RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 TAF1P21675 1872 aa11.7□□□□□ -0.54
DEPDC1B-202ENST00000453022 GPTP24298 496 aa11.7□□□□□ -0.54
DEPDC1B-202ENST00000453022 GTF2E1P29083 439 aaPredicted RBP11.7□□□□□ -0.54
DEPDC1B-202ENST00000453022 SYNE4Q8N205 404 aa11.7□□□□□ -0.54
DEPDC1B-202ENST00000453022 TRPM7Q96QT4 1865 aa11.7□□□□□ -0.54
DEPDC1B-202ENST00000453022 NYXQ9GZU5 481 aa11.7□□□□□ -0.54
DEPDC1B-202ENST00000453022 ZBTB3Q9H5J0 574 aa11.7□□□□□ -0.54
DEPDC1B-202ENST00000453022 RRP7AQ9Y3A4 280 aaKnown RBP11.7□□□□□ -0.54
DEPDC1B-202ENST00000453022 RNF123Q5XPI4 1314 aa11.69□□□□□ -0.54
DEPDC1B-202ENST00000453022 CAPN15O75808 1086 aa11.69□□□□□ -0.54
DEPDC1B-202ENST00000453022 ITGBL1O95965 494 aaPredicted RBP11.69□□□□□ -0.54
DEPDC1B-202ENST00000453022 NEFMP07197 916 aa11.69□□□□□ -0.54
DEPDC1B-202ENST00000453022 KIF6Q6ZMV9 814 aa11.69□□□□□ -0.54
DEPDC1B-202ENST00000453022 PSMD1Q99460 953 aa11.69□□□□□ -0.54
DEPDC1B-202ENST00000453022 HACL1Q9UJ83 578 aa11.69□□□□□ -0.54
DEPDC1B-202ENST00000453022 NTSR2O95665 410 aa11.68□□□□□ -0.54
DEPDC1B-202ENST00000453022 HOXA10P31260 410 aaPredicted RBP11.68□□□□□ -0.54
DEPDC1B-202ENST00000453022 EAPPQ56P03 285 aaPredicted RBP11.68□□□□□ -0.54
DEPDC1B-202ENST00000453022 SUSD4Q5VX71 490 aa11.68□□□□□ -0.54
DEPDC1B-202ENST00000453022 C3orf67Q6ZVT6 689 aa11.68□□□□□ -0.54
DEPDC1B-202ENST00000453022 LRP10Q7Z4F1 713 aa11.68□□□□□ -0.54
DEPDC1B-202ENST00000453022 ZNF34Q8IZ26 560 aa11.68□□□□□ -0.54
DEPDC1B-202ENST00000453022 THSD7BQ9C0I4 1608 aa11.68□□□□□ -0.54
DEPDC1B-202ENST00000453022 DDX60Q8IY21 1712 aaKnown RBP11.68□□□□□ -0.54
DEPDC1B-202ENST00000453022 EPHX2P34913 555 aa11.67□□□□□ -0.54
DEPDC1B-202ENST00000453022 GPC2Q8N158 579 aa11.67□□□□□ -0.54
DEPDC1B-202ENST00000453022 ERBB4Q15303 1308 aa11.67□□□□□ -0.54
DEPDC1B-202ENST00000453022 MAPK8IP3Q9UPT6 1336 aa11.67□□□□□ -0.54
DEPDC1B-202ENST00000453022 PDIA6Q15084 440 aa11.67□□□□□ -0.54
DEPDC1B-202ENST00000453022 GIGYF2Q6Y7W6 1299 aaKnown RBP11.67□□□□□ -0.54
DEPDC1B-202ENST00000453022 RPGRQ92834 1020 aaKnown RBP11.67□□□□□ -0.54
DEPDC1B-202ENST00000453022 LRRC37AA6NMS7 1700 aa11.66□□□□□ -0.54
DEPDC1B-202ENST00000453022 TMEM88BA6NKF7 163 aa11.66□□□□□ -0.54
DEPDC1B-202ENST00000453022 FOXN1O15353 648 aa11.66□□□□□ -0.54
DEPDC1B-202ENST00000453022 VEGFBP49765 207 aa11.66□□□□□ -0.54
DEPDC1B-202ENST00000453022 PROSER3Q2NL68 480 aa11.66□□□□□ -0.54
DEPDC1B-202ENST00000453022 MAP1SQ66K74 1059 aaPredicted RBP11.66□□□□□ -0.54
DEPDC1B-202ENST00000453022 CC2D2BQ6DHV5 1058 aa11.66□□□□□ -0.54
DEPDC1B-202ENST00000453022 TSPYL4Q9UJ04 414 aa11.66□□□□□ -0.54
DEPDC1B-202ENST00000453022 PPEF1O14829 653 aaPredicted RBP11.65□□□□□ -0.54
DEPDC1B-202ENST00000453022 PNMA8AQ86V59 439 aaPredicted RBP11.65□□□□□ -0.54
DEPDC1B-202ENST00000453022 JDP2Q8WYK2 163 aa11.65□□□□□ -0.54
DEPDC1B-202ENST00000453022 CRAMP1Q96RY5 1269 aa11.65□□□□□ -0.54
DEPDC1B-202ENST00000453022 CLEC11AQ9Y240 323 aa11.65□□□□□ -0.54
DEPDC1B-202ENST00000453022 ZBTB22O15209 634 aa11.64□□□□□ -0.55
DEPDC1B-202ENST00000453022 ANXA1P04083 346 aa11.64□□□□□ -0.55
DEPDC1B-202ENST00000453022 SCNN1DP51172 638 aa11.64□□□□□ -0.55
DEPDC1B-202ENST00000453022 CNTROBQ8N137 903 aa11.64□□□□□ -0.55
DEPDC1B-202ENST00000453022 RBM17Q96I25 401 aaKnown RBP11.64□□□□□ -0.55
DEPDC1B-202ENST00000453022 GJA3Q9Y6H8 435 aa11.64□□□□□ -0.55
DEPDC1B-202ENST00000453022 DUOX1Q9NRD9 1551 aa11.64□□□□□ -0.55
DEPDC1B-202ENST00000453022 TCERG1O14776 1098 aaKnown RBP11.63□□□□□ -0.55
DEPDC1B-202ENST00000453022 PNNQ9H307 717 aaKnown RBP11.63□□□□□ -0.55
DEPDC1B-202ENST00000453022 RASSF10A6NK89 507 aa11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 EIF2S2P20042 333 aaKnown RBP11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 EIF6P56537 245 aaKnown RBP11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 RIPK4P57078 832 aa11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 GRIPAP1Q4V328 841 aa11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 PARP10Q53GL7 1025 aa11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 PPP1R42Q7Z4L9 355 aa11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 LARGE2Q8N3Y3 721 aa11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 ABCC4O15439 1325 aa11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 COL4A1P02462 1669 aa11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 TMPOP42166 694 aaKnown RBP11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 EPS15P42566 896 aa11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 CACNB1Q02641 598 aaPredicted RBP11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 FMR1Q06787 632 aaKnown RBP eCLIP11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 SLC10A5Q5PT55 438 aa11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 RNF39Q9H2S5 420 aa11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 ATP6V0A2Q9Y487 856 aa11.62□□□□□ -0.55
DEPDC1B-202ENST00000453022 AOC3Q16853 763 aa11.61□□□□□ -0.55
DEPDC1B-202ENST00000453022 NECTIN2Q92692 538 aa11.61□□□□□ -0.55
DEPDC1B-202ENST00000453022 NLRP3Q96P20 1036 aa11.61□□□□□ -0.55
DEPDC1B-202ENST00000453022 UTP14AQ9BVJ6 771 aaKnown RBP11.61□□□□□ -0.55
DEPDC1B-202ENST00000453022 DDX21Q9NR30 783 aaKnown RBP eCLIP11.61□□□□□ -0.55
DEPDC1B-202ENST00000453022 BABAM1Q9NWV8 329 aa11.61□□□□□ -0.55
DEPDC1B-202ENST00000453022 PPIP5K2O43314 1243 aa11.6□□□□□ -0.55
DEPDC1B-202ENST00000453022 LMOD1P29536 600 aaPredicted RBP11.6□□□□□ -0.55
DEPDC1B-202ENST00000453022 KRT24Q2M2I5 525 aa11.6□□□□□ -0.55
DEPDC1B-202ENST00000453022 NLRP10Q86W26 655 aa11.6□□□□□ -0.55
DEPDC1B-202ENST00000453022 NIM1KQ8IY84 436 aa11.6□□□□□ -0.55
DEPDC1B-202ENST00000453022 XAGE3Q8WTP9 111 aa11.6□□□□□ -0.55
DEPDC1B-202ENST00000453022 PRDM10Q9NQV6 1147 aa11.6□□□□□ -0.55
DEPDC1B-202ENST00000453022 WBP1LQ9NX94 342 aa11.6□□□□□ -0.55
DEPDC1B-202ENST00000453022 HCLS1P14317 486 aaPredicted RBP11.59□□□□□ -0.55
DEPDC1B-202ENST00000453022 CTCFP49711 727 aaPredicted RBP11.59□□□□□ -0.55
DEPDC1B-202ENST00000453022 RALBP1Q15311 655 aa11.59□□□□□ -0.55
DEPDC1B-202ENST00000453022 DEFB115Q30KQ5 88 aa11.59□□□□□ -0.55
DEPDC1B-202ENST00000453022 COPS6Q7L5N1 327 aa11.59□□□□□ -0.55
DEPDC1B-202ENST00000453022 RTFDC1Q9BY42 306 aaPredicted RBP11.59□□□□□ -0.55
DEPDC1B-202ENST00000453022 WDR33Q9C0J8 1336 aaKnown RBP11.59□□□□□ -0.55
DEPDC1B-202ENST00000453022 TRAF5O00463 557 aa11.58□□□□□ -0.55
DEPDC1B-202ENST00000453022 CXCL9Q07325 125 aa11.58□□□□□ -0.55
DEPDC1B-202ENST00000453022 LMOD3Q0VAK6 560 aa11.58□□□□□ -0.55
DEPDC1B-202ENST00000453022 AIMP1Q12904 312 aaKnown RBP11.58□□□□□ -0.55
DEPDC1B-202ENST00000453022 USP50Q70EL3 339 aaPredicted RBP11.58□□□□□ -0.55
DEPDC1B-202ENST00000453022 CCDC146Q8IYE0 955 aa11.58□□□□□ -0.55
DEPDC1B-202ENST00000453022 AIDAQ96BJ3 306 aa11.58□□□□□ -0.55
DEPDC1B-202ENST00000453022 GPRC5DQ9NZD1 345 aa11.58□□□□□ -0.55
DEPDC1B-202ENST00000453022 ABT1Q9ULW3 272 aaKnown RBP11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms