RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 NBPF26B4DH59 902 aa15□□□□□ -0.01
LINC00959-201ENST00000456581 A1BGP04217 495 aa15□□□□□ -0.01
LINC00959-201ENST00000456581 NBPF14Q5TI25 921 aa15□□□□□ -0.01
LINC00959-201ENST00000456581 NBPF10Q6P3W6 841 aaKnown RBP15□□□□□ -0.01
LINC00959-201ENST00000456581 ANKRD13DQ6ZTN6 518 aa15□□□□□ -0.01
LINC00959-201ENST00000456581 NBPF15Q8N660 670 aa15□□□□□ -0.01
LINC00959-201ENST00000456581 BTG4Q9NY30 223 aa15□□□□□ -0.01
LINC00959-201ENST00000456581 PKD1L3Q7Z443 1732 aa14.99□□□□□ -0.01
LINC00959-201ENST00000456581 LRSAM1Q6UWE0 723 aa14.99□□□□□ -0.01
LINC00959-201ENST00000456581 KIF1BPQ96EK5 621 aa14.99□□□□□ -0.01
LINC00959-201ENST00000456581 PDLIM2Q96JY6 352 aa14.99□□□□□ -0.01
LINC00959-201ENST00000456581 CARD10Q9BWT7 1032 aa14.99□□□□□ -0.01
LINC00959-201ENST00000456581 STAP2Q9UGK3 403 aa14.99□□□□□ -0.01
LINC00959-201ENST00000456581 PCDH11XQ9BZA7 1347 aa14.99□□□□□ -0.01
LINC00959-201ENST00000456581 PCDH11YQ9BZA8 1340 aa14.99□□□□□ -0.01
LINC00959-201ENST00000456581 PI4K2BQ8TCG2 481 aa14.99□□□□□ -0.01
LINC00959-201ENST00000456581 BRD1O95696 1058 aa14.98□□□□□ -0.01
LINC00959-201ENST00000456581 GCKRQ14397 625 aa14.98□□□□□ -0.01
LINC00959-201ENST00000456581 RAB11FIP3O75154 756 aa14.98□□□□□ -0.01
LINC00959-201ENST00000456581 TTLL7Q6ZT98 887 aa14.98□□□□□ -0.01
LINC00959-201ENST00000456581 AHDC1Q5TGY3 1603 aaPredicted RBP14.98□□□□□ -0.01
LINC00959-201ENST00000456581 METTL22Q9BUU2 404 aaPredicted RBP14.98□□□□□ -0.01
LINC00959-201ENST00000456581 NEXNQ0ZGT2 675 aa14.97□□□□□ -0.01
LINC00959-201ENST00000456581 MTX1Q13505 466 aa14.97□□□□□ -0.01
LINC00959-201ENST00000456581 UBE3BQ7Z3V4 1068 aa14.97□□□□□ -0.01
LINC00959-201ENST00000456581 NOL7Q9UMY1 257 aaKnown RBP14.97□□□□□ -0.01
LINC00959-201ENST00000456581 ZNF330Q9Y3S2 320 aaPredicted RBP14.97□□□□□ -0.01
LINC00959-201ENST00000456581 MRC1P22897 1456 aa14.97□□□□□ -0.01
LINC00959-201ENST00000456581 TUBGCP6Q96RT7 1819 aa14.96□□□□□ -0.01
LINC00959-201ENST00000456581 SASH1O94885 1247 aa14.96□□□□□ -0.01
LINC00959-201ENST00000456581 COL9A3Q14050 684 aaPredicted RBP14.96□□□□□ -0.01
LINC00959-201ENST00000456581 ABCA3Q99758 1704 aa14.96□□□□□ -0.01
LINC00959-201ENST00000456581 USP48Q86UV5 1035 aa14.96□□□□□ -0.02
LINC00959-201ENST00000456581 UQCRHLA0A096LP55 91 aa14.95□□□□□ -0.02
LINC00959-201ENST00000456581 UQCRHP07919 91 aa14.95□□□□□ -0.02
LINC00959-201ENST00000456581 RASEFQ8IZ41 740 aa14.95□□□□□ -0.02
LINC00959-201ENST00000456581 CCDC8Q9H0W5 538 aaPredicted RBP14.95□□□□□ -0.02
LINC00959-201ENST00000456581 TLR7Q9NYK1 1049 aaKnown RBP14.95□□□□□ -0.02
LINC00959-201ENST00000456581 ABCC6O95255 1503 aa14.95□□□□□ -0.02
LINC00959-201ENST00000456581 ZBTB3Q9H5J0 574 aa14.95□□□□□ -0.02
LINC00959-201ENST00000456581 ASAP1Q9ULH1 1129 aa14.95□□□□□ -0.02
LINC00959-201ENST00000456581 TPM2P07951 284 aa14.94□□□□□ -0.02
LINC00959-201ENST00000456581 CUL4AQ13619 759 aa14.94□□□□□ -0.02
LINC00959-201ENST00000456581 AACSQ86V21 672 aa14.94□□□□□ -0.02
LINC00959-201ENST00000456581 CNPY2Q9Y2B0 182 aa14.94□□□□□ -0.02
LINC00959-201ENST00000456581 GLI3P10071 1580 aa14.94□□□□□ -0.02
LINC00959-201ENST00000456581 UTYO14607 1347 aa14.94□□□□□ -0.02
LINC00959-201ENST00000456581 EAF2Q96CJ1 260 aaPredicted RBP14.94□□□□□ -0.02
LINC00959-201ENST00000456581 A0A087WZG4 1122 aa14.93□□□□□ -0.02
LINC00959-201ENST00000456581 CWC27Q6UX04 472 aaKnown RBP14.93□□□□□ -0.02
LINC00959-201ENST00000456581 CLASRPQ8N2M8 674 aaKnown RBP14.93□□□□□ -0.02
LINC00959-201ENST00000456581 ZKSCAN5Q9Y2L8 839 aa14.93□□□□□ -0.02
LINC00959-201ENST00000456581 ERVV-2B6SEH9 535 aa14.93□□□□□ -0.02
LINC00959-201ENST00000456581 TOM1O60784 492 aa14.93□□□□□ -0.02
LINC00959-201ENST00000456581 LARGE1O95461 756 aa14.93□□□□□ -0.02
LINC00959-201ENST00000456581 MCCP23508 829 aa14.93□□□□□ -0.02
LINC00959-201ENST00000456581 NHSL1Q5SYE7 1610 aa14.93□□□□□ -0.02
LINC00959-201ENST00000456581 PRDM10Q9NQV6 1147 aa14.93□□□□□ -0.02
LINC00959-201ENST00000456581 NKX1-1Q15270 411 aaPredicted RBP14.92□□□□□ -0.02
LINC00959-201ENST00000456581 GLIPR1L2Q4G1C9 344 aa14.92□□□□□ -0.02
LINC00959-201ENST00000456581 TTC12Q9H892 705 aaPredicted RBP14.92□□□□□ -0.02
LINC00959-201ENST00000456581 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.92□□□□□ -0.02
LINC00959-201ENST00000456581 PARP4Q9UKK3 1724 aaKnown RBP14.92□□□□□ -0.02
LINC00959-201ENST00000456581 ADAMTS2O95450 1211 aa14.92□□□□□ -0.02
LINC00959-201ENST00000456581 IFIT2P09913 472 aaKnown RBP14.92□□□□□ -0.02
LINC00959-201ENST00000456581 G3BP1Q13283 466 aaKnown RBP eCLIP14.92□□□□□ -0.02
LINC00959-201ENST00000456581 HSP90AB4PQ58FF6 505 aa14.92□□□□□ -0.02
LINC00959-201ENST00000456581 PIGBQ92521 554 aa14.92□□□□□ -0.02
LINC00959-201ENST00000456581 SHANK3Q9BYB0 1731 aa14.91□□□□□ -0.02
LINC00959-201ENST00000456581 PTMAP06454 111 aaKnown RBP14.91□□□□□ -0.02
LINC00959-201ENST00000456581 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.91□□□□□ -0.02
LINC00959-201ENST00000456581 USP25Q9UHP3 1055 aa14.91□□□□□ -0.02
LINC00959-201ENST00000456581 CCDC9Q9Y3X0 531 aaKnown RBP14.91□□□□□ -0.02
LINC00959-201ENST00000456581 RPAP1Q9BWH6 1393 aaPredicted RBP14.91□□□□□ -0.02
LINC00959-201ENST00000456581 PDCL3Q9H2J4 239 aa14.91□□□□□ -0.02
LINC00959-201ENST00000456581 TSPY26PQ9H489 355 aa14.91□□□□□ -0.02
LINC00959-201ENST00000456581 TMOD3Q9NYL9 352 aa14.91□□□□□ -0.02
LINC00959-201ENST00000456581 NDUFB9Q9Y6M9 179 aa14.91□□□□□ -0.02
LINC00959-201ENST00000456581 FIBPO43427 364 aa14.9□□□□□ -0.02
LINC00959-201ENST00000456581 AK2P54819 239 aa14.9□□□□□ -0.02
LINC00959-201ENST00000456581 PLBD2Q8NHP8 589 aa14.9□□□□□ -0.02
LINC00959-201ENST00000456581 SYTL4Q96C24 671 aaPredicted RBP14.9□□□□□ -0.02
LINC00959-201ENST00000456581 ZNF500O60304 480 aaPredicted RBP14.9□□□□□ -0.02
LINC00959-201ENST00000456581 CHMP3Q9Y3E7 222 aa14.9□□□□□ -0.02
LINC00959-201ENST00000456581 SNX14Q9Y5W7 946 aa14.9□□□□□ -0.02
LINC00959-201ENST00000456581 HSPA4P34932 840 aa14.89□□□□□ -0.03
LINC00959-201ENST00000456581 PLCB2Q00722 1185 aa14.89□□□□□ -0.03
LINC00959-201ENST00000456581 RUFY3Q7L099 469 aa14.89□□□□□ -0.03
LINC00959-201ENST00000456581 DNAJC10Q8IXB1 793 aa14.89□□□□□ -0.03
LINC00959-201ENST00000456581 EDC3Q96F86 508 aaKnown RBP14.89□□□□□ -0.03
LINC00959-201ENST00000456581 KCPQ6ZWJ8 1503 aa14.89□□□□□ -0.03
LINC00959-201ENST00000456581 AOX1Q06278 1338 aa14.89□□□□□ -0.03
LINC00959-201ENST00000456581 A0A0G2JS52 829 aa14.89□□□□□ -0.03
LINC00959-201ENST00000456581 MBD3O95983 291 aa14.89□□□□□ -0.03
LINC00959-201ENST00000456581 HCLS1P14317 486 aaPredicted RBP14.89□□□□□ -0.03
LINC00959-201ENST00000456581 ECHDC1Q9NTX5 307 aa14.89□□□□□ -0.03
LINC00959-201ENST00000456581 AFDNP55196 1824 aaKnown RBP14.89□□□□□ -0.03
LINC00959-201ENST00000456581 AP5Z1O43299 807 aa14.88□□□□□ -0.03
LINC00959-201ENST00000456581 PTPN12Q05209 780 aaKnown RBP14.88□□□□□ -0.03
LINC00959-201ENST00000456581 ADCK5Q3MIX3 580 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms