RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 ZNF622Q969S3 477 aaKnown RBP eCLIP18.84■□□□□ 0.61
VPS16-205ENST00000453689 YTHDC1Q96MU7 727 aaKnown RBP18.84■□□□□ 0.61
VPS16-205ENST00000453689 TAF1P21675 1872 aa18.84■□□□□ 0.61
VPS16-205ENST00000453689 RIC1Q4ADV7 1423 aa18.83■□□□□ 0.61
VPS16-205ENST00000453689 DICER1Q9UPY3 1922 aaKnown RBP18.83■□□□□ 0.6
VPS16-205ENST00000453689 VAMP4O75379 141 aa18.83■□□□□ 0.6
VPS16-205ENST00000453689 SRGNP10124 158 aa18.83■□□□□ 0.6
VPS16-205ENST00000453689 TTLL6Q8N841 843 aa18.83■□□□□ 0.6
VPS16-205ENST00000453689 STK31Q9BXU1 1019 aa18.83■□□□□ 0.6
VPS16-205ENST00000453689 SLFN5Q08AF3 891 aa18.82■□□□□ 0.6
VPS16-205ENST00000453689 NLRP10Q86W26 655 aa18.82■□□□□ 0.6
VPS16-205ENST00000453689 MYH3P11055 1940 aa18.82■□□□□ 0.6
VPS16-205ENST00000453689 KLRG2A4D1S0 409 aaPredicted RBP18.81■□□□□ 0.6
VPS16-205ENST00000453689 STYK1Q6J9G0 422 aa18.81■□□□□ 0.6
VPS16-205ENST00000453689 ARHGAP27Q6ZUM4 889 aa18.81■□□□□ 0.6
VPS16-205ENST00000453689 RIC3Q7Z5B4 369 aa18.81■□□□□ 0.6
VPS16-205ENST00000453689 CDCA7LQ96GN5 454 aa18.81■□□□□ 0.6
VPS16-205ENST00000453689 MASTLQ96GX5 879 aa18.81■□□□□ 0.6
VPS16-205ENST00000453689 UTP14AQ9BVJ6 771 aaKnown RBP18.81■□□□□ 0.6
VPS16-205ENST00000453689 ISCA1Q9BUE6 129 aa18.8■□□□□ 0.6
VPS16-205ENST00000453689 RNF123Q5XPI4 1314 aa18.79■□□□□ 0.6
VPS16-205ENST00000453689 ATP5J2-PTCD1G3V325 749 aa18.79■□□□□ 0.6
VPS16-205ENST00000453689 DDX58O95786 925 aaKnown RBP18.79■□□□□ 0.6
VPS16-205ENST00000453689 SLC4A2P04920 1241 aa18.79■□□□□ 0.6
VPS16-205ENST00000453689 G2E3Q7L622 706 aa18.79■□□□□ 0.6
VPS16-205ENST00000453689 TIAM2Q8IVF5 1701 aa18.79■□□□□ 0.6
VPS16-205ENST00000453689 NPR1P16066 1061 aa18.78■□□□□ 0.6
VPS16-205ENST00000453689 TRMT2AQ8IZ69 625 aaKnown RBP18.78■□□□□ 0.6
VPS16-205ENST00000453689 CNKSR1Q969H4 720 aa18.78■□□□□ 0.6
VPS16-205ENST00000453689 ADCY9O60503 1353 aa18.78■□□□□ 0.6
VPS16-205ENST00000453689 CRY2Q49AN0 593 aa18.77■□□□□ 0.6
VPS16-205ENST00000453689 SYNE4Q8N205 404 aa18.77■□□□□ 0.6
VPS16-205ENST00000453689 ZNF428Q96B54 188 aa18.77■□□□□ 0.6
VPS16-205ENST00000453689 TRMT112Q9UI30 125 aaKnown RBP18.77■□□□□ 0.6
VPS16-205ENST00000453689 TRIM28Q13263 835 aaKnown RBP18.76■□□□□ 0.59
VPS16-205ENST00000453689 SLC10A5Q5PT55 438 aa18.76■□□□□ 0.59
VPS16-205ENST00000453689 PRPF40BQ6NWY9 871 aaKnown RBP18.76■□□□□ 0.59
VPS16-205ENST00000453689 C3orf67Q6ZVT6 689 aa18.76■□□□□ 0.59
VPS16-205ENST00000453689 MYD88Q99836 296 aa18.76■□□□□ 0.59
VPS16-205ENST00000453689 MAP3K2Q9Y2U5 619 aa18.76■□□□□ 0.59
VPS16-205ENST00000453689 SH3TC1Q8TE82 1336 aa18.75■□□□□ 0.59
VPS16-205ENST00000453689 PI4KAP2A4QPH2 592 aa18.75■□□□□ 0.59
VPS16-205ENST00000453689 C21orf2O43822 256 aa18.75■□□□□ 0.59
VPS16-205ENST00000453689 FLIIQ13045 1269 aa18.75■□□□□ 0.59
VPS16-205ENST00000453689 KSR2Q6VAB6 950 aa18.75■□□□□ 0.59
VPS16-205ENST00000453689 PI4KAP1Q8N8J0 262 aa18.75■□□□□ 0.59
VPS16-205ENST00000453689 METTL22Q9BUU2 404 aaPredicted RBP18.75■□□□□ 0.59
VPS16-205ENST00000453689 ZNF219Q9P2Y4 722 aaPredicted RBP18.75■□□□□ 0.59
VPS16-205ENST00000453689 NLRP3Q96P20 1036 aa18.74■□□□□ 0.59
VPS16-205ENST00000453689 HCLS1P14317 486 aaPredicted RBP18.73■□□□□ 0.59
VPS16-205ENST00000453689 RASSF7Q02833 373 aa18.73■□□□□ 0.59
VPS16-205ENST00000453689 ZNF784Q8NCA9 323 aaPredicted RBP18.73■□□□□ 0.59
VPS16-205ENST00000453689 RPGRQ92834 1020 aaKnown RBP18.73■□□□□ 0.59
VPS16-205ENST00000453689 FAM89AQ96GI7 184 aa18.73■□□□□ 0.59
VPS16-205ENST00000453689 SPEF2Q9C093 1822 aa18.72■□□□□ 0.59
VPS16-205ENST00000453689 ALDH1B1P30837 517 aa18.72■□□□□ 0.59
VPS16-205ENST00000453689 HOXA10P31260 410 aaPredicted RBP18.72■□□□□ 0.59
VPS16-205ENST00000453689 FKBP5Q13451 457 aaPredicted RBP18.72■□□□□ 0.59
VPS16-205ENST00000453689 CCDC191Q8NCU4 936 aa18.72■□□□□ 0.59
VPS16-205ENST00000453689 NFKBIEO00221 500 aa18.71■□□□□ 0.59
VPS16-205ENST00000453689 RTL5Q5HYW3 569 aaPredicted RBP18.71■□□□□ 0.59
VPS16-205ENST00000453689 C7orf43Q8WVR3 580 aa18.71■□□□□ 0.59
VPS16-205ENST00000453689 LRRC37AA6NMS7 1700 aa18.7■□□□□ 0.58
VPS16-205ENST00000453689 IGKV5-2P06315 115 aa18.7■□□□□ 0.58
VPS16-205ENST00000453689 ZBTB38Q8NAP3 1195 aaPredicted RBP18.7■□□□□ 0.58
VPS16-205ENST00000453689 RBM17Q96I25 401 aaKnown RBP18.7■□□□□ 0.58
VPS16-205ENST00000453689 CRAMP1Q96RY5 1269 aa18.7■□□□□ 0.58
VPS16-205ENST00000453689 CWC25Q9NXE8 425 aaPredicted RBP18.7■□□□□ 0.58
VPS16-205ENST00000453689 PRELPP51888 382 aa18.69■□□□□ 0.58
VPS16-205ENST00000453689 NEXNQ0ZGT2 675 aa18.69■□□□□ 0.58
VPS16-205ENST00000453689 SOGA3Q5TF21 947 aa18.69■□□□□ 0.58
VPS16-205ENST00000453689 C9orf131Q5VYM1 1079 aa18.69■□□□□ 0.58
VPS16-205ENST00000453689 RNF181Q9P0P0 153 aa18.69■□□□□ 0.58
VPS16-205ENST00000453689 COL4A1P02462 1669 aa18.69■□□□□ 0.58
VPS16-205ENST00000453689 IRS4O14654 1257 aaPredicted RBP18.68■□□□□ 0.58
VPS16-205ENST00000453689 PCCAP05165 728 aaPredicted RBP18.68■□□□□ 0.58
VPS16-205ENST00000453689 CT47B1P0C2W7 299 aaPredicted RBP18.68■□□□□ 0.58
VPS16-205ENST00000453689 CWF19L2Q2TBE0 894 aaKnown RBP18.68■□□□□ 0.58
VPS16-205ENST00000453689 OLFM4Q6UX06 510 aa18.68■□□□□ 0.58
VPS16-205ENST00000453689 DNAAF4Q8WXU2 420 aa18.68■□□□□ 0.58
VPS16-205ENST00000453689 SNED1Q8TER0 1413 aa18.67■□□□□ 0.58
VPS16-205ENST00000453689 NEURL1BA8MQ27 555 aa18.67■□□□□ 0.58
VPS16-205ENST00000453689 CCDC93Q567U6 631 aa18.67■□□□□ 0.58
VPS16-205ENST00000453689 JARID2Q92833 1246 aaPredicted RBP18.67■□□□□ 0.58
VPS16-205ENST00000453689 ABCC4O15439 1325 aa18.67■□□□□ 0.58
VPS16-205ENST00000453689 LTBP3Q9NS15 1303 aa18.67■□□□□ 0.58
VPS16-205ENST00000453689 F6X3S4 739 aa18.66■□□□□ 0.58
VPS16-205ENST00000453689 LMNB1P20700 586 aa18.66■□□□□ 0.58
VPS16-205ENST00000453689 PPEF1O14829 653 aaPredicted RBP18.65■□□□□ 0.58
VPS16-205ENST00000453689 SF3B3Q15393 1217 aaKnown RBP18.65■□□□□ 0.58
VPS16-205ENST00000453689 MRPL50Q8N5N7 158 aaKnown RBP18.65■□□□□ 0.58
VPS16-205ENST00000453689 SSH1Q8WYL5 1049 aa18.65■□□□□ 0.58
VPS16-205ENST00000453689 TAOK3Q9H2K8 898 aa18.65■□□□□ 0.58
VPS16-205ENST00000453689 CDHR2Q9BYE9 1310 aa18.65■□□□□ 0.58
VPS16-205ENST00000453689 DDX46Q7L014 1031 aaKnown RBP18.64■□□□□ 0.57
VPS16-205ENST00000453689 SLC51AQ86UW1 340 aa18.64■□□□□ 0.57
VPS16-205ENST00000453689 LINS1Q8NG48 757 aa18.64■□□□□ 0.57
VPS16-205ENST00000453689 PDE8AO60658 829 aa18.63■□□□□ 0.57
VPS16-205ENST00000453689 HSP90B1P14625 803 aaKnown RBP18.63■□□□□ 0.57
VPS16-205ENST00000453689 GCKRQ14397 625 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms