RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 SPATA32Q96LK8 384 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 ALDH8A1Q9H2A2 487 aaPredicted RBP3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 TNMDQ9H2S6 317 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 GDPD2Q9HCC8 539 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 ZSWIM6Q9HCJ5 1215 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 NSFL1CQ9UNZ2 370 aaKnown RBP3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 SPG7Q9UQ90 795 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 MTMR6Q9Y217 621 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 MAP3K2Q9Y2U5 619 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 RBM8AQ9Y5S9 174 aaKnown RBP3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 PHRF1Q9P1Y6 1649 aaKnown RBP3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 NFAT5O94916 1531 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 NPHP3Q7Z494 1330 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 ADCY9O60503 1353 aa3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 GOLGA6L19H0YKK7 550 aa3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 GRM8O00222 908 aa3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 SLC27A2O14975 620 aa3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 CTAGE5O15320 804 aa3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 RNMTO43148 476 aaKnown RBP3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 HMGB1P09429 215 aaKnown RBP3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 NBPF7P0C2Y1 421 aaPredicted RBP3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 RPS6KB1P23443 525 aa3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 TPM4P67936 248 aa3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 DNM1Q05193 864 aaKnown RBP3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 NMIQ13287 307 aaPredicted RBP3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 ZRSR1Q15695 479 aaKnown RBP3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 LRRFIP1Q32MZ4 808 aaKnown RBP3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 TPRNQ4KMQ1 711 aa3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 CCDC73Q6ZRK6 1079 aa3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 RIC3Q7Z5B4 369 aa3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 TICAM2Q86XR7 235 aa3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 SMAP1Q8IYB5 467 aaPredicted RBP3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 RASEFQ8IZ41 740 aa3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 CCDC94Q9BW85 323 aaPredicted RBP3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 ZSCAN16Q9H4T2 348 aaPredicted RBP3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 DDX21Q9NR30 783 aaKnown RBP eCLIP3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 SPTLC3Q9NUV7 552 aa3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 CFAP45Q9UL16 551 aa3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 U3KPZ7 1027 aaPredicted RBP3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 MARF1Q9Y4F3 1742 aaKnown RBP3.94□□□□□ -1.78
HMGN1P18-201ENST00000457642 PLEKHG2Q9H7P9 1386 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 KIF2AO00139 706 aaPredicted RBP3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 GIGYF1O75420 1035 aaPredicted RBP3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 KCNA6P17658 529 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 CDC25BP30305 580 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 GTF2F1P35269 517 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 PTH1RQ03431 593 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 TYRO3Q06418 890 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 NECTIN1Q15223 517 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 SYCP1Q15431 976 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 STX1AQ16623 288 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 ATL3Q6DD88 541 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 GIMAP6Q6P9H5 292 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 MPRIPQ6WCQ1 1025 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 ANKLE2Q86XL3 938 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 TTC5Q8N0Z6 440 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 PDCL2Q8N4E4 241 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 RAPGEF4Q8WZA2 1011 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 MAP4K1Q92918 833 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 CHAMP1Q96JM3 812 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 ZNF396Q96N95 335 aaPredicted RBP3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 TRIM5Q9C035 493 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 NAT10Q9H0A0 1025 aaKnown RBP3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 CLSTN2Q9H4D0 955 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 SNRKQ9NRH2 765 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 SLIT3O75094 1523 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 KIF1AQ12756 1690 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 TCHHQ07283 1943 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 UTYO14607 1347 aa3.93□□□□□ -1.78
HMGN1P18-201ENST00000457642 MRC1P22897 1456 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 JCADQ9P266 1359 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 MED23Q9ULK4 1368 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 ABCC6O95255 1503 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 CAMTA1Q9Y6Y1 1673 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 SMTNL1A8MU46 457 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 BECN2A8MW95 431 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 CCP110O43303 1012 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 KINO60870 393 aaKnown RBP3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 LARGE1O95461 756 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 CPA1P15085 419 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 TATP17735 454 aaPredicted RBP3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 ATP5JP18859 108 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 AIMP1Q12904 312 aaKnown RBP3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 ME3Q16798 604 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 TSGA10IPQ3SY00 556 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 ANO6Q4KMQ2 910 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 ESCO1Q5FWF5 840 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 NBPF6Q5VWK0 638 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 NAA16Q6N069 864 aaPredicted RBP3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 CDC37L1Q7L3B6 337 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 FERMT3Q86UX7 667 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 CEP57L1Q8IYX8 460 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 NECAB1Q8N987 351 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 SPC24Q8NBT2 197 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 TDRD7Q8NHU6 1098 aaKnown RBP3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 ANKRD24Q8TF21 1146 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 GTF3C6Q969F1 213 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 SUCLG2Q96I99 432 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 NBPF4Q96M43 638 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms