RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 NUP188Q5SRE5 1749 aa15.05■□□□□ 0
ECHDC1-209ENST00000454591 PHF14O94880 888 aa15.05■□□□□ -0
ECHDC1-209ENST00000454591 SNRPA1P09661 255 aaKnown RBP15.05■□□□□ -0
ECHDC1-209ENST00000454591 NCLP19338 710 aaKnown RBP15.05■□□□□ -0
ECHDC1-209ENST00000454591 PTH1RQ03431 593 aa15.05■□□□□ -0
ECHDC1-209ENST00000454591 AACSQ86V21 672 aa15.05■□□□□ -0
ECHDC1-209ENST00000454591 ZSCAN30Q86W11 494 aa15.05■□□□□ -0
ECHDC1-209ENST00000454591 ATP6V1DQ9Y5K8 247 aa15.05■□□□□ -0
ECHDC1-209ENST00000454591 RIC3Q7Z5B4 369 aa15.04■□□□□ -0
ECHDC1-209ENST00000454591 NSFL1CQ9UNZ2 370 aaKnown RBP15.04■□□□□ -0
ECHDC1-209ENST00000454591 RFX5P48382 616 aaPredicted RBP15.03■□□□□ -0
ECHDC1-209ENST00000454591 XAGE3Q8WTP9 111 aa15.03■□□□□ -0
ECHDC1-209ENST00000454591 ANO8Q9HCE9 1232 aaPredicted RBP15.03■□□□□ -0
ECHDC1-209ENST00000454591 RBM27Q9P2N5 1060 aaKnown RBP15.03■□□□□ -0
ECHDC1-209ENST00000454591 CYP46A1Q9Y6A2 500 aa15.03■□□□□ -0
ECHDC1-209ENST00000454591 STX6O43752 255 aa15.02■□□□□ -0
ECHDC1-209ENST00000454591 LETM1O95202 739 aaPredicted RBP15.02■□□□□ -0
ECHDC1-209ENST00000454591 ZKSCAN1P17029 563 aaPredicted RBP15.02■□□□□ -0
ECHDC1-209ENST00000454591 ATP5JP18859 108 aa15.02■□□□□ -0
ECHDC1-209ENST00000454591 CASTP20810 708 aaKnown RBP15.02■□□□□ -0
ECHDC1-209ENST00000454591 PSMA5P28066 241 aa15.02■□□□□ -0
ECHDC1-209ENST00000454591 MCM5P33992 734 aa15.02■□□□□ -0
ECHDC1-209ENST00000454591 USPL1Q5W0Q7 1092 aa15.02■□□□□ -0
ECHDC1-209ENST00000454591 ZNF496Q96IT1 587 aaPredicted RBP15.02■□□□□ -0
ECHDC1-209ENST00000454591 FMNL2Q96PY5 1086 aa15.02■□□□□ -0
ECHDC1-209ENST00000454591 PDRG1Q9NUG6 133 aa15.02■□□□□ -0
ECHDC1-209ENST00000454591 HMG20BQ9P0W2 317 aa15.02■□□□□ -0
ECHDC1-209ENST00000454591 SPEF2Q9C093 1822 aa15.02□□□□□ -0.01
ECHDC1-209ENST00000454591 F13A1P00488 732 aa15.02□□□□□ -0.01
ECHDC1-209ENST00000454591 ATF3P18847 181 aa15.02□□□□□ -0.01
ECHDC1-209ENST00000454591 SYT1P21579 422 aa15.02□□□□□ -0.01
ECHDC1-209ENST00000454591 UVSSAQ2YD98 709 aa15.02□□□□□ -0.01
ECHDC1-209ENST00000454591 CREB3L3Q68CJ9 461 aa15.02□□□□□ -0.01
ECHDC1-209ENST00000454591 LMOD2Q6P5Q4 547 aa15.02□□□□□ -0.01
ECHDC1-209ENST00000454591 ANKRD13DQ6ZTN6 518 aa15.02□□□□□ -0.01
ECHDC1-209ENST00000454591 COPS6Q7L5N1 327 aa15.02□□□□□ -0.01
ECHDC1-209ENST00000454591 FAM184AQ8NB25 1140 aa15.02□□□□□ -0.01
ECHDC1-209ENST00000454591 NLRP2Q9NX02 1062 aa15.02□□□□□ -0.01
ECHDC1-209ENST00000454591 SMC3Q9UQE7 1217 aa15.02□□□□□ -0.01
ECHDC1-209ENST00000454591 RBM8AQ9Y5S9 174 aaKnown RBP15.02□□□□□ -0.01
ECHDC1-209ENST00000454591 SPATA31A3Q5VYP0 1347 aa15.01□□□□□ -0.01
ECHDC1-209ENST00000454591 TJP1Q07157 1748 aa15.01□□□□□ -0.01
ECHDC1-209ENST00000454591 CYP27B1O15528 508 aa15.01□□□□□ -0.01
ECHDC1-209ENST00000454591 CASP7P55210 303 aa15.01□□□□□ -0.01
ECHDC1-209ENST00000454591 ZC3H6P61129 1189 aaKnown RBP15.01□□□□□ -0.01
ECHDC1-209ENST00000454591 NMIQ13287 307 aaPredicted RBP15.01□□□□□ -0.01
ECHDC1-209ENST00000454591 ANKRD1Q15327 319 aa15.01□□□□□ -0.01
ECHDC1-209ENST00000454591 CSPP1Q1MSJ5 1256 aa15.01□□□□□ -0.01
ECHDC1-209ENST00000454591 USP48Q86UV5 1035 aa15.01□□□□□ -0.01
ECHDC1-209ENST00000454591 NFATC2IPQ8NCF5 419 aa15.01□□□□□ -0.01
ECHDC1-209ENST00000454591 JAKMIP1Q96N16 626 aaKnown RBP15.01□□□□□ -0.01
ECHDC1-209ENST00000454591 XIRP1Q702N8 1843 aaKnown RBP15.01□□□□□ -0.01
ECHDC1-209ENST00000454591 SYCE3A1L190 88 aa15□□□□□ -0.01
ECHDC1-209ENST00000454591 UBE2HP62256 183 aa15□□□□□ -0.01
ECHDC1-209ENST00000454591 SLC39A6Q13433 755 aa15□□□□□ -0.01
ECHDC1-209ENST00000454591 ADCK5Q3MIX3 580 aa15□□□□□ -0.01
ECHDC1-209ENST00000454591 RNF20Q5VTR2 975 aa15□□□□□ -0.01
ECHDC1-209ENST00000454591 PRPF40BQ6NWY9 871 aaKnown RBP15□□□□□ -0.01
ECHDC1-209ENST00000454591 NOL8Q76FK4 1167 aaKnown RBP15□□□□□ -0.01
ECHDC1-209ENST00000454591 CADPS2Q86UW7 1296 aa15□□□□□ -0.01
ECHDC1-209ENST00000454591 PLBD2Q8NHP8 589 aa15□□□□□ -0.01
ECHDC1-209ENST00000454591 TSPY26PQ9H489 355 aa15□□□□□ -0.01
ECHDC1-209ENST00000454591 NOL7Q9UMY1 257 aaKnown RBP15□□□□□ -0.01
ECHDC1-209ENST00000454591 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15□□□□□ -0.01
ECHDC1-209ENST00000454591 SLC27A2O14975 620 aa14.99□□□□□ -0.01
ECHDC1-209ENST00000454591 ZNF500O60304 480 aaPredicted RBP14.99□□□□□ -0.01
ECHDC1-209ENST00000454591 PTPN12Q05209 780 aaKnown RBP14.99□□□□□ -0.01
ECHDC1-209ENST00000454591 EPHA10Q5JZY3 1008 aa14.99□□□□□ -0.01
ECHDC1-209ENST00000454591 CHAMP1Q96JM3 812 aa14.99□□□□□ -0.01
ECHDC1-209ENST00000454591 MYD88Q99836 296 aa14.99□□□□□ -0.01
ECHDC1-209ENST00000454591 GPR108Q9NPR9 543 aa14.99□□□□□ -0.01
ECHDC1-209ENST00000454591 SHANK3Q9BYB0 1731 aa14.99□□□□□ -0.01
ECHDC1-209ENST00000454591 LARGE1O95461 756 aa14.98□□□□□ -0.01
ECHDC1-209ENST00000454591 TERF1P54274 439 aa14.98□□□□□ -0.01
ECHDC1-209ENST00000454591 ST3GAL1Q11201 340 aa14.98□□□□□ -0.01
ECHDC1-209ENST00000454591 AIMP1Q12904 312 aaKnown RBP14.98□□□□□ -0.01
ECHDC1-209ENST00000454591 CCDC183Q5T5S1 534 aa14.98□□□□□ -0.01
ECHDC1-209ENST00000454591 TTC5Q8N0Z6 440 aa14.98□□□□□ -0.01
ECHDC1-209ENST00000454591 MTMR6Q9Y217 621 aa14.98□□□□□ -0.01
ECHDC1-209ENST00000454591 USP16Q9Y5T5 823 aa14.98□□□□□ -0.01
ECHDC1-209ENST00000454591 KCPQ6ZWJ8 1503 aa14.98□□□□□ -0.01
ECHDC1-209ENST00000454591 KRT32Q14532 448 aa14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 FOXD4L5Q5VV16 416 aaPredicted RBP14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 FOXD4L4Q8WXT5 416 aaPredicted RBP14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 FAM227BQ96M60 508 aa14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 CCDC8Q9H0W5 538 aaPredicted RBP14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 TLR7Q9NYK1 1049 aaKnown RBP14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 TNS2Q63HR2 1409 aa14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 ABCA3Q99758 1704 aa14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 A0A0D9SFI3 127 aa14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 H7C1W4 665 aa14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 GADD45BO75293 160 aaPredicted RBP14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 GJB2P29033 226 aa14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 NKX1-1Q15270 411 aaPredicted RBP14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 TNNI3KQ59H18 835 aa14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 FSD1Q9BTV5 496 aa14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 FPGT-TNNI3KV9GXZ4 949 aa14.97□□□□□ -0.01
ECHDC1-209ENST00000454591 PALLDQ8WX93 1383 aa14.96□□□□□ -0.01
ECHDC1-209ENST00000454591 ERVV-2B6SEH9 535 aa14.96□□□□□ -0.02
ECHDC1-209ENST00000454591 TAF5LO75529 589 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms