RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ORAI2Q96SN7 254 aa10.58□□□□□ -0.72
HDAC3-202ENST00000459727 COPRSQ9NQ92 184 aa10.58□□□□□ -0.72
HDAC3-202ENST00000459727 NOL7Q9UMY1 257 aaKnown RBP10.58□□□□□ -0.72
HDAC3-202ENST00000459727 LAMB4A4D0S4 1761 aa10.57□□□□□ -0.72
HDAC3-202ENST00000459727 NEURL1BA8MQ27 555 aa10.57□□□□□ -0.72
HDAC3-202ENST00000459727 F13A1P00488 732 aa10.57□□□□□ -0.72
HDAC3-202ENST00000459727 PRIM1P49642 420 aaKnown RBP10.57□□□□□ -0.72
HDAC3-202ENST00000459727 GCKRQ14397 625 aa10.57□□□□□ -0.72
HDAC3-202ENST00000459727 NECTIN1Q15223 517 aa10.57□□□□□ -0.72
HDAC3-202ENST00000459727 LRRFIP1Q32MZ4 808 aaKnown RBP10.57□□□□□ -0.72
HDAC3-202ENST00000459727 MAP4K1Q92918 833 aa10.57□□□□□ -0.72
HDAC3-202ENST00000459727 SUCLG2Q96I99 432 aa10.57□□□□□ -0.72
HDAC3-202ENST00000459727 NAP1L5Q96NT1 182 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-202ENST00000459727 BICC1Q9H694 974 aaKnown RBP10.57□□□□□ -0.72
HDAC3-202ENST00000459727 TMEM63CQ9P1W3 806 aa10.57□□□□□ -0.72
HDAC3-202ENST00000459727 KIF3AQ9Y496 699 aa10.57□□□□□ -0.72
HDAC3-202ENST00000459727 KDM6AO15550 1401 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-202ENST00000459727 MED23Q9ULK4 1368 aa10.56□□□□□ -0.72
HDAC3-202ENST00000459727 SYCE3A1L190 88 aa10.56□□□□□ -0.72
HDAC3-202ENST00000459727 ZNF500O60304 480 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-202ENST00000459727 ATP5JP18859 108 aa10.56□□□□□ -0.72
HDAC3-202ENST00000459727 RABL6Q3YEC7 729 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-202ENST00000459727 BLOC1S2Q6QNY1 142 aa10.56□□□□□ -0.72
HDAC3-202ENST00000459727 JAKMIP1Q96N16 626 aaKnown RBP10.56□□□□□ -0.72
HDAC3-202ENST00000459727 FSD1Q9BTV5 496 aa10.56□□□□□ -0.72
HDAC3-202ENST00000459727 RBSNQ9H1K0 784 aa10.56□□□□□ -0.72
HDAC3-202ENST00000459727 NLRP2Q9NX02 1062 aa10.56□□□□□ -0.72
HDAC3-202ENST00000459727 ELP1O95163 1332 aa10.56□□□□□ -0.72
HDAC3-202ENST00000459727 TPM3P06753 285 aa10.55□□□□□ -0.72
HDAC3-202ENST00000459727 HMGB1P09429 215 aaKnown RBP10.55□□□□□ -0.72
HDAC3-202ENST00000459727 SYT1P21579 422 aa10.55□□□□□ -0.72
HDAC3-202ENST00000459727 PDIA6Q15084 440 aa10.55□□□□□ -0.72
HDAC3-202ENST00000459727 CWF19L2Q2TBE0 894 aaKnown RBP10.55□□□□□ -0.72
HDAC3-202ENST00000459727 CREB3L3Q68CJ9 461 aa10.55□□□□□ -0.72
HDAC3-202ENST00000459727 ANKRD13DQ6ZTN6 518 aa10.55□□□□□ -0.72
HDAC3-202ENST00000459727 PLBD2Q8NHP8 589 aa10.55□□□□□ -0.72
HDAC3-202ENST00000459727 GPR108Q9NPR9 543 aa10.55□□□□□ -0.72
HDAC3-202ENST00000459727 RBM8AQ9Y5S9 174 aaKnown RBP10.55□□□□□ -0.72
HDAC3-202ENST00000459727 U3KPZ7 1027 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-202ENST00000459727 SRCAPQ6ZRS2 3230 aa10.54□□□□□ -0.72
HDAC3-202ENST00000459727 MAP4K4O95819 1239 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-202ENST00000459727 CSB-PGBD3P0DP91 1061 aa10.54□□□□□ -0.72
HDAC3-202ENST00000459727 KRT85P78386 507 aa10.54□□□□□ -0.72
HDAC3-202ENST00000459727 PROSER3Q2NL68 480 aa10.54□□□□□ -0.72
HDAC3-202ENST00000459727 PRPF40BQ6NWY9 871 aaKnown RBP10.54□□□□□ -0.72
HDAC3-202ENST00000459727 NOL8Q76FK4 1167 aaKnown RBP10.54□□□□□ -0.72
HDAC3-202ENST00000459727 USP48Q86UV5 1035 aa10.54□□□□□ -0.72
HDAC3-202ENST00000459727 XAGE3Q8WTP9 111 aa10.54□□□□□ -0.72
HDAC3-202ENST00000459727 FBXO3Q9UK99 471 aa10.54□□□□□ -0.72
HDAC3-202ENST00000459727 ZKSCAN5Q9Y2L8 839 aa10.54□□□□□ -0.72
HDAC3-202ENST00000459727 PCDH11XQ9BZA7 1347 aa10.54□□□□□ -0.72
HDAC3-202ENST00000459727 PCDH11YQ9BZA8 1340 aa10.54□□□□□ -0.72
HDAC3-202ENST00000459727 C5P01031 1676 aa10.53□□□□□ -0.72
HDAC3-202ENST00000459727 TMEM94Q12767 1356 aa10.53□□□□□ -0.72
HDAC3-202ENST00000459727 COL18A1P39060 1754 aa10.53□□□□□ -0.72
HDAC3-202ENST00000459727 SLC27A2O14975 620 aa10.53□□□□□ -0.72
HDAC3-202ENST00000459727 OFD1O75665 1012 aa10.53□□□□□ -0.72
HDAC3-202ENST00000459727 SASH1O94885 1247 aa10.53□□□□□ -0.72
HDAC3-202ENST00000459727 ANXA1P04083 346 aa10.53□□□□□ -0.72
HDAC3-202ENST00000459727 IGKV5-2P06315 115 aa10.53□□□□□ -0.72
HDAC3-202ENST00000459727 GJB2P29033 226 aa10.53□□□□□ -0.72
HDAC3-202ENST00000459727 CABP4P57796 275 aa10.53□□□□□ -0.72
HDAC3-202ENST00000459727 NMIQ13287 307 aaPredicted RBP10.53□□□□□ -0.72
HDAC3-202ENST00000459727 USPL1Q5W0Q7 1092 aa10.53□□□□□ -0.72
HDAC3-202ENST00000459727 RASEFQ8IZ41 740 aa10.53□□□□□ -0.72
HDAC3-202ENST00000459727 EAF2Q96CJ1 260 aaPredicted RBP10.53□□□□□ -0.72
HDAC3-202ENST00000459727 SCAND2PQ9GZW5 306 aaPredicted RBP10.53□□□□□ -0.72
HDAC3-202ENST00000459727 IL25Q9H293 177 aa10.53□□□□□ -0.72
HDAC3-202ENST00000459727 ATG3Q9NT62 314 aa10.53□□□□□ -0.72
HDAC3-202ENST00000459727 RBM27Q9P2N5 1060 aaKnown RBP10.53□□□□□ -0.72
HDAC3-202ENST00000459727 MEGF6O75095 1541 aa10.53□□□□□ -0.72
HDAC3-202ENST00000459727 CAVIN2O95810 425 aa10.52□□□□□ -0.73
HDAC3-202ENST00000459727 RPS6KB1P23443 525 aa10.52□□□□□ -0.73
HDAC3-202ENST00000459727 AIMP1Q12904 312 aaKnown RBP10.52□□□□□ -0.73
HDAC3-202ENST00000459727 TNNI3KQ59H18 835 aa10.52□□□□□ -0.73
HDAC3-202ENST00000459727 COPS6Q7L5N1 327 aa10.52□□□□□ -0.73
HDAC3-202ENST00000459727 KAZALD1Q96I82 304 aa10.52□□□□□ -0.73
HDAC3-202ENST00000459727 MYD88Q99836 296 aa10.52□□□□□ -0.73
HDAC3-202ENST00000459727 LLPHQ9BRT6 129 aaKnown RBP10.52□□□□□ -0.73
HDAC3-202ENST00000459727 PA2G4Q9UQ80 394 aaKnown RBP10.52□□□□□ -0.73
HDAC3-202ENST00000459727 AXIN2Q9Y2T1 843 aa10.52□□□□□ -0.73
HDAC3-202ENST00000459727 FPGT-TNNI3KV9GXZ4 949 aa10.52□□□□□ -0.73
HDAC3-202ENST00000459727 SH3TC1Q8TE82 1336 aa10.52□□□□□ -0.73
HDAC3-202ENST00000459727 PALLDQ8WX93 1383 aa10.52□□□□□ -0.73
HDAC3-202ENST00000459727 SPEF2Q9C093 1822 aa10.51□□□□□ -0.73
HDAC3-202ENST00000459727 ERVV-2B6SEH9 535 aa10.51□□□□□ -0.73
HDAC3-202ENST00000459727 PTMAP06454 111 aaKnown RBP10.51□□□□□ -0.73
HDAC3-202ENST00000459727 XPCQ01831 940 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-202ENST00000459727 PTH1RQ03431 593 aa10.51□□□□□ -0.73
HDAC3-202ENST00000459727 FOXD4L5Q5VV16 416 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-202ENST00000459727 ATL3Q6DD88 541 aa10.51□□□□□ -0.73
HDAC3-202ENST00000459727 CCDC83Q8IWF9 413 aa10.51□□□□□ -0.73
HDAC3-202ENST00000459727 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.51□□□□□ -0.73
HDAC3-202ENST00000459727 FOXD4L4Q8WXT5 416 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-202ENST00000459727 ZNF496Q96IT1 587 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-202ENST00000459727 HAUS7Q99871 368 aa10.51□□□□□ -0.73
HDAC3-202ENST00000459727 MTMR6Q9Y217 621 aa10.51□□□□□ -0.73
HDAC3-202ENST00000459727 SPATA31A3Q5VYP0 1347 aa10.51□□□□□ -0.73
HDAC3-202ENST00000459727 ABCC12Q96J65 1359 aa10.51□□□□□ -0.73
HDAC3-202ENST00000459727 GOLGA6L6A8MZA4 724 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms