RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 COL9A1P20849 921 aa7.98□□□□□ -1.13
SBDSP1-204ENST00000453858 FECHP22830 423 aa7.98□□□□□ -1.13
SBDSP1-204ENST00000453858 CHRNA5P30532 468 aa7.98□□□□□ -1.13
SBDSP1-204ENST00000453858 ECE1P42892 770 aa7.98□□□□□ -1.13
SBDSP1-204ENST00000453858 AMHR2Q16671 573 aa7.98□□□□□ -1.13
SBDSP1-204ENST00000453858 PADI6Q6TGC4 694 aa7.98□□□□□ -1.13
SBDSP1-204ENST00000453858 NLGN1Q8N2Q7 840 aa7.98□□□□□ -1.13
SBDSP1-204ENST00000453858 CDK19Q9BWU1 502 aa7.98□□□□□ -1.13
SBDSP1-204ENST00000453858 COL25A1Q9BXS0 654 aaPredicted RBP7.98□□□□□ -1.13
SBDSP1-204ENST00000453858 CCDC87Q9NVE4 849 aa7.98□□□□□ -1.13
SBDSP1-204ENST00000453858 TRAK1Q9UPV9 953 aa7.98□□□□□ -1.13
SBDSP1-204ENST00000453858 TRIM6-TRIM34B2RNG4 842 aa7.97□□□□□ -1.13
SBDSP1-204ENST00000453858 DDNO94850 711 aaPredicted RBP7.97□□□□□ -1.13
SBDSP1-204ENST00000453858 PSEN2P49810 448 aa7.97□□□□□ -1.13
SBDSP1-204ENST00000453858 DMRTA1Q5VZB9 504 aa7.97□□□□□ -1.13
SBDSP1-204ENST00000453858 CST9Q5W186 159 aa7.97□□□□□ -1.13
SBDSP1-204ENST00000453858 CNTROBQ8N137 903 aa7.97□□□□□ -1.13
SBDSP1-204ENST00000453858 NLRP2Q9NX02 1062 aa7.97□□□□□ -1.13
SBDSP1-204ENST00000453858 ABT1Q9ULW3 272 aaKnown RBP7.97□□□□□ -1.13
SBDSP1-204ENST00000453858 ADGRB1O14514 1584 aa7.97□□□□□ -1.13
SBDSP1-204ENST00000453858 BRPF1P55201 1214 aaPredicted RBP7.96□□□□□ -1.14
SBDSP1-204ENST00000453858 TMF1P82094 1093 aa7.96□□□□□ -1.14
SBDSP1-204ENST00000453858 PDE4DQ08499 809 aa7.96□□□□□ -1.14
SBDSP1-204ENST00000453858 ADGRG1Q9Y653 693 aa7.96□□□□□ -1.14
SBDSP1-204ENST00000453858 PIEZO1Q92508 2521 aa7.95□□□□□ -1.14
SBDSP1-204ENST00000453858 ADAMTSL1Q8N6G6 1762 aa7.95□□□□□ -1.14
SBDSP1-204ENST00000453858 NBPF26B4DH59 902 aa7.95□□□□□ -1.14
SBDSP1-204ENST00000453858 NEUROD2Q15784 382 aa7.95□□□□□ -1.14
SBDSP1-204ENST00000453858 LINC00116Q8NCU8 138 aa7.95□□□□□ -1.14
SBDSP1-204ENST00000453858 ZBED2Q9BTP6 218 aa7.95□□□□□ -1.14
SBDSP1-204ENST00000453858 DDX21Q9NR30 783 aaKnown RBP eCLIP7.95□□□□□ -1.14
SBDSP1-204ENST00000453858 HPS5Q9UPZ3 1129 aa7.95□□□□□ -1.14
SBDSP1-204ENST00000453858 CCDC88AQ3V6T2 1871 aa7.95□□□□□ -1.14
SBDSP1-204ENST00000453858 GYS1P13807 737 aa7.94□□□□□ -1.14
SBDSP1-204ENST00000453858 FMR1Q06787 632 aaKnown RBP eCLIP7.94□□□□□ -1.14
SBDSP1-204ENST00000453858 MAP1SQ66K74 1059 aaPredicted RBP7.94□□□□□ -1.14
SBDSP1-204ENST00000453858 PRDM6Q9NQX0 595 aa7.94□□□□□ -1.14
SBDSP1-204ENST00000453858 TIAM2Q8IVF5 1701 aa7.94□□□□□ -1.14
SBDSP1-204ENST00000453858 DOT1LQ8TEK3 1739 aa7.94□□□□□ -1.14
SBDSP1-204ENST00000453858 PALLDQ8WX93 1383 aa7.94□□□□□ -1.14
SBDSP1-204ENST00000453858 C4AP0C0L4 1744 aa7.93□□□□□ -1.14
SBDSP1-204ENST00000453858 CLCN1P35523 988 aa7.93□□□□□ -1.14
SBDSP1-204ENST00000453858 NBPF1Q3BBV0 1214 aa7.93□□□□□ -1.14
SBDSP1-204ENST00000453858 METTL3Q86U44 580 aaKnown RBP7.93□□□□□ -1.14
SBDSP1-204ENST00000453858 KCNH5Q8NCM2 988 aa7.93□□□□□ -1.14
SBDSP1-204ENST00000453858 PXYLP1Q8TE99 480 aa7.93□□□□□ -1.14
SBDSP1-204ENST00000453858 ZIC5Q96T25 663 aa7.93□□□□□ -1.14
SBDSP1-204ENST00000453858 RABGEF1Q9UJ41 708 aa7.93□□□□□ -1.14
SBDSP1-204ENST00000453858 NFAT5O94916 1531 aa7.93□□□□□ -1.14
SBDSP1-204ENST00000453858 IQCA1LA6NCM1 817 aa7.92□□□□□ -1.14
SBDSP1-204ENST00000453858 ERFEQ4G0M1 354 aa7.92□□□□□ -1.14
SBDSP1-204ENST00000453858 CIAPIN1Q6FI81 312 aa7.92□□□□□ -1.14
SBDSP1-204ENST00000453858 TATDN2Q93075 761 aa7.92□□□□□ -1.14
SBDSP1-204ENST00000453858 VPS9D1Q9Y2B5 631 aa7.92□□□□□ -1.14
SBDSP1-204ENST00000453858 TLL2Q9Y6L7 1015 aa7.92□□□□□ -1.14
SBDSP1-204ENST00000453858 DDR1Q08345 913 aa7.91□□□□□ -1.14
SBDSP1-204ENST00000453858 GRM1Q13255 1194 aa7.91□□□□□ -1.14
SBDSP1-204ENST00000453858 ITPK1Q13572 414 aa7.91□□□□□ -1.14
SBDSP1-204ENST00000453858 EYA1Q99502 592 aa7.91□□□□□ -1.14
SBDSP1-204ENST00000453858 PARP3Q9Y6F1 533 aa7.91□□□□□ -1.14
SBDSP1-204ENST00000453858 DICER1Q9UPY3 1922 aaKnown RBP7.9□□□□□ -1.14
SBDSP1-204ENST00000453858 MAP2P11137 1827 aaKnown RBP7.9□□□□□ -1.14
SBDSP1-204ENST00000453858 SCN4AP35499 1836 aa7.9□□□□□ -1.14
SBDSP1-204ENST00000453858 TMEM132AQ24JP5 1023 aa7.9□□□□□ -1.14
SBDSP1-204ENST00000453858 CTU1Q7Z7A3 348 aaKnown RBP7.9□□□□□ -1.14
SBDSP1-204ENST00000453858 SAPCD2Q86UD0 394 aa7.9□□□□□ -1.14
SBDSP1-204ENST00000453858 ZCRB1Q8TBF4 217 aaKnown RBP7.9□□□□□ -1.14
SBDSP1-204ENST00000453858 ANKRD24Q8TF21 1146 aa7.9□□□□□ -1.14
SBDSP1-204ENST00000453858 GPCPD1Q9NPB8 672 aa7.9□□□□□ -1.14
SBDSP1-204ENST00000453858 KIAA1468Q9P260 1216 aa7.9□□□□□ -1.14
SBDSP1-204ENST00000453858 FAM198AQ9UFP1 575 aa7.9□□□□□ -1.14
SBDSP1-204ENST00000453858 PNMA3Q9UL41 463 aa7.9□□□□□ -1.14
SBDSP1-204ENST00000453858 KIAA0100Q14667 2235 aaKnown RBP7.9□□□□□ -1.15
SBDSP1-204ENST00000453858 INSRP06213 1382 aa7.89□□□□□ -1.15
SBDSP1-204ENST00000453858 BHMG1C9JSJ3 638 aaPredicted RBP7.89□□□□□ -1.15
SBDSP1-204ENST00000453858 DNAJB2P25686 324 aa7.89□□□□□ -1.15
SBDSP1-204ENST00000453858 TTLL12Q14166 644 aaPredicted RBP7.89□□□□□ -1.15
SBDSP1-204ENST00000453858 PROX2Q3B8N5 592 aa7.89□□□□□ -1.15
SBDSP1-204ENST00000453858 TRAPPC3LQ5T215 181 aa7.89□□□□□ -1.15
SBDSP1-204ENST00000453858 NUDT18Q6ZVK8 323 aa7.89□□□□□ -1.15
SBDSP1-204ENST00000453858 LAPTM4BQ86VI4 370 aa7.89□□□□□ -1.15
SBDSP1-204ENST00000453858 HHIPL1Q96JK4 782 aa7.89□□□□□ -1.15
SBDSP1-204ENST00000453858 STAC3Q96MF2 364 aa7.89□□□□□ -1.15
SBDSP1-204ENST00000453858 NBPF3Q9H094 633 aa7.89□□□□□ -1.15
SBDSP1-204ENST00000453858 KDM4CQ9H3R0 1056 aa7.89□□□□□ -1.15
SBDSP1-204ENST00000453858 PLA2G2EQ9NZK7 142 aa7.89□□□□□ -1.15
SBDSP1-204ENST00000453858 LOC102724428A0A0B4J2F2 783 aa7.88□□□□□ -1.15
SBDSP1-204ENST00000453858 SIK1P57059 783 aa7.88□□□□□ -1.15
SBDSP1-204ENST00000453858 EAPPQ56P03 285 aaPredicted RBP7.88□□□□□ -1.15
SBDSP1-204ENST00000453858 PARP9Q8IXQ6 854 aa7.88□□□□□ -1.15
SBDSP1-204ENST00000453858 TMUB1Q9BVT8 246 aa7.88□□□□□ -1.15
SBDSP1-204ENST00000453858 BDP1A6H8Y1 2624 aa7.87□□□□□ -1.15
SBDSP1-204ENST00000453858 RCCD1A6NED2 376 aa7.87□□□□□ -1.15
SBDSP1-204ENST00000453858 TM4SF1P30408 202 aa7.87□□□□□ -1.15
SBDSP1-204ENST00000453858 EPHX2P34913 555 aa7.87□□□□□ -1.15
SBDSP1-204ENST00000453858 MPRIPQ6WCQ1 1025 aa7.87□□□□□ -1.15
SBDSP1-204ENST00000453858 PNMA8AQ86V59 439 aaPredicted RBP7.87□□□□□ -1.15
SBDSP1-204ENST00000453858 TTLL6Q8N841 843 aa7.87□□□□□ -1.15
SBDSP1-204ENST00000453858 SMARCC1Q92922 1105 aaPredicted RBP7.87□□□□□ -1.15
SBDSP1-204ENST00000453858 DDRGK1Q96HY6 314 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms