RBP eCLIP28.82■■■□□ 2.2
TRAF4-207ENST00000461195 CC2D2BQ6DHV5 1058 aa28.82■■■□□ 2.2
TRAF4-207ENST00000461195 NMRK2Q9NPI5 230 aa28.82■■■□□ 2.2
TRAF4-207ENST00000461195 KDM2BQ8NHM5 1336 aa28.81■■■□□ 2.2
TRAF4-207ENST00000461195 PPEF1O14829 653 aaPredicted RBP28.81■■■□□ 2.2
TRAF4-207ENST00000461195 ZBTB38Q8NAP3 1195 aaPredicted RBP28.81■■■□□ 2.2
TRAF4-207ENST00000461195 ABCC4O15439 1325 aa28.8■■■□□ 2.2
TRAF4-207ENST00000461195 APLP1P51693 650 aa28.8■■■□□ 2.2
TRAF4-207ENST00000461195 FLIIQ13045 1269 aa28.8■■■□□ 2.2
TRAF4-207ENST00000461195 RTL5Q5HYW3 569 aaPredicted RBP28.8■■■□□ 2.2
TRAF4-207ENST00000461195 CWC25Q9NXE8 425 aaPredicted RBP28.8■■■□□ 2.2
TRAF4-207ENST00000461195 IRS4O14654 1257 aaPredicted RBP28.79■■■□□ 2.2
TRAF4-207ENST00000461195 NEXNQ0ZGT2 675 aa28.79■■■□□ 2.2
TRAF4-207ENST00000461195 DDX46Q7L014 1031 aaKnown RBP28.79■■■□□ 2.2
TRAF4-207ENST00000461195 E9PSI1 815 aa28.78■■■□□ 2.2
TRAF4-207ENST00000461195 GRIPAP1Q4V328 841 aa28.78■■■□□ 2.2
TRAF4-207ENST00000461195 SNED1Q8TER0 1413 aa28.77■■■□□ 2.2
TRAF4-207ENST00000461195 PCCAP05165 728 aaPredicted RBP28.77■■■□□ 2.2
TRAF4-207ENST00000461195 HSP90B1P14625 803 aaKnown RBP28.77■■■□□ 2.2
TRAF4-207ENST00000461195 FKBP5Q13451 457 aaPredicted RBP28.77■■■□□ 2.2
TRAF4-207ENST00000461195 MIER1Q8N108 512 aa28.77■■■□□ 2.2
TRAF4-207ENST00000461195 BBOX1O75936 387 aa28.76■■■□□ 2.19
TRAF4-207ENST00000461195 SF3B3Q15393 1217 aaKnown RBP28.76■■■□□ 2.19
TRAF4-207ENST00000461195 TMX4Q9H1E5 349 aaPredicted RBP28.76■■■□□ 2.19
TRAF4-207ENST00000461195 GLTPD2A6NH11 291 aa28.75■■■□□ 2.19
TRAF4-207ENST00000461195 IGKV5-2P06315 115 aa28.75■■■□□ 2.19
TRAF4-207ENST00000461195 PSMD1Q99460 953 aa28.75■■■□□ 2.19
TRAF4-207ENST00000461195 ZNF277Q9NRM2 450 aaPredicted RBP28.75■■■□□ 2.19
TRAF4-207ENST00000461195 ATP6V0A2Q9Y487 856 aa28.75■■■□□ 2.19
TRAF4-207ENST00000461195 TAF1P21675 1872 aa28.74■■■□□ 2.19
TRAF4-207ENST00000461195 SLFN5Q08AF3 891 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms