RNA–Protein interactions for RNA: ENST00000453551.6

PUF60-203, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 1 (best) BASIC

Gene PUF60, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-203ENST00000453551 MAP4K1Q92918 833 aa25.49■■□□□ 1.67
PUF60-203ENST00000453551 USP16Q9Y5T5 823 aa25.49■■□□□ 1.67
PUF60-203ENST00000453551 LRSAM1Q6UWE0 723 aa25.49■■□□□ 1.67
PUF60-203ENST00000453551 DDX17Q92841 729 aaKnown RBP25.49■■□□□ 1.67
PUF60-203ENST00000453551 MED23Q9ULK4 1368 aa25.49■■□□□ 1.67
PUF60-203ENST00000453551 AFDNP55196 1824 aaKnown RBP25.48■■□□□ 1.67
PUF60-203ENST00000453551 EPHA10Q5JZY3 1008 aa25.48■■□□□ 1.67
PUF60-203ENST00000453551 TMEM63CQ9P1W3 806 aa25.48■■□□□ 1.67
PUF60-203ENST00000453551 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.48■■□□□ 1.67
PUF60-203ENST00000453551 UBR2Q8IWV8 1755 aa25.47■■□□□ 1.67
PUF60-203ENST00000453551 TRIM44Q96DX7 344 aaPredicted RBP25.47■■□□□ 1.67
PUF60-203ENST00000453551 CASTP20810 708 aaKnown RBP25.47■■□□□ 1.67
PUF60-203ENST00000453551 CABP4P57796 275 aa25.47■■□□□ 1.67
PUF60-203ENST00000453551 PLBD2Q8NHP8 589 aa25.47■■□□□ 1.67
PUF60-203ENST00000453551 CCDC8Q9H0W5 538 aaPredicted RBP25.47■■□□□ 1.67
PUF60-203ENST00000453551 CYP46A1Q9Y6A2 500 aa25.47■■□□□ 1.67
PUF60-203ENST00000453551 PAPPAQ13219 1627 aa25.46■■□□□ 1.67
PUF60-203ENST00000453551 ESPNB1AK53 854 aa25.46■■□□□ 1.67
PUF60-203ENST00000453551 ZKSCAN1P17029 563 aaPredicted RBP25.46■■□□□ 1.67
PUF60-203ENST00000453551 NMIQ13287 307 aaPredicted RBP25.46■■□□□ 1.67
PUF60-203ENST00000453551 KLHL34Q8N239 644 aa25.46■■□□□ 1.67
PUF60-203ENST00000453551 SYAP1Q96A49 352 aaPredicted RBP25.46■■□□□ 1.67
PUF60-203ENST00000453551 ALDH8A1Q9H2A2 487 aaPredicted RBP25.46■■□□□ 1.67
PUF60-203ENST00000453551 PDRG1Q9NUG6 133 aa25.46■■□□□ 1.67
PUF60-203ENST00000453551 CASP7P55210 303 aa25.45■■□□□ 1.66
PUF60-203ENST00000453551 PRPF40BQ6NWY9 871 aaKnown RBP25.45■■□□□ 1.66
PUF60-203ENST00000453551 CABLES1Q8TDN4 633 aa25.45■■□□□ 1.66
PUF60-203ENST00000453551 JAKMIP1Q96N16 626 aaKnown RBP25.45■■□□□ 1.66
PUF60-203ENST00000453551 RBM27Q9P2N5 1060 aaKnown RBP25.45■■□□□ 1.66
PUF60-203ENST00000453551 RBM8AQ9Y5S9 174 aaKnown RBP25.45■■□□□ 1.66
PUF60-203ENST00000453551 ZSCAN22P10073 491 aaPredicted RBP25.44■■□□□ 1.66
PUF60-203ENST00000453551 PDIA4P13667 645 aaKnown RBP25.44■■□□□ 1.66
PUF60-203ENST00000453551 ATP5JP18859 108 aa25.44■■□□□ 1.66
PUF60-203ENST00000453551 CHRNA2Q15822 529 aa25.44■■□□□ 1.66
PUF60-203ENST00000453551 CREB3L3Q68CJ9 461 aa25.44■■□□□ 1.66
PUF60-203ENST00000453551 TLR7Q9NYK1 1049 aaKnown RBP25.44■■□□□ 1.66
PUF60-203ENST00000453551 XIRP1Q702N8 1843 aaKnown RBP25.44■■□□□ 1.66
PUF60-203ENST00000453551 PRIM1P49642 420 aaKnown RBP25.44■■□□□ 1.66
PUF60-203ENST00000453551 PTPN12Q05209 780 aaKnown RBP25.44■■□□□ 1.66
PUF60-203ENST00000453551 FOXD4L5Q5VV16 416 aaPredicted RBP25.44■■□□□ 1.66
PUF60-203ENST00000453551 FOXD4L4Q8WXT5 416 aaPredicted RBP25.44■■□□□ 1.66
PUF60-203ENST00000453551 RBSNQ9H1K0 784 aa25.44■■□□□ 1.66
PUF60-203ENST00000453551 PSMA5P28066 241 aa25.43■■□□□ 1.66
PUF60-203ENST00000453551 TSGA10IPQ3SY00 556 aa25.43■■□□□ 1.66
PUF60-203ENST00000453551 CHAMP1Q96JM3 812 aa25.43■■□□□ 1.66
PUF60-203ENST00000453551 NSFL1CQ9UNZ2 370 aaKnown RBP25.43■■□□□ 1.66
PUF60-203ENST00000453551 SMC3Q9UQE7 1217 aa25.43■■□□□ 1.66
PUF60-203ENST00000453551 WDR17Q8IZU2 1322 aa25.43■■□□□ 1.66
PUF60-203ENST00000453551 PCDH11XQ9BZA7 1347 aa25.43■■□□□ 1.66
PUF60-203ENST00000453551 PCDH11YQ9BZA8 1340 aa25.43■■□□□ 1.66
PUF60-203ENST00000453551 HS1BP3Q53T59 392 aa25.42■■□□□ 1.66
PUF60-203ENST00000453551 TICAM2Q86XR7 235 aa25.42■■□□□ 1.66
PUF60-203ENST00000453551 FAM227BQ96M60 508 aa25.42■■□□□ 1.66
PUF60-203ENST00000453551 ERVV-2B6SEH9 535 aa25.42■■□□□ 1.66
PUF60-203ENST00000453551 STX6O43752 255 aa25.42■■□□□ 1.66
PUF60-203ENST00000453551 ADCK5Q3MIX3 580 aa25.42■■□□□ 1.66
PUF60-203ENST00000453551 TNNI3KQ59H18 835 aa25.42■■□□□ 1.66
PUF60-203ENST00000453551 NUP188Q5SRE5 1749 aa25.42■■□□□ 1.66
PUF60-203ENST00000453551 PDLIM2Q96JY6 352 aa25.42■■□□□ 1.66
PUF60-203ENST00000453551 FSD1Q9BTV5 496 aa25.42■■□□□ 1.66
PUF60-203ENST00000453551 HMG20BQ9P0W2 317 aa25.42■■□□□ 1.66
PUF60-203ENST00000453551 ATP6V1DQ9Y5K8 247 aa25.42■■□□□ 1.66
PUF60-203ENST00000453551 FPGT-TNNI3KV9GXZ4 949 aa25.42■■□□□ 1.66
PUF60-203ENST00000453551 NKX1-1Q15270 411 aaPredicted RBP25.41■■□□□ 1.66
PUF60-203ENST00000453551 RNF20Q5VTR2 975 aa25.41■■□□□ 1.66
PUF60-203ENST00000453551 SIL1Q9H173 461 aa25.41■■□□□ 1.66
PUF60-203ENST00000453551 SLC27A2O14975 620 aa25.4■■□□□ 1.66
PUF60-203ENST00000453551 SYT1P21579 422 aa25.4■■□□□ 1.66
PUF60-203ENST00000453551 BOLA2Q9H3K6 86 aa25.4■■□□□ 1.66
PUF60-203ENST00000453551 KCPQ6ZWJ8 1503 aa25.4■■□□□ 1.66
PUF60-203ENST00000453551 PHF14O94880 888 aa25.4■■□□□ 1.66
PUF60-203ENST00000453551 A0A0D9SFI3 127 aa25.39■■□□□ 1.65
PUF60-203ENST00000453551 H7C1W4 665 aa25.39■■□□□ 1.65
PUF60-203ENST00000453551 KLHDC4Q8TBB5 520 aa25.39■■□□□ 1.65
PUF60-203ENST00000453551 TNS2Q63HR2 1409 aa25.38■■□□□ 1.65
PUF60-203ENST00000453551 LARGE1O95461 756 aa25.38■■□□□ 1.65
PUF60-203ENST00000453551 F13A1P00488 732 aa25.38■■□□□ 1.65
PUF60-203ENST00000453551 ANKRD1Q15327 319 aa25.38■■□□□ 1.65
PUF60-203ENST00000453551 USPL1Q5W0Q7 1092 aa25.38■■□□□ 1.65
PUF60-203ENST00000453551 DBNLQ9UJU6 430 aaKnown RBP25.38■■□□□ 1.65
PUF60-203ENST00000453551 COL5A2P05997 1499 aaPredicted RBP25.38■■□□□ 1.65
PUF60-203ENST00000453551 BRINP3Q76B58 766 aa25.37■■□□□ 1.65
PUF60-203ENST00000453551 UBE3BQ7Z3V4 1068 aa25.37■■□□□ 1.65
PUF60-203ENST00000453551 USP48Q86UV5 1035 aa25.37■■□□□ 1.65
PUF60-203ENST00000453551 TJP1Q07157 1748 aa25.37■■□□□ 1.65
PUF60-203ENST00000453551 A0A087WZG4 1122 aa25.37■■□□□ 1.65
PUF60-203ENST00000453551 SYCE3A1L190 88 aa25.37■■□□□ 1.65
PUF60-203ENST00000453551 ZCRB1Q8TBF4 217 aaKnown RBP25.37■■□□□ 1.65
PUF60-203ENST00000453551 GPR108Q9NPR9 543 aa25.37■■□□□ 1.65
PUF60-203ENST00000453551 SOS2Q07890 1332 aaPredicted RBP25.36■■□□□ 1.65
PUF60-203ENST00000453551 CPA1P15085 419 aa25.36■■□□□ 1.65
PUF60-203ENST00000453551 NBPF26B4DH59 902 aa25.35■■□□□ 1.65
PUF60-203ENST00000453551 KCNJ4P48050 445 aa25.35■■□□□ 1.65
PUF60-203ENST00000453551 ST3GAL1Q11201 340 aa25.35■■□□□ 1.65
PUF60-203ENST00000453551 TFCP2Q12800 502 aa25.35■■□□□ 1.65
PUF60-203ENST00000453551 CSPP1Q1MSJ5 1256 aa25.35■■□□□ 1.65
PUF60-203ENST00000453551 NBPF14Q5TI25 921 aa25.35■■□□□ 1.65
PUF60-203ENST00000453551 NBPF10Q6P3W6 841 aaKnown RBP25.35■■□□□ 1.65
PUF60-203ENST00000453551 NBPF15Q8N660 670 aa25.35■■□□□ 1.65
PUF60-203ENST00000453551 ABCA3Q99758 1704 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms