RNA–Protein interactions for RNA: ENST00000456459.1

PCDH9-AS4-201, PCDH9 antisense RNA 4, humanhuman

TSL 3 BASIC

Gene PCDH9-AS4, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS4-201ENST00000456459 ALAS2P22557 587 aa9.68□□□□□ -0.86
PCDH9-AS4-201ENST00000456459 TNFRSF25Q93038 417 aa9.68□□□□□ -0.86
PCDH9-AS4-201ENST00000456459 BCS1LQ9Y276 419 aa9.68□□□□□ -0.86
PCDH9-AS4-201ENST00000456459 WEE1P30291 646 aa9.67□□□□□ -0.86
PCDH9-AS4-201ENST00000456459 HIF1AQ16665 826 aa9.67□□□□□ -0.86
PCDH9-AS4-201ENST00000456459 FAM200AQ8TCP9 573 aa9.67□□□□□ -0.86
PCDH9-AS4-201ENST00000456459 TRIM11Q96F44 468 aa9.67□□□□□ -0.86
PCDH9-AS4-201ENST00000456459 NEUROD1Q13562 356 aa9.66□□□□□ -0.86
PCDH9-AS4-201ENST00000456459 NOP53Q9NZM5 478 aaKnown RBP9.66□□□□□ -0.86
PCDH9-AS4-201ENST00000456459 IER5Q5VY09 327 aa9.65□□□□□ -0.86
PCDH9-AS4-201ENST00000456459 BHMTQ93088 406 aa9.65□□□□□ -0.86
PCDH9-AS4-201ENST00000456459 KLK14Q9P0G3 267 aa9.65□□□□□ -0.86
PCDH9-AS4-201ENST00000456459 DMGDHQ9UI17 866 aaKnown RBP9.65□□□□□ -0.86
PCDH9-AS4-201ENST00000456459 NOVA2Q9UNW9 492 aaKnown RBP9.65□□□□□ -0.86
PCDH9-AS4-201ENST00000456459 STARD13Q9Y3M8 1113 aa9.65□□□□□ -0.86
PCDH9-AS4-201ENST00000456459 TGFBR3LH3BV60 316 aa9.64□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 ADH7P40394 386 aa9.64□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 PLVAPQ9BX97 442 aa9.64□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 QTRT2Q9H974 415 aaKnown RBP9.64□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 FOXO3O43524 673 aa9.63□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 M0R082 166 aa9.62□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 ZNF417Q8TAU3 575 aa9.62□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 ZNF587Q96SQ5 575 aaPredicted RBP9.62□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 C1QTNF9BB2RNN3 333 aa9.61□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 ALBP02768 609 aa9.61□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 GRNP28799 593 aaKnown RBP9.61□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 DGKZQ13574 1117 aa9.61□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 COL9A3Q14050 684 aaPredicted RBP9.61□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 C8orf86Q6ZUL3 223 aa9.61□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 GSX2Q9BZM3 304 aa9.61□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 ZMYND15Q9H091 742 aa9.61□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 ZMIZ1Q9ULJ6 1067 aa9.61□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 CHRNA4P43681 627 aa9.6□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 SRPK2P78362 688 aaKnown RBP9.6□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 CD163Q86VB7 1156 aa9.6□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 MICALL1Q8N3F8 863 aa9.6□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 VTI1AQ96AJ9 217 aa9.6□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.59□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 INPP5BP32019 993 aa9.59□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 IDH3AP50213 366 aa9.59□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 MYO19Q96H55 970 aa9.59□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 PRIMPOLQ96LW4 560 aa9.59□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 PRDM6Q9NQX0 595 aa9.59□□□□□ -0.87
PCDH9-AS4-201ENST00000456459 LOC100996750A0A140TA64 210 aa9.58□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 BAG6P46379 1132 aa9.58□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 TBC1D8BQ0IIM8 1120 aa9.58□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 FKBP5Q13451 457 aaPredicted RBP9.58□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 ELOAQ14241 798 aaKnown RBP9.58□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 C20orf204Q6ZNR8 217 aa9.58□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 STK32AQ8WU08 396 aa9.58□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 KRTAP4-6Q9BYQ5 205 aa9.58□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 UBE2OQ9C0C9 1292 aaKnown RBP9.58□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 IGFLR1Q9H665 355 aa9.58□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 EFCC1Q9HA90 598 aa9.58□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 LRFN2Q9ULH4 789 aa9.58□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 ACIN1Q9UKV3 1341 aaKnown RBP9.57□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 FAM69CQ0P6D2 419 aa9.57□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 CCINQ13939 588 aa9.57□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 SWI5Q1ZZU3 235 aa9.57□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 C11orf91Q3C1V1 193 aa9.57□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 PNMA5Q96PV4 448 aa9.57□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.57□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 PRMT3O60678 531 aa9.56□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 MICAL2O94851 1124 aa9.56□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 SPATA31C1P0DKV0 1188 aa9.56□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 NFKB1P19838 968 aa9.56□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 SLC6A14Q9UN76 642 aa9.56□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 ADAM23O75077 832 aa9.55□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 NID1P14543 1247 aa9.55□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 EPB42P16452 691 aa9.55□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 ARSDP51689 593 aa9.55□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 OCLNQ16625 522 aa9.55□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 DNAJB12Q9NXW2 375 aaKnown RBP9.55□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 SPDYE3A6NKU9 549 aa9.54□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 FAM229AH3BQW9 127 aa9.54□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 IFT43Q96FT9 208 aa9.54□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.54□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 OPLAHO14841 1288 aa9.53□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 ATG7O95352 703 aa9.53□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 COX20Q5RI15 118 aa9.53□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 ZFATQ9P243 1243 aa9.53□□□□□ -0.88
PCDH9-AS4-201ENST00000456459 LILRB5O75023 590 aa9.52□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 TARSP26639 723 aaKnown RBP9.52□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 PRRT3Q5FWE3 981 aa9.52□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 KRT25Q7Z3Z0 450 aa9.52□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 NUDT8Q8WV74 236 aa9.52□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 NAGPAQ9UK23 515 aa9.52□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 USP20Q9Y2K6 914 aa9.52□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 FURINP09958 794 aa9.51□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 TMEM164Q5U3C3 297 aa9.51□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 SAP130Q9H0E3 1048 aa9.51□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 JPH1Q9HDC5 661 aaPredicted RBP9.51□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 MAP3K6O95382 1288 aa9.5□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 PSAPL1Q6NUJ1 521 aa9.5□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 TREML1Q86YW5 311 aa9.5□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 C11orf16Q9NQ32 467 aa9.5□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 RTCBQ9Y3I0 505 aaKnown RBP9.5□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 K7ELQ4 463 aaPredicted RBP9.49□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 SASH3O75995 380 aa9.49□□□□□ -0.89
PCDH9-AS4-201ENST00000456459 TRIM28Q13263 835 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms