RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 DNAJC25Q9H1X3 360 aa16.2■□□□□ 0.18
PTPRE-204ENST00000455661 BABAM1Q9NWV8 329 aa16.2■□□□□ 0.18
PTPRE-204ENST00000455661 TFIP11Q9UBB9 837 aaKnown RBP16.2■□□□□ 0.18
PTPRE-204ENST00000455661 KDRP35968 1356 aa16.2■□□□□ 0.18
PTPRE-204ENST00000455661 SLFN14P0C7P3 912 aa16.2■□□□□ 0.18
PTPRE-204ENST00000455661 NAA30Q147X3 362 aaPredicted RBP16.2■□□□□ 0.18
PTPRE-204ENST00000455661 PTPN14Q15678 1187 aa16.2■□□□□ 0.18
PTPRE-204ENST00000455661 CREB3L3Q68CJ9 461 aa16.2■□□□□ 0.18
PTPRE-204ENST00000455661 EVI5LQ96CN4 794 aa16.2■□□□□ 0.18
PTPRE-204ENST00000455661 ECHDC1Q9NTX5 307 aa16.2■□□□□ 0.18
PTPRE-204ENST00000455661 RBM8AQ9Y5S9 174 aaKnown RBP16.2■□□□□ 0.18
PTPRE-204ENST00000455661 CCDC66A2RUB6 948 aa16.19■□□□□ 0.18
PTPRE-204ENST00000455661 LRRC8AQ8IWT6 810 aa16.19■□□□□ 0.18
PTPRE-204ENST00000455661 DDX54Q8TDD1 881 aaKnown RBP16.19■□□□□ 0.18
PTPRE-204ENST00000455661 CRYBG1Q9Y4K1 1723 aa16.19■□□□□ 0.18
PTPRE-204ENST00000455661 ADGRL3Q9HAR2 1447 aa16.19■□□□□ 0.18
PTPRE-204ENST00000455661 HIP1O00291 1037 aa16.19■□□□□ 0.18
PTPRE-204ENST00000455661 TAF7Q15545 349 aaPredicted RBP16.19■□□□□ 0.18
PTPRE-204ENST00000455661 PHAXQ9H814 394 aaKnown RBP16.19■□□□□ 0.18
PTPRE-204ENST00000455661 RIMS1Q86UR5 1692 aaKnown RBP16.19■□□□□ 0.18
PTPRE-204ENST00000455661 FLT4P35916 1363 aa16.19■□□□□ 0.18
PTPRE-204ENST00000455661 NR1I2O75469 434 aa16.18■□□□□ 0.18
PTPRE-204ENST00000455661 RBM6P78332 1123 aaKnown RBP16.18■□□□□ 0.18
PTPRE-204ENST00000455661 RNF20Q5VTR2 975 aa16.18■□□□□ 0.18
PTPRE-204ENST00000455661 BLOC1S2Q6QNY1 142 aa16.18■□□□□ 0.18
PTPRE-204ENST00000455661 EYA1Q99502 592 aa16.18■□□□□ 0.18
PTPRE-204ENST00000455661 SBNO1A3KN83 1393 aa16.18■□□□□ 0.18
PTPRE-204ENST00000455661 IFIT2P09913 472 aaKnown RBP16.18■□□□□ 0.18
PTPRE-204ENST00000455661 NBPF7P0C2Y1 421 aaPredicted RBP16.18■□□□□ 0.18
PTPRE-204ENST00000455661 AMPHP49418 695 aa16.18■□□□□ 0.18
PTPRE-204ENST00000455661 TERF2Q15554 542 aa16.18■□□□□ 0.18
PTPRE-204ENST00000455661 CCDC144BQ3MJ40 725 aa16.18■□□□□ 0.18
PTPRE-204ENST00000455661 SARM1Q6SZW1 724 aa16.18■□□□□ 0.18
PTPRE-204ENST00000455661 CCDC144CPQ8IYA2 1237 aa16.18■□□□□ 0.18
PTPRE-204ENST00000455661 NALCNQ8IZF0 1738 aa16.18■□□□□ 0.18
PTPRE-204ENST00000455661 CHD2O14647 1828 aaKnown RBP16.18■□□□□ 0.18
PTPRE-204ENST00000455661 IGSF1Q8N6C5 1336 aa16.17■□□□□ 0.18
PTPRE-204ENST00000455661 TECPR2O15040 1411 aa16.17■□□□□ 0.18
PTPRE-204ENST00000455661 PLEKHG3A1L390 1219 aa16.17■□□□□ 0.18
PTPRE-204ENST00000455661 MRFAP1L1Q96HT8 127 aa16.17■□□□□ 0.18
PTPRE-204ENST00000455661 USP6P35125 1406 aa16.17■□□□□ 0.18
PTPRE-204ENST00000455661 LARP1Q6PKG0 1096 aaKnown RBP16.17■□□□□ 0.18
PTPRE-204ENST00000455661 MAP4K1Q92918 833 aa16.17■□□□□ 0.18
PTPRE-204ENST00000455661 ERO1AQ96HE7 468 aa16.17■□□□□ 0.18
PTPRE-204ENST00000455661 NRXN3Q9Y4C0 1643 aa16.16■□□□□ 0.18
PTPRE-204ENST00000455661 ERC1Q8IUD2 1116 aa16.16■□□□□ 0.18
PTPRE-204ENST00000455661 ALDH8A1Q9H2A2 487 aaPredicted RBP16.16■□□□□ 0.18
PTPRE-204ENST00000455661 LRRC37A3O60309 1634 aa16.16■□□□□ 0.18
PTPRE-204ENST00000455661 SLC27A2O14975 620 aa16.16■□□□□ 0.18
PTPRE-204ENST00000455661 SKILP12757 684 aa16.16■□□□□ 0.18
PTPRE-204ENST00000455661 HDGFP51858 240 aaKnown RBP16.16■□□□□ 0.18
PTPRE-204ENST00000455661 FGD1P98174 961 aa16.16■□□□□ 0.18
PTPRE-204ENST00000455661 KMT5BQ4FZB7 885 aa16.16■□□□□ 0.18
PTPRE-204ENST00000455661 CHMP4AQ9BY43 222 aa16.16■□□□□ 0.18
PTPRE-204ENST00000455661 ZNF215Q9UL58 517 aaPredicted RBP16.16■□□□□ 0.18
PTPRE-204ENST00000455661 FMN2Q9NZ56 1722 aa16.15■□□□□ 0.18
PTPRE-204ENST00000455661 KIF2AO00139 706 aaPredicted RBP16.15■□□□□ 0.18
PTPRE-204ENST00000455661 GIGYF1O75420 1035 aaPredicted RBP16.15■□□□□ 0.18
PTPRE-204ENST00000455661 NYAP1Q6ZVC0 841 aa16.15■□□□□ 0.18
PTPRE-204ENST00000455661 CFAP45Q9UL16 551 aa16.15■□□□□ 0.18
PTPRE-204ENST00000455661 BECN2A8MW95 431 aa16.14■□□□□ 0.18
PTPRE-204ENST00000455661 CTAGE5O15320 804 aa16.14■□□□□ 0.18
PTPRE-204ENST00000455661 RPS6KB1P23443 525 aa16.14■□□□□ 0.18
PTPRE-204ENST00000455661 FAM193AP78312 1265 aa16.14■□□□□ 0.18
PTPRE-204ENST00000455661 DNAAF4Q8WXU2 420 aa16.14■□□□□ 0.18
PTPRE-204ENST00000455661 PGBD1Q96JS3 809 aa16.14■□□□□ 0.18
PTPRE-204ENST00000455661 IQCB1Q15051 598 aa16.14■□□□□ 0.17
PTPRE-204ENST00000455661 STX1AQ16623 288 aa16.14■□□□□ 0.17
PTPRE-204ENST00000455661 SLFNL1Q499Z3 407 aa16.14■□□□□ 0.17
PTPRE-204ENST00000455661 BEND3Q5T5X7 828 aa16.14■□□□□ 0.17
PTPRE-204ENST00000455661 IL17REQ8NFR9 667 aa16.14■□□□□ 0.17
PTPRE-204ENST00000455661 BBXQ8WY36 941 aaPredicted RBP16.14■□□□□ 0.17
PTPRE-204ENST00000455661 CEP170BQ9Y4F5 1589 aaPredicted RBP16.14■□□□□ 0.17
PTPRE-204ENST00000455661 SLU7O95391 586 aaKnown RBP16.13■□□□□ 0.17
PTPRE-204ENST00000455661 EIF2S2P20042 333 aaKnown RBP16.13■□□□□ 0.17
PTPRE-204ENST00000455661 NUTM2FA1L443 756 aa16.13■□□□□ 0.17
PTPRE-204ENST00000455661 USP27XA6NNY8 438 aa16.13■□□□□ 0.17
PTPRE-204ENST00000455661 NMIQ13287 307 aaPredicted RBP16.13■□□□□ 0.17
PTPRE-204ENST00000455661 BCL11BQ9C0K0 894 aaPredicted RBP16.13■□□□□ 0.17
PTPRE-204ENST00000455661 ZSCAN16Q9H4T2 348 aaPredicted RBP16.13■□□□□ 0.17
PTPRE-204ENST00000455661 HDAC5Q9UQL6 1122 aa16.13■□□□□ 0.17
PTPRE-204ENST00000455661 CCDC69A6NI79 296 aa16.12■□□□□ 0.17
PTPRE-204ENST00000455661 H3BQV1 296 aa16.12■□□□□ 0.17
PTPRE-204ENST00000455661 STK3Q13188 491 aa16.12■□□□□ 0.17
PTPRE-204ENST00000455661 IFFO2Q5TF58 517 aa16.12■□□□□ 0.17
PTPRE-204ENST00000455661 FAM227BQ96M60 508 aa16.12■□□□□ 0.17
PTPRE-204ENST00000455661 PI4KAP2A4QPH2 592 aa16.12■□□□□ 0.17
PTPRE-204ENST00000455661 MTX1Q13505 466 aa16.12■□□□□ 0.17
PTPRE-204ENST00000455661 AACSQ86V21 672 aa16.12■□□□□ 0.17
PTPRE-204ENST00000455661 CREBRFQ8IUR6 639 aa16.12■□□□□ 0.17
PTPRE-204ENST00000455661 PI4KAP1Q8N8J0 262 aa16.12■□□□□ 0.17
PTPRE-204ENST00000455661 TCEANC2Q96MN5 208 aa16.12■□□□□ 0.17
PTPRE-204ENST00000455661 FAM53CQ9NYF3 392 aa16.12■□□□□ 0.17
PTPRE-204ENST00000455661 HMG20BQ9P0W2 317 aa16.12■□□□□ 0.17
PTPRE-204ENST00000455661 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.12■□□□□ 0.17
PTPRE-204ENST00000455661 V9GYY5 206 aaPredicted RBP16.12■□□□□ 0.17
PTPRE-204ENST00000455661 TOB2Q14106 344 aaPredicted RBP16.11■□□□□ 0.17
PTPRE-204ENST00000455661 ELF2Q15723 593 aa16.11■□□□□ 0.17
PTPRE-204ENST00000455661 FBXO38Q6PIJ6 1188 aa16.11■□□□□ 0.17
PTPRE-204ENST00000455661 FILIP1Q7Z7B0 1213 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms