RNA–Protein interactions for RNA: ENST00000458624.1

AC007009.1-201, humanhuman

TSL 2 BASIC

Gene AC007009.1, Length 429 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007009.1-201ENST00000458624 CCDC24Q8N4L8 307 aa28.52■■■□□ 2.16
AC007009.1-201ENST00000458624 TNRC6CQ9HCJ0 1690 aaKnown RBP28.51■■■□□ 2.16
AC007009.1-201ENST00000458624 SRGNP10124 158 aa28.51■■■□□ 2.15
AC007009.1-201ENST00000458624 TRIM28Q13263 835 aaKnown RBP28.51■■■□□ 2.15
AC007009.1-201ENST00000458624 MASTLQ96GX5 879 aa28.51■■■□□ 2.15
AC007009.1-201ENST00000458624 ISCA1Q9BUE6 129 aa28.51■■■□□ 2.15
AC007009.1-201ENST00000458624 SLC4A2P04920 1241 aa28.5■■■□□ 2.15
AC007009.1-201ENST00000458624 CNKSR1Q969H4 720 aa28.5■■■□□ 2.15
AC007009.1-201ENST00000458624 NPR1P16066 1061 aa28.49■■■□□ 2.15
AC007009.1-201ENST00000458624 NUTM1Q86Y26 1132 aa28.49■■■□□ 2.15
AC007009.1-201ENST00000458624 CACNA1SQ13698 1873 aa28.49■■■□□ 2.15
AC007009.1-201ENST00000458624 ERFEQ4G0M1 354 aa28.48■■■□□ 2.15
AC007009.1-201ENST00000458624 ZNF622Q969S3 477 aaKnown RBP eCLIP28.48■■■□□ 2.15
AC007009.1-201ENST00000458624 CRY2Q49AN0 593 aa28.47■■■□□ 2.15
AC007009.1-201ENST00000458624 KSR2Q6VAB6 950 aa28.47■■■□□ 2.15
AC007009.1-201ENST00000458624 ZNF428Q96B54 188 aa28.47■■■□□ 2.15
AC007009.1-201ENST00000458624 SH3TC1Q8TE82 1336 aa28.46■■■□□ 2.15
AC007009.1-201ENST00000458624 FLIIQ13045 1269 aa28.46■■■□□ 2.15
AC007009.1-201ENST00000458624 SLC10A5Q5PT55 438 aa28.46■■■□□ 2.15
AC007009.1-201ENST00000458624 METTL22Q9BUU2 404 aaPredicted RBP28.46■■■□□ 2.15
AC007009.1-201ENST00000458624 LAMB2P55268 1798 aa28.45■■■□□ 2.15
AC007009.1-201ENST00000458624 TRMT2AQ8IZ69 625 aaKnown RBP28.45■■■□□ 2.14
AC007009.1-201ENST00000458624 TRMT112Q9UI30 125 aaKnown RBP28.45■■■□□ 2.14
AC007009.1-201ENST00000458624 SLX4Q8IY92 1834 aa28.44■■■□□ 2.14
AC007009.1-201ENST00000458624 TCERG1O14776 1098 aaKnown RBP28.44■■■□□ 2.14
AC007009.1-201ENST00000458624 CCDC191Q8NCU4 936 aa28.44■■■□□ 2.14
AC007009.1-201ENST00000458624 ADCY9O60503 1353 aa28.44■■■□□ 2.14
AC007009.1-201ENST00000458624 PI4KAP2A4QPH2 592 aa28.43■■■□□ 2.14
AC007009.1-201ENST00000458624 PI4KAP1Q8N8J0 262 aa28.43■■■□□ 2.14
AC007009.1-201ENST00000458624 MAP3K2Q9Y2U5 619 aa28.43■■■□□ 2.14
AC007009.1-201ENST00000458624 CT47B1P0C2W7 299 aaPredicted RBP28.42■■■□□ 2.14
AC007009.1-201ENST00000458624 NEXNQ0ZGT2 675 aa28.42■■■□□ 2.14
AC007009.1-201ENST00000458624 SOGA3Q5TF21 947 aa28.42■■■□□ 2.14
AC007009.1-201ENST00000458624 G2E3Q7L622 706 aa28.42■■■□□ 2.14
AC007009.1-201ENST00000458624 NLRP3Q96P20 1036 aa28.42■■■□□ 2.14
AC007009.1-201ENST00000458624 DDX60Q8IY21 1712 aaKnown RBP28.41■■■□□ 2.14
AC007009.1-201ENST00000458624 ATP5J2-PTCD1G3V325 749 aa28.41■■■□□ 2.14
AC007009.1-201ENST00000458624 ALDH1B1P30837 517 aa28.41■■■□□ 2.14
AC007009.1-201ENST00000458624 ARHGAP27Q6ZUM4 889 aa28.41■■■□□ 2.14
AC007009.1-201ENST00000458624 CDCA7LQ96GN5 454 aa28.41■■■□□ 2.14
AC007009.1-201ENST00000458624 MYD88Q99836 296 aa28.41■■■□□ 2.14
AC007009.1-201ENST00000458624 CEP350Q5VT06 3117 aa28.41■■■□□ 2.14
AC007009.1-201ENST00000458624 FER1L6Q2WGJ9 1857 aa28.4■■■□□ 2.14
AC007009.1-201ENST00000458624 HSP90B1P14625 803 aaKnown RBP28.4■■■□□ 2.14
AC007009.1-201ENST00000458624 HOXA10P31260 410 aaPredicted RBP28.4■■■□□ 2.14
AC007009.1-201ENST00000458624 FKBP5Q13451 457 aaPredicted RBP28.4■■■□□ 2.14
AC007009.1-201ENST00000458624 PRPF40BQ6NWY9 871 aaKnown RBP28.4■■■□□ 2.14
AC007009.1-201ENST00000458624 RPGRQ92834 1020 aaKnown RBP28.4■■■□□ 2.14
AC007009.1-201ENST00000458624 SBF1O95248 1867 aa28.39■■■□□ 2.14
AC007009.1-201ENST00000458624 HNRNPUQ00839 825 aaKnown RBP eCLIP28.39■■■□□ 2.14
AC007009.1-201ENST00000458624 CWC25Q9NXE8 425 aaPredicted RBP28.39■■■□□ 2.14
AC007009.1-201ENST00000458624 ZBTB38Q8NAP3 1195 aaPredicted RBP28.37■■■□□ 2.13
AC007009.1-201ENST00000458624 DNAAF4Q8WXU2 420 aa28.36■■■□□ 2.13
AC007009.1-201ENST00000458624 CRAMP1Q96RY5 1269 aa28.36■■■□□ 2.13
AC007009.1-201ENST00000458624 PCCAP05165 728 aaPredicted RBP28.35■■■□□ 2.13
AC007009.1-201ENST00000458624 RBM17Q96I25 401 aaKnown RBP28.35■■■□□ 2.13
AC007009.1-201ENST00000458624 ALDH1L2Q3SY69 923 aa28.34■■■□□ 2.13
AC007009.1-201ENST00000458624 FAM89AQ96GI7 184 aa28.34■■■□□ 2.13
AC007009.1-201ENST00000458624 C21orf2O43822 256 aa28.33■■■□□ 2.13
AC007009.1-201ENST00000458624 IGKV5-2P06315 115 aa28.33■■■□□ 2.13
AC007009.1-201ENST00000458624 HCLS1P14317 486 aaPredicted RBP28.33■■■□□ 2.13
AC007009.1-201ENST00000458624 IFFO2Q5TF58 517 aa28.33■■■□□ 2.13
AC007009.1-201ENST00000458624 C7orf43Q8WVR3 580 aa28.33■■■□□ 2.13
AC007009.1-201ENST00000458624 LTBP3Q9NS15 1303 aa28.33■■■□□ 2.13
AC007009.1-201ENST00000458624 MYH3P11055 1940 aa28.32■■■□□ 2.12
AC007009.1-201ENST00000458624 LINS1Q8NG48 757 aa28.32■■■□□ 2.12
AC007009.1-201ENST00000458624 ZBED9Q6R2W3 1325 aa28.32■■■□□ 2.12
AC007009.1-201ENST00000458624 NEURL1BA8MQ27 555 aa28.31■■■□□ 2.12
AC007009.1-201ENST00000458624 IRS4O14654 1257 aaPredicted RBP28.31■■■□□ 2.12
AC007009.1-201ENST00000458624 CCDC93Q567U6 631 aa28.31■■■□□ 2.12
AC007009.1-201ENST00000458624 CC2D2BQ6DHV5 1058 aa28.31■■■□□ 2.12
AC007009.1-201ENST00000458624 C3orf67Q6ZVT6 689 aa28.31■■■□□ 2.12
AC007009.1-201ENST00000458624 SYNE4Q8N205 404 aa28.31■■■□□ 2.12
AC007009.1-201ENST00000458624 CDHR2Q9BYE9 1310 aa28.31■■■□□ 2.12
AC007009.1-201ENST00000458624 CCDC88AQ3V6T2 1871 aa28.31■■■□□ 2.12
AC007009.1-201ENST00000458624 DICER1Q9UPY3 1922 aaKnown RBP28.3■■■□□ 2.12
AC007009.1-201ENST00000458624 GRIPAP1Q4V328 841 aa28.3■■■□□ 2.12
AC007009.1-201ENST00000458624 PTPRCP08575 1304 aa28.29■■■□□ 2.12
AC007009.1-201ENST00000458624 ZC3H4Q9UPT8 1303 aaKnown RBP28.29■■■□□ 2.12
AC007009.1-201ENST00000458624 SF3B3Q15393 1217 aaKnown RBP28.29■■■□□ 2.12
AC007009.1-201ENST00000458624 MRPL50Q8N5N7 158 aaKnown RBP28.29■■■□□ 2.12
AC007009.1-201ENST00000458624 NFKBIEO00221 500 aa28.28■■■□□ 2.12
AC007009.1-201ENST00000458624 LMNB1P20700 586 aa28.28■■■□□ 2.12
AC007009.1-201ENST00000458624 DDX46Q7L014 1031 aaKnown RBP28.28■■■□□ 2.12
AC007009.1-201ENST00000458624 SSH1Q8WYL5 1049 aa28.28■■■□□ 2.12
AC007009.1-201ENST00000458624 ABCC4O15439 1325 aa28.27■■■□□ 2.12
AC007009.1-201ENST00000458624 CWF19L2Q2TBE0 894 aaKnown RBP28.27■■■□□ 2.12
AC007009.1-201ENST00000458624 RTKN2Q8IZC4 609 aa28.27■■■□□ 2.12
AC007009.1-201ENST00000458624 TAOK3Q9H2K8 898 aa28.27■■■□□ 2.12
AC007009.1-201ENST00000458624 PDE8AO60658 829 aa28.26■■■□□ 2.11
AC007009.1-201ENST00000458624 RASSF7Q02833 373 aa28.26■■■□□ 2.11
AC007009.1-201ENST00000458624 C9orf131Q5VYM1 1079 aa28.26■■■□□ 2.11
AC007009.1-201ENST00000458624 ZNF219Q9P2Y4 722 aaPredicted RBP28.26■■■□□ 2.11
AC007009.1-201ENST00000458624 PPEF1O14829 653 aaPredicted RBP28.25■■■□□ 2.11
AC007009.1-201ENST00000458624 BBOX1O75936 387 aa28.25■■■□□ 2.11
AC007009.1-201ENST00000458624 GCKRQ14397 625 aa28.25■■■□□ 2.11
AC007009.1-201ENST00000458624 RTL5Q5HYW3 569 aaPredicted RBP28.25■■■□□ 2.11
AC007009.1-201ENST00000458624 TMC4Q7Z404 712 aa28.25■■■□□ 2.11
AC007009.1-201ENST00000458624 SMC4Q9NTJ3 1288 aa28.25■■■□□ 2.11
AC007009.1-201ENST00000458624 SNED1Q8TER0 1413 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms