RNA–Protein interactions for RNA: ENST00000458578.6

UBE2L3-202, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-202ENST00000458578 LARP1Q6PKG0 1096 aaKnown RBP13.73□□□□□ -0.21
UBE2L3-202ENST00000458578 CLASRPQ8N2M8 674 aaKnown RBP13.73□□□□□ -0.21
UBE2L3-202ENST00000458578 TRMT1Q9NXH9 659 aaKnown RBP13.73□□□□□ -0.21
UBE2L3-202ENST00000458578 TAF6LQ9Y6J9 622 aa13.73□□□□□ -0.21
UBE2L3-202ENST00000458578 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.73□□□□□ -0.21
UBE2L3-202ENST00000458578 NR1I2O75469 434 aa13.72□□□□□ -0.21
UBE2L3-202ENST00000458578 CACTINQ8WUQ7 758 aaKnown RBP13.72□□□□□ -0.21
UBE2L3-202ENST00000458578 AOX1Q06278 1338 aa13.72□□□□□ -0.21
UBE2L3-202ENST00000458578 GLRX3O76003 335 aaKnown RBP13.72□□□□□ -0.21
UBE2L3-202ENST00000458578 CCDC144BQ3MJ40 725 aa13.72□□□□□ -0.21
UBE2L3-202ENST00000458578 CCDC144CPQ8IYA2 1237 aa13.72□□□□□ -0.21
UBE2L3-202ENST00000458578 CHPF2Q9P2E5 772 aa13.72□□□□□ -0.21
UBE2L3-202ENST00000458578 TECPR2O15040 1411 aa13.72□□□□□ -0.21
UBE2L3-202ENST00000458578 PTPRUQ92729 1446 aa13.72□□□□□ -0.21
UBE2L3-202ENST00000458578 CTIFO43310 598 aaKnown RBP13.72□□□□□ -0.21
UBE2L3-202ENST00000458578 FILIP1Q7Z7B0 1213 aa13.72□□□□□ -0.21
UBE2L3-202ENST00000458578 AACSQ86V21 672 aa13.72□□□□□ -0.21
UBE2L3-202ENST00000458578 ZSCAN31Q96LW9 406 aaPredicted RBP13.72□□□□□ -0.21
UBE2L3-202ENST00000458578 SH2B1Q9NRF2 756 aaPredicted RBP13.72□□□□□ -0.21
UBE2L3-202ENST00000458578 AKAP12Q02952 1782 aa13.72□□□□□ -0.21
UBE2L3-202ENST00000458578 USP31Q70CQ4 1352 aa13.71□□□□□ -0.21
UBE2L3-202ENST00000458578 ZNF75DP51815 510 aa13.71□□□□□ -0.21
UBE2L3-202ENST00000458578 CREB3L3Q68CJ9 461 aa13.71□□□□□ -0.21
UBE2L3-202ENST00000458578 CCDC8Q9H0W5 538 aaPredicted RBP13.71□□□□□ -0.21
UBE2L3-202ENST00000458578 ZSWIM6Q9HCJ5 1215 aa13.71□□□□□ -0.21
UBE2L3-202ENST00000458578 USP27XA6NNY8 438 aa13.71□□□□□ -0.22
UBE2L3-202ENST00000458578 IL17RAQ96F46 866 aa13.71□□□□□ -0.22
UBE2L3-202ENST00000458578 SIL1Q9H173 461 aa13.71□□□□□ -0.22
UBE2L3-202ENST00000458578 KIF20AO95235 890 aa13.7□□□□□ -0.22
UBE2L3-202ENST00000458578 ERCC4Q92889 916 aaPredicted RBP13.7□□□□□ -0.22
UBE2L3-202ENST00000458578 SYTL4Q96C24 671 aaPredicted RBP13.7□□□□□ -0.22
UBE2L3-202ENST00000458578 POLA2Q14181 598 aa13.7□□□□□ -0.22
UBE2L3-202ENST00000458578 LMOD2Q6P5Q4 547 aa13.7□□□□□ -0.22
UBE2L3-202ENST00000458578 BOLA2Q9H3K6 86 aa13.7□□□□□ -0.22
UBE2L3-202ENST00000458578 C9orf78Q9NZ63 289 aaPredicted RBP13.7□□□□□ -0.22
UBE2L3-202ENST00000458578 AGLP35573 1532 aa13.7□□□□□ -0.22
UBE2L3-202ENST00000458578 TTC21AQ8NDW8 1320 aa13.7□□□□□ -0.22
UBE2L3-202ENST00000458578 SMTNL1A8MU46 457 aa13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 JAK2O60674 1132 aa13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 NMIQ13287 307 aaPredicted RBP13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 MPRIPQ6WCQ1 1025 aa13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 ECHDC1Q9NTX5 307 aa13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 CCDC171Q6TFL3 1326 aa13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 GOLGA6L19H0YKK7 550 aa13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 BLOC1S2Q6QNY1 142 aa13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 LEO1Q8WVC0 666 aaPredicted RBP13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 DIP2BQ9P265 1576 aa13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 CEP135Q66GS9 1140 aa13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 DNAAF4Q8WXU2 420 aa13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 LRRC59Q96AG4 307 aaKnown RBP13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 OGFRQ9NZT2 677 aa13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 CTNNA3Q9UI47 895 aa13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 CCDC9Q9Y3X0 531 aaKnown RBP13.69□□□□□ -0.22
UBE2L3-202ENST00000458578 NRKQ7Z2Y5 1582 aa13.68□□□□□ -0.22
UBE2L3-202ENST00000458578 HSP90B1P14625 803 aaKnown RBP13.68□□□□□ -0.22
UBE2L3-202ENST00000458578 KCNA6P17658 529 aa13.68□□□□□ -0.22
UBE2L3-202ENST00000458578 NECTIN1Q15223 517 aa13.68□□□□□ -0.22
UBE2L3-202ENST00000458578 FSD1Q9BTV5 496 aa13.68□□□□□ -0.22
UBE2L3-202ENST00000458578 LRRC2Q9BYS8 371 aa13.68□□□□□ -0.22
UBE2L3-202ENST00000458578 USP16Q9Y5T5 823 aa13.68□□□□□ -0.22
UBE2L3-202ENST00000458578 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.68□□□□□ -0.22
UBE2L3-202ENST00000458578 KDRP35968 1356 aa13.68□□□□□ -0.22
UBE2L3-202ENST00000458578 MAP3K5Q99683 1374 aa13.68□□□□□ -0.22
UBE2L3-202ENST00000458578 ZBTB22O15209 634 aa13.68□□□□□ -0.22
UBE2L3-202ENST00000458578 EDC3Q96F86 508 aaKnown RBP13.68□□□□□ -0.22
UBE2L3-202ENST00000458578 NAP1L2Q9ULW6 460 aaPredicted RBP13.68□□□□□ -0.22
UBE2L3-202ENST00000458578 ERICH4A6NGS2 130 aa13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 H3BQV1 296 aa13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 SLC27A2O14975 620 aa13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 CWF19L2Q2TBE0 894 aaKnown RBP13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 IFFO2Q5TF58 517 aa13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 PGBD1Q96JS3 809 aa13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 FTOQ9C0B1 505 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 SCAND2PQ9GZW5 306 aaPredicted RBP13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 ZNF215Q9UL58 517 aaPredicted RBP13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 A0A0D9SFI3 127 aa13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 EPB41L2O43491 1005 aaKnown RBP13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 NBPF6Q5VWK0 638 aa13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 GPATCH3Q96I76 525 aa13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 NBPF4Q96M43 638 aa13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 FEZ1Q99689 392 aa13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 TAOK2Q9UL54 1235 aa13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 NDUFB9Q9Y6M9 179 aa13.67□□□□□ -0.22
UBE2L3-202ENST00000458578 PDCP20941 246 aa13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 TEFQ10587 303 aa13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 AIMP1Q12904 312 aaKnown RBP13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 KLHDC4Q8TBB5 520 aa13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 CLSTN2Q9H4D0 955 aa13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 TLR7Q9NYK1 1049 aaKnown RBP13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 BECN2A8MW95 431 aa13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 FGD1P98174 961 aa13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 HSP90AB4PQ58FF6 505 aa13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 C11orf57Q6ZUT1 292 aaPredicted RBP13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 PLA2G4DQ86XP0 818 aa13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 NPHP3Q7Z494 1330 aa13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 TUBGCP6Q96RT7 1819 aa13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 PRAMEF22A3QJZ6 481 aa13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 SKILP12757 684 aa13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 BEND3Q5T5X7 828 aa13.66□□□□□ -0.22
UBE2L3-202ENST00000458578 DDX19AQ9NUU7 478 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms