RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 BRCA1P38398 1863 aaKnown RBP24.56■■□□□ 1.52
NCL-205ENST00000453992 ATP5J2-PTCD1G3V325 749 aa24.56■■□□□ 1.52
NCL-205ENST00000453992 TGFB2P61812 414 aa24.55■■□□□ 1.52
NCL-205ENST00000453992 BRIP1Q9BX63 1249 aa24.55■■□□□ 1.52
NCL-205ENST00000453992 TNRC6CQ9HCJ0 1690 aaKnown RBP24.55■■□□□ 1.52
NCL-205ENST00000453992 COL11A2P13942 1736 aaPredicted RBP24.55■■□□□ 1.52
NCL-205ENST00000453992 FAM177BA6PVY3 158 aa24.54■■□□□ 1.52
NCL-205ENST00000453992 GTF2E1P29083 439 aaPredicted RBP24.54■■□□□ 1.52
NCL-205ENST00000453992 LINS1Q8NG48 757 aa24.54■■□□□ 1.52
NCL-205ENST00000453992 CWC25Q9NXE8 425 aaPredicted RBP24.54■■□□□ 1.52
NCL-205ENST00000453992 UTRNP46939 3433 aa24.54■■□□□ 1.52
NCL-205ENST00000453992 DDX60Q8IY21 1712 aaKnown RBP24.54■■□□□ 1.52
NCL-205ENST00000453992 ABCC12Q96J65 1359 aa24.54■■□□□ 1.52
NCL-205ENST00000453992 F6X3S4 739 aa24.53■■□□□ 1.52
NCL-205ENST00000453992 IGKV5-2P06315 115 aa24.53■■□□□ 1.52
NCL-205ENST00000453992 ARHGAP45Q92619 1136 aa24.53■■□□□ 1.52
NCL-205ENST00000453992 NOB1Q9ULX3 412 aaKnown RBP24.53■■□□□ 1.52
NCL-205ENST00000453992 PDZRN3Q9UPQ7 1066 aa24.53■■□□□ 1.52
NCL-205ENST00000453992 SH3TC1Q8TE82 1336 aa24.53■■□□□ 1.52
NCL-205ENST00000453992 NEURL1BA8MQ27 555 aa24.52■■□□□ 1.52
NCL-205ENST00000453992 PDE6BP35913 854 aa24.52■■□□□ 1.52
NCL-205ENST00000453992 API5Q9BZZ5 524 aaKnown RBP24.52■■□□□ 1.52
NCL-205ENST00000453992 TRMT112Q9UI30 125 aaKnown RBP24.52■■□□□ 1.52
NCL-205ENST00000453992 IPO8O15397 1037 aaKnown RBP24.51■■□□□ 1.51
NCL-205ENST00000453992 BCAR3O75815 825 aa24.51■■□□□ 1.51
NCL-205ENST00000453992 ERFEQ4G0M1 354 aa24.51■■□□□ 1.51
NCL-205ENST00000453992 BEND3Q5T5X7 828 aa24.51■■□□□ 1.51
NCL-205ENST00000453992 NUTM1Q86Y26 1132 aa24.51■■□□□ 1.51
NCL-205ENST00000453992 CWF19L2Q2TBE0 894 aaKnown RBP24.49■■□□□ 1.51
NCL-205ENST00000453992 SLC10A5Q5PT55 438 aa24.49■■□□□ 1.51
NCL-205ENST00000453992 CCDC24Q8N4L8 307 aa24.49■■□□□ 1.51
NCL-205ENST00000453992 ZBTB38Q8NAP3 1195 aaPredicted RBP24.49■■□□□ 1.51
NCL-205ENST00000453992 GOLGB1Q14789 3259 aaKnown RBP24.49■■□□□ 1.51
NCL-205ENST00000453992 MYH3P11055 1940 aa24.49■■□□□ 1.51
NCL-205ENST00000453992 KLRG2A4D1S0 409 aaPredicted RBP24.48■■□□□ 1.51
NCL-205ENST00000453992 PCCAP05165 728 aaPredicted RBP24.48■■□□□ 1.51
NCL-205ENST00000453992 SLC4A10Q6U841 1118 aa24.48■■□□□ 1.51
NCL-205ENST00000453992 RCAN3Q9UKA8 241 aa24.48■■□□□ 1.51
NCL-205ENST00000453992 DCAF8L1A6NGE4 600 aa24.47■■□□□ 1.51
NCL-205ENST00000453992 ALDH1L1O75891 902 aa24.47■■□□□ 1.51
NCL-205ENST00000453992 HSP90B1P14625 803 aaKnown RBP24.47■■□□□ 1.51
NCL-205ENST00000453992 GCKRQ14397 625 aa24.47■■□□□ 1.51
NCL-205ENST00000453992 SRCIN1Q9C0H9 1055 aa24.47■■□□□ 1.51
NCL-205ENST00000453992 CDHR2Q9BYE9 1310 aa24.46■■□□□ 1.51
NCL-205ENST00000453992 DPEP1P16444 411 aa24.46■■□□□ 1.51
NCL-205ENST00000453992 C2CD5Q86YS7 1000 aa24.46■■□□□ 1.51
NCL-205ENST00000453992 FAM89AQ96GI7 184 aa24.46■■□□□ 1.51
NCL-205ENST00000453992 ARFGEF1Q9Y6D6 1849 aa24.45■■□□□ 1.5
NCL-205ENST00000453992 ABCC4O15439 1325 aa24.45■■□□□ 1.5
NCL-205ENST00000453992 H0YIN7 160 aa24.45■■□□□ 1.5
NCL-205ENST00000453992 CRY2Q49AN0 593 aa24.45■■□□□ 1.5
NCL-205ENST00000453992 ZKSCAN2Q63HK3 967 aa24.45■■□□□ 1.5
NCL-205ENST00000453992 ATF7IPQ6VMQ6 1270 aa24.45■■□□□ 1.5
NCL-205ENST00000453992 FRAT1Q92837 279 aaPredicted RBP24.45■■□□□ 1.5
NCL-205ENST00000453992 A0A0G2JLW4 131 aa24.44■■□□□ 1.5
NCL-205ENST00000453992 CCT4P50991 539 aaKnown RBP24.44■■□□□ 1.5
NCL-205ENST00000453992 CACNA1SQ13698 1873 aa24.43■■□□□ 1.5
NCL-205ENST00000453992 SRGNP10124 158 aa24.43■■□□□ 1.5
NCL-205ENST00000453992 TRIM27P14373 513 aa24.43■■□□□ 1.5
NCL-205ENST00000453992 CHRNA5P30532 468 aa24.43■■□□□ 1.5
NCL-205ENST00000453992 NLRP3Q96P20 1036 aa24.43■■□□□ 1.5
NCL-205ENST00000453992 H7C1W4 665 aa24.42■■□□□ 1.5
NCL-205ENST00000453992 IRS4O14654 1257 aaPredicted RBP24.42■■□□□ 1.5
NCL-205ENST00000453992 KCNA3P22001 575 aa24.42■■□□□ 1.5
NCL-205ENST00000453992 GPR162Q16538 588 aa24.42■■□□□ 1.5
NCL-205ENST00000453992 STYK1Q6J9G0 422 aa24.42■■□□□ 1.5
NCL-205ENST00000453992 PELP1Q8IZL8 1130 aaKnown RBP24.42■■□□□ 1.5
NCL-205ENST00000453992 SYNE4Q8N205 404 aa24.42■■□□□ 1.5
NCL-205ENST00000453992 HCLS1P14317 486 aaPredicted RBP24.41■■□□□ 1.5
NCL-205ENST00000453992 NPR1P16066 1061 aa24.41■■□□□ 1.5
NCL-205ENST00000453992 MASTLQ96GX5 879 aa24.41■■□□□ 1.5
NCL-205ENST00000453992 PIM2Q9P1W9 311 aa24.41■■□□□ 1.5
NCL-205ENST00000453992 GRM8O00222 908 aa24.4■■□□□ 1.5
NCL-205ENST00000453992 YBX3P16989 372 aaKnown RBP eCLIP24.4■■□□□ 1.56e-16■■■□□ 15.7
NCL-205ENST00000453992 RTL5Q5HYW3 569 aaPredicted RBP24.4■■□□□ 1.5
NCL-205ENST00000453992 UBE3BQ7Z3V4 1068 aa24.4■■□□□ 1.5
NCL-205ENST00000453992 CASP7P55210 303 aa24.39■■□□□ 1.49
NCL-205ENST00000453992 WWC3Q9ULE0 1092 aa24.39■■□□□ 1.49
NCL-205ENST00000453992 UTYO14607 1347 aa24.38■■□□□ 1.49
NCL-205ENST00000453992 PDE8AO60658 829 aa24.38■■□□□ 1.49
NCL-205ENST00000453992 HOXA10P31260 410 aaPredicted RBP24.38■■□□□ 1.49
NCL-205ENST00000453992 INTS3Q68E01 1043 aaKnown RBP24.38■■□□□ 1.49
NCL-205ENST00000453992 C3orf67Q6ZVT6 689 aa24.38■■□□□ 1.49
NCL-205ENST00000453992 RPGRQ92834 1020 aaKnown RBP24.38■■□□□ 1.49
NCL-205ENST00000453992 PLA2G12BQ9BX93 195 aa24.38■■□□□ 1.49
NCL-205ENST00000453992 C9orf78Q9NZ63 289 aaPredicted RBP24.38■■□□□ 1.49
NCL-205ENST00000453992 SF3B3Q15393 1217 aaKnown RBP24.37■■□□□ 1.49
NCL-205ENST00000453992 DALRD3Q5D0E6 543 aaKnown RBP24.37■■□□□ 1.49
NCL-205ENST00000453992 CNKSR1Q969H4 720 aa24.37■■□□□ 1.49
NCL-205ENST00000453992 SLX4Q8IY92 1834 aa24.36■■□□□ 1.49
NCL-205ENST00000453992 FTSJ3Q8IY81 847 aaKnown RBP24.36■■□□□ 1.49
NCL-205ENST00000453992 TTLL6Q8N841 843 aa24.36■■□□□ 1.49
NCL-205ENST00000453992 JARID2Q92833 1246 aaPredicted RBP24.36■■□□□ 1.49
NCL-205ENST00000453992 ZNF622Q969S3 477 aaKnown RBP eCLIP24.36■■□□□ 1.493e-24■■■■□ 22.8
NCL-205ENST00000453992 MS4A1P11836 297 aa24.35■■□□□ 1.49
NCL-205ENST00000453992 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.35■■□□□ 1.49
NCL-205ENST00000453992 RBM17Q96I25 401 aaKnown RBP24.35■■□□□ 1.49
NCL-205ENST00000453992 ALDH1B1P30837 517 aa24.34■■□□□ 1.49
NCL-205ENST00000453992 CTSWP56202 376 aa24.34■■□□□ 1.49
NCL-205ENST00000453992 DZIP1LQ8IYY4 767 aaKnown RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms