RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 KIF6Q6ZMV9 814 aa18.97■□□□□ 0.63
LYSMD3-202ENST00000453259 ERBB4Q15303 1308 aa18.97■□□□□ 0.63
LYSMD3-202ENST00000453259 THSD7BQ9C0I4 1608 aa18.96■□□□□ 0.63
LYSMD3-202ENST00000453259 OLFM4Q6UX06 510 aa18.96■□□□□ 0.63
LYSMD3-202ENST00000453259 CRAMP1Q96RY5 1269 aa18.96■□□□□ 0.63
LYSMD3-202ENST00000453259 KDM3BQ7LBC6 1761 aa18.96■□□□□ 0.63
LYSMD3-202ENST00000453259 ABCC12Q96J65 1359 aa18.95■□□□□ 0.62
LYSMD3-202ENST00000453259 ECE1P42892 770 aa18.95■□□□□ 0.62
LYSMD3-202ENST00000453259 MAP1SQ66K74 1059 aaPredicted RBP18.95■□□□□ 0.62
LYSMD3-202ENST00000453259 USP50Q70EL3 339 aaPredicted RBP18.95■□□□□ 0.62
LYSMD3-202ENST00000453259 DDX21Q9NR30 783 aaKnown RBP eCLIP18.95■□□□□ 0.62
LYSMD3-202ENST00000453259 WDR33Q9C0J8 1336 aaKnown RBP18.95■□□□□ 0.62
LYSMD3-202ENST00000453259 FAM177BA6PVY3 158 aa18.94■□□□□ 0.62
LYSMD3-202ENST00000453259 CNGB1Q14028 1251 aaPredicted RBP18.94■□□□□ 0.62
LYSMD3-202ENST00000453259 RBM17Q96I25 401 aaKnown RBP18.94■□□□□ 0.62
LYSMD3-202ENST00000453259 TMX4Q9H1E5 349 aaPredicted RBP18.94■□□□□ 0.62
LYSMD3-202ENST00000453259 ABT1Q9ULW3 272 aaKnown RBP18.94■□□□□ 0.62
LYSMD3-202ENST00000453259 NUP98P52948 1817 aa18.94■□□□□ 0.62
LYSMD3-202ENST00000453259 LBX1P52954 281 aa18.93■□□□□ 0.62
LYSMD3-202ENST00000453259 DCTN1Q14203 1278 aa18.93■□□□□ 0.62
LYSMD3-202ENST00000453259 PIAS4Q8N2W9 510 aaPredicted RBP18.93■□□□□ 0.62
LYSMD3-202ENST00000453259 PARP10Q53GL7 1025 aa18.92■□□□□ 0.62
LYSMD3-202ENST00000453259 LARGE2Q8N3Y3 721 aa18.92■□□□□ 0.62
LYSMD3-202ENST00000453259 PNNQ9H307 717 aaKnown RBP18.92■□□□□ 0.62
LYSMD3-202ENST00000453259 PPEF1O14829 653 aaPredicted RBP18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 HSPA8P11142 646 aaKnown RBP18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 SCNN1DP51172 638 aa18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 PPP1R42Q7Z4L9 355 aa18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 NUTM1Q86Y26 1132 aa18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 NIM1KQ8IY84 436 aa18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 BEGAINQ9BUH8 593 aa18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 GJA3Q9Y6H8 435 aa18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 CDHR2Q9BYE9 1310 aa18.91■□□□□ 0.62
LYSMD3-202ENST00000453259 EIF4A1P60842 406 aaKnown RBP18.9■□□□□ 0.62
LYSMD3-202ENST00000453259 GIGYF2Q6Y7W6 1299 aaKnown RBP18.9■□□□□ 0.62
LYSMD3-202ENST00000453259 ZNF34Q8IZ26 560 aa18.9■□□□□ 0.62
LYSMD3-202ENST00000453259 SUPT20HQ8NEM7 779 aa18.9■□□□□ 0.62
LYSMD3-202ENST00000453259 UBN2Q6ZU65 1347 aa18.9■□□□□ 0.62
LYSMD3-202ENST00000453259 COL4A5P29400 1685 aa18.89■□□□□ 0.61
LYSMD3-202ENST00000453259 LTBP1Q14766 1721 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 CA12O43570 354 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 NTSR2O95665 410 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 MAP2K2P36507 400 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 HHIPL1Q96JK4 782 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 CAPNS2Q96L46 248 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 NLRP3Q96P20 1036 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 ADARB2Q9NS39 739 aaKnown RBP18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 RRP7AQ9Y3A4 280 aaKnown RBP18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 ATP6V0A2Q9Y487 856 aa18.88■□□□□ 0.61
LYSMD3-202ENST00000453259 NFE2L2Q16236 605 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 SLC10A5Q5PT55 438 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 SUSD4Q5VX71 490 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 TTLL7Q6ZT98 887 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 ABHD8Q96I13 439 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 TRPM7Q96QT4 1865 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 RTFDC1Q9BY42 306 aaPredicted RBP18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 MIS18AQ9NYP9 233 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 TLL2Q9Y6L7 1015 aa18.87■□□□□ 0.61
LYSMD3-202ENST00000453259 DLG5Q8TDM6 1919 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 PPIP5K2O43314 1243 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 GPTP24298 496 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 EPS15P42566 896 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 NGEFQ8N5V2 710 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 ZBTB3Q9H5J0 574 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 BABAM1Q9NWV8 329 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 GPRC5DQ9NZD1 345 aa18.86■□□□□ 0.61
LYSMD3-202ENST00000453259 MYL6BP14649 208 aa18.85■□□□□ 0.61
LYSMD3-202ENST00000453259 ZC3H15Q8WU90 426 aaKnown RBP18.85■□□□□ 0.61
LYSMD3-202ENST00000453259 GPR101Q96P66 508 aaPredicted RBP18.85■□□□□ 0.61
LYSMD3-202ENST00000453259 PLEKHF1Q96S99 279 aa18.85■□□□□ 0.61
LYSMD3-202ENST00000453259 ZNRF3Q9ULT6 936 aa18.85■□□□□ 0.61
LYSMD3-202ENST00000453259 BBOX1O75936 387 aa18.84■□□□□ 0.61
LYSMD3-202ENST00000453259 HSP90AB3PQ58FF7 597 aa18.84■□□□□ 0.61
LYSMD3-202ENST00000453259 UTP14AQ9BVJ6 771 aaKnown RBP18.84■□□□□ 0.61
LYSMD3-202ENST00000453259 MAPK8IP3Q9UPT6 1336 aa18.83■□□□□ 0.61
LYSMD3-202ENST00000453259 CST9Q5W186 159 aa18.83■□□□□ 0.6
LYSMD3-202ENST00000453259 TMC4Q7Z404 712 aa18.83■□□□□ 0.6
LYSMD3-202ENST00000453259 PGAP2Q9UHJ9 254 aa18.83■□□□□ 0.6
LYSMD3-202ENST00000453259 PAXIP1Q6ZW49 1069 aaPredicted RBP18.82■□□□□ 0.6
LYSMD3-202ENST00000453259 SP8Q8IXZ3 490 aa18.82■□□□□ 0.6
LYSMD3-202ENST00000453259 KIAA2012Q0VF49 1180 aa18.81■□□□□ 0.6
LYSMD3-202ENST00000453259 TNIP1Q15025 636 aa18.81■□□□□ 0.6
LYSMD3-202ENST00000453259 AOC3Q16853 763 aa18.81■□□□□ 0.6
LYSMD3-202ENST00000453259 LRP10Q7Z4F1 713 aa18.81■□□□□ 0.6
LYSMD3-202ENST00000453259 SAPCD2Q86UD0 394 aa18.81■□□□□ 0.6
LYSMD3-202ENST00000453259 ABCC4O15439 1325 aa18.8■□□□□ 0.6
LYSMD3-202ENST00000453259 BRPF1P55201 1214 aaPredicted RBP18.8■□□□□ 0.6
LYSMD3-202ENST00000453259 CXCL9Q07325 125 aa18.8■□□□□ 0.6
LYSMD3-202ENST00000453259 CYP4F22Q6NT55 531 aa18.8■□□□□ 0.6
LYSMD3-202ENST00000453259 DPP8Q6V1X1 898 aaPredicted RBP18.8■□□□□ 0.6
LYSMD3-202ENST00000453259 ANKRD36CQ5JPF3 1778 aa18.8■□□□□ 0.6
LYSMD3-202ENST00000453259 CIAPIN1Q6FI81 312 aa18.79■□□□□ 0.6
LYSMD3-202ENST00000453259 C3orf67Q6ZVT6 689 aa18.79■□□□□ 0.6
LYSMD3-202ENST00000453259 TSPYL4Q9UJ04 414 aa18.79■□□□□ 0.6
LYSMD3-202ENST00000453259 TRAF5O00463 557 aa18.78■□□□□ 0.6
LYSMD3-202ENST00000453259 RGS19P49795 217 aa18.78■□□□□ 0.6
LYSMD3-202ENST00000453259 GMPSP49915 693 aaPredicted RBP18.78■□□□□ 0.6
LYSMD3-202ENST00000453259 LMOD3Q0VAK6 560 aa18.78■□□□□ 0.6
LYSMD3-202ENST00000453259 PDIA6Q15084 440 aa18.78■□□□□ 0.6
LYSMD3-202ENST00000453259 MPNDQ8N594 471 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms