RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 CEP63Q96MT8 703 aa6.54□□□□□ -1.36
RFC4-211ENST00000460408 KCNH4Q9UQ05 1017 aa6.54□□□□□ -1.36
RFC4-211ENST00000460408 LILRB5O75023 590 aa6.53□□□□□ -1.36
RFC4-211ENST00000460408 ELNP15502 786 aa6.53□□□□□ -1.36
RFC4-211ENST00000460408 PSMA6P60900 246 aaKnown RBP6.53□□□□□ -1.36
RFC4-211ENST00000460408 TYRO3Q06418 890 aa6.53□□□□□ -1.36
RFC4-211ENST00000460408 TRAPPC3LQ5T215 181 aa6.53□□□□□ -1.36
RFC4-211ENST00000460408 KRTAP4-12Q9BQ66 201 aa6.53□□□□□ -1.36
RFC4-211ENST00000460408 A0A0A0MRY4 1105 aa6.52□□□□□ -1.37
RFC4-211ENST00000460408 USP17L5A8MUK1 530 aa6.52□□□□□ -1.37
RFC4-211ENST00000460408 ZBTB7BO15156 539 aaPredicted RBP6.52□□□□□ -1.37
RFC4-211ENST00000460408 LRP8Q14114 963 aa6.52□□□□□ -1.37
RFC4-211ENST00000460408 TXNRD3Q86VQ6 643 aa6.52□□□□□ -1.37
RFC4-211ENST00000460408 TRIM50Q86XT4 487 aa6.52□□□□□ -1.37
RFC4-211ENST00000460408 LENG1Q96BZ8 264 aaPredicted RBP6.52□□□□□ -1.37
RFC4-211ENST00000460408 HSH2DQ96JZ2 352 aa6.52□□□□□ -1.37
RFC4-211ENST00000460408 PHACTR1Q9C0D0 580 aa6.52□□□□□ -1.37
RFC4-211ENST00000460408 TFIP11Q9UBB9 837 aaKnown RBP6.52□□□□□ -1.37
RFC4-211ENST00000460408 MAFBQ9Y5Q3 323 aaPredicted RBP6.52□□□□□ -1.37
RFC4-211ENST00000460408 SFI1A8K8P3 1242 aa6.51□□□□□ -1.37
RFC4-211ENST00000460408 NRG1Q02297 640 aaPredicted RBP6.51□□□□□ -1.37
RFC4-211ENST00000460408 ILDR2Q71H61 639 aa6.51□□□□□ -1.37
RFC4-211ENST00000460408 NBPF11Q86T75 865 aa6.51□□□□□ -1.37
RFC4-211ENST00000460408 DEPDC4Q8N2C3 294 aa6.51□□□□□ -1.37
RFC4-211ENST00000460408 ZNF280CQ8ND82 737 aa6.51□□□□□ -1.37
RFC4-211ENST00000460408 SUSD3Q96L08 255 aa6.51□□□□□ -1.37
RFC4-211ENST00000460408 TSPAN10Q9H1Z9 355 aaPredicted RBP6.51□□□□□ -1.37
RFC4-211ENST00000460408 HCN4Q9Y3Q4 1203 aa6.51□□□□□ -1.37
RFC4-211ENST00000460408 M0R2N6 131 aa6.5□□□□□ -1.37
RFC4-211ENST00000460408 ATP9BO43861 1147 aa6.5□□□□□ -1.37
RFC4-211ENST00000460408 PPP1R15AO75807 674 aaPredicted RBP6.5□□□□□ -1.37
RFC4-211ENST00000460408 RAC1P63000 192 aa6.5□□□□□ -1.37
RFC4-211ENST00000460408 PLEKHM2Q8IWE5 1019 aa6.5□□□□□ -1.37
RFC4-211ENST00000460408 TPCN2Q8NHX9 752 aa6.5□□□□□ -1.37
RFC4-211ENST00000460408 BHMTQ93088 406 aa6.5□□□□□ -1.37
RFC4-211ENST00000460408 EFCC1Q9HA90 598 aa6.5□□□□□ -1.37
RFC4-211ENST00000460408 SLC6A14Q9UN76 642 aa6.5□□□□□ -1.37
RFC4-211ENST00000460408 KIAA1024Q9UPX6 916 aa6.5□□□□□ -1.37
RFC4-211ENST00000460408 CHMP3Q9Y3E7 222 aa6.5□□□□□ -1.37
RFC4-211ENST00000460408 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.49□□□□□ -1.37
RFC4-211ENST00000460408 LMOD1P29536 600 aaPredicted RBP6.49□□□□□ -1.37
RFC4-211ENST00000460408 ATP1A2P50993 1020 aa6.49□□□□□ -1.37
RFC4-211ENST00000460408 CCDC102BQ68D86 513 aa6.49□□□□□ -1.37
RFC4-211ENST00000460408 PBXIP1Q96AQ6 731 aa6.49□□□□□ -1.37
RFC4-211ENST00000460408 SSBP4Q9BWG4 385 aaPredicted RBP6.49□□□□□ -1.37
RFC4-211ENST00000460408 HYAL3O43820 417 aaPredicted RBP6.48□□□□□ -1.37
RFC4-211ENST00000460408 RFX1P22670 979 aa6.48□□□□□ -1.37
RFC4-211ENST00000460408 AFF1P51825 1210 aaKnown RBP6.48□□□□□ -1.37
RFC4-211ENST00000460408 CLDN10P78369 228 aa6.48□□□□□ -1.37
RFC4-211ENST00000460408 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
RFC4-211ENST00000460408 SHISA2Q6UWI4 295 aa6.48□□□□□ -1.37
RFC4-211ENST00000460408 UBE2OQ9C0C9 1292 aaKnown RBP6.48□□□□□ -1.37
RFC4-211ENST00000460408 JPH1Q9HDC5 661 aaPredicted RBP6.48□□□□□ -1.37
RFC4-211ENST00000460408 USP17L3A6NCW0 530 aa6.47□□□□□ -1.37
RFC4-211ENST00000460408 USP17L4A6NCW7 530 aa6.47□□□□□ -1.37
RFC4-211ENST00000460408 USP17L2Q6R6M4 530 aa6.47□□□□□ -1.37
RFC4-211ENST00000460408 USP17L1Q7RTZ2 530 aa6.47□□□□□ -1.37
RFC4-211ENST00000460408 BTLAQ7Z6A9 289 aa6.47□□□□□ -1.37
RFC4-211ENST00000460408 FMR1NBQ8N0W7 255 aaPredicted RBP6.47□□□□□ -1.37
RFC4-211ENST00000460408 STAG2Q8N3U4 1231 aa6.47□□□□□ -1.37
RFC4-211ENST00000460408 TP53INP1Q96A56 240 aa6.47□□□□□ -1.37
RFC4-211ENST00000460408 C21orf2O43822 256 aa6.46□□□□□ -1.38
RFC4-211ENST00000460408 TBC1D8BQ0IIM8 1120 aa6.46□□□□□ -1.38
RFC4-211ENST00000460408 HIF1AQ16665 826 aa6.46□□□□□ -1.38
RFC4-211ENST00000460408 KANK4Q5T7N3 995 aaPredicted RBP6.46□□□□□ -1.38
RFC4-211ENST00000460408 ALDH16A1Q8IZ83 802 aa6.46□□□□□ -1.38
RFC4-211ENST00000460408 LARGE2Q8N3Y3 721 aa6.46□□□□□ -1.38
RFC4-211ENST00000460408 NUDT8Q8WV74 236 aa6.46□□□□□ -1.38
RFC4-211ENST00000460408 DNAJB12Q9NXW2 375 aaKnown RBP6.46□□□□□ -1.38
RFC4-211ENST00000460408 PPP1R12BO60237 982 aaPredicted RBP6.45□□□□□ -1.38
RFC4-211ENST00000460408 PSAPL1Q6NUJ1 521 aa6.45□□□□□ -1.38
RFC4-211ENST00000460408 SIX5Q8N196 739 aa6.45□□□□□ -1.38
RFC4-211ENST00000460408 GSX2Q9BZM3 304 aa6.45□□□□□ -1.38
RFC4-211ENST00000460408 NAGPAQ9UK23 515 aa6.45□□□□□ -1.38
RFC4-211ENST00000460408 DKK1O94907 266 aa6.44□□□□□ -1.38
RFC4-211ENST00000460408 IER5Q5VY09 327 aa6.44□□□□□ -1.38
RFC4-211ENST00000460408 DMRTC2Q8IXT2 367 aaPredicted RBP6.44□□□□□ -1.38
RFC4-211ENST00000460408 OGFOD1Q8N543 542 aa6.44□□□□□ -1.38
RFC4-211ENST00000460408 DTWD1Q8N5C7 304 aa6.44□□□□□ -1.38
RFC4-211ENST00000460408 RETREG2Q8NC44 543 aa6.44□□□□□ -1.38
RFC4-211ENST00000460408 TSEN2Q8NCE0 465 aaKnown RBP6.44□□□□□ -1.38
RFC4-211ENST00000460408 C2orf49Q9BVC5 232 aaPredicted RBP6.44□□□□□ -1.38
RFC4-211ENST00000460408 IGFLR1Q9H665 355 aa6.44□□□□□ -1.38
RFC4-211ENST00000460408 USP21Q9UK80 565 aa6.44□□□□□ -1.38
RFC4-211ENST00000460408 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.44□□□□□ -1.38
RFC4-211ENST00000460408 RGS9O75916 674 aaPredicted RBP6.43□□□□□ -1.38
RFC4-211ENST00000460408 ATG7O95352 703 aa6.43□□□□□ -1.38
RFC4-211ENST00000460408 GAS2L2Q8NHY3 880 aa6.43□□□□□ -1.38
RFC4-211ENST00000460408 ATAD2Q6PL18 1390 aa6.43□□□□□ -1.38
RFC4-211ENST00000460408 CCINQ13939 588 aa6.42□□□□□ -1.38
RFC4-211ENST00000460408 MSL1Q68DK7 614 aa6.42□□□□□ -1.38
RFC4-211ENST00000460408 FBXO11Q86XK2 927 aa6.42□□□□□ -1.38
RFC4-211ENST00000460408 PNMA5Q96PV4 448 aa6.42□□□□□ -1.38
RFC4-211ENST00000460408 VRTNQ9H8Y1 702 aa6.42□□□□□ -1.38
RFC4-211ENST00000460408 MKRN1Q9UHC7 482 aaKnown RBP6.42□□□□□ -1.38
RFC4-211ENST00000460408 RNF112Q9ULX5 631 aa6.42□□□□□ -1.38
RFC4-211ENST00000460408 NFKB1P19838 968 aa6.41□□□□□ -1.38
RFC4-211ENST00000460408 ELOAQ14241 798 aaKnown RBP6.41□□□□□ -1.38
RFC4-211ENST00000460408 GRIK5Q16478 980 aa6.41□□□□□ -1.38
RFC4-211ENST00000460408 PCSK7Q16549 785 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms