RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 STRN4Q9NRL3 753 aa7.5□□□□□ -1.21
LINC00393-202ENST00000452852 SLAIN2Q9P270 581 aa7.5□□□□□ -1.21
LINC00393-202ENST00000452852 CEP63Q96MT8 703 aa7.49□□□□□ -1.21
LINC00393-202ENST00000452852 QTRT2Q9H974 415 aaKnown RBP7.49□□□□□ -1.21
LINC00393-202ENST00000452852 MARK1Q9P0L2 795 aa7.49□□□□□ -1.21
LINC00393-202ENST00000452852 ZCCHC6Q5VYS8 1495 aaKnown RBP7.49□□□□□ -1.21
LINC00393-202ENST00000452852 FAM182BQ5T319 152 aa7.48□□□□□ -1.21
LINC00393-202ENST00000452852 OXCT2Q9BYC2 517 aaPredicted RBP7.48□□□□□ -1.21
LINC00393-202ENST00000452852 BICRAQ9NZM4 1560 aa7.48□□□□□ -1.21
LINC00393-202ENST00000452852 KLK14Q9P0G3 267 aa7.48□□□□□ -1.21
LINC00393-202ENST00000452852 CXXC1Q9P0U4 656 aaPredicted RBP7.48□□□□□ -1.21
LINC00393-202ENST00000452852 BCRP11274 1271 aa7.47□□□□□ -1.21
LINC00393-202ENST00000452852 SFSWAPQ12872 951 aaKnown RBP7.47□□□□□ -1.21
LINC00393-202ENST00000452852 LAMC2Q13753 1193 aa7.47□□□□□ -1.21
LINC00393-202ENST00000452852 GRIN2CQ14957 1233 aa7.47□□□□□ -1.21
LINC00393-202ENST00000452852 HIF1AQ16665 826 aa7.47□□□□□ -1.21
LINC00393-202ENST00000452852 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.47□□□□□ -1.21
LINC00393-202ENST00000452852 BCS1LQ9Y276 419 aa7.47□□□□□ -1.21
LINC00393-202ENST00000452852 DCAF1Q9Y4B6 1507 aa7.47□□□□□ -1.21
LINC00393-202ENST00000452852 BAG6P46379 1132 aa7.46□□□□□ -1.22
LINC00393-202ENST00000452852 TYRO3Q06418 890 aa7.46□□□□□ -1.22
LINC00393-202ENST00000452852 DGKZQ13574 1117 aa7.46□□□□□ -1.22
LINC00393-202ENST00000452852 CAPN12Q6ZSI9 719 aa7.46□□□□□ -1.22
LINC00393-202ENST00000452852 BTLAQ7Z6A9 289 aa7.46□□□□□ -1.22
LINC00393-202ENST00000452852 MYO19Q96H55 970 aa7.46□□□□□ -1.22
LINC00393-202ENST00000452852 MKNK1Q9BUB5 465 aa7.46□□□□□ -1.22
LINC00393-202ENST00000452852 TRAIPQ9BWF2 469 aa7.46□□□□□ -1.22
LINC00393-202ENST00000452852 BRD7Q9NPI1 651 aa7.46□□□□□ -1.22
LINC00393-202ENST00000452852 LRFN2Q9ULH4 789 aa7.46□□□□□ -1.22
LINC00393-202ENST00000452852 CCDC9Q9Y3X0 531 aaKnown RBP7.46□□□□□ -1.22
LINC00393-202ENST00000452852 TMEM88BA6NKF7 163 aa7.45□□□□□ -1.22
LINC00393-202ENST00000452852 TGFBR3LH3BV60 316 aa7.45□□□□□ -1.22
LINC00393-202ENST00000452852 ATP2B4P23634 1241 aa7.45□□□□□ -1.22
LINC00393-202ENST00000452852 C1orf229Q6ZS94 237 aaPredicted RBP7.45□□□□□ -1.22
LINC00393-202ENST00000452852 AEBP1Q8IUX7 1158 aa7.45□□□□□ -1.22
LINC00393-202ENST00000452852 GGA1Q9UJY5 639 aa7.45□□□□□ -1.22
LINC00393-202ENST00000452852 PRR12Q9ULL5 1215 aa7.45□□□□□ -1.22
LINC00393-202ENST00000452852 CNTNAP5Q8WYK1 1306 aa7.45□□□□□ -1.22
LINC00393-202ENST00000452852 CARNS1A5YM72 827 aa7.44□□□□□ -1.22
LINC00393-202ENST00000452852 OIP5O43482 229 aa7.44□□□□□ -1.22
LINC00393-202ENST00000452852 ITGB2P05107 769 aa7.44□□□□□ -1.22
LINC00393-202ENST00000452852 FURINP09958 794 aa7.44□□□□□ -1.22
LINC00393-202ENST00000452852 ARAFP10398 606 aa7.44□□□□□ -1.22
LINC00393-202ENST00000452852 C11orf91Q3C1V1 193 aa7.44□□□□□ -1.22
LINC00393-202ENST00000452852 COX20Q5RI15 118 aa7.44□□□□□ -1.22
LINC00393-202ENST00000452852 GOLGA6L1Q8N7Z2 621 aa7.44□□□□□ -1.22
LINC00393-202ENST00000452852 SAP130Q9H0E3 1048 aa7.44□□□□□ -1.22
LINC00393-202ENST00000452852 DMGDHQ9UI17 866 aaKnown RBP7.44□□□□□ -1.22
LINC00393-202ENST00000452852 KLF15Q9UIH9 416 aa7.44□□□□□ -1.22
LINC00393-202ENST00000452852 GDF2Q9UK05 429 aaPredicted RBP7.44□□□□□ -1.22
LINC00393-202ENST00000452852 KCNH4Q9UQ05 1017 aa7.44□□□□□ -1.22
LINC00393-202ENST00000452852 SCRIBQ14160 1630 aa7.43□□□□□ -1.22
LINC00393-202ENST00000452852 NEURL1BA8MQ27 555 aa7.43□□□□□ -1.22
LINC00393-202ENST00000452852 KCNQ4P56696 695 aa7.43□□□□□ -1.22
LINC00393-202ENST00000452852 PCBP4P57723 403 aaKnown RBP7.43□□□□□ -1.22
LINC00393-202ENST00000452852 NAA30Q147X3 362 aaPredicted RBP7.43□□□□□ -1.22
LINC00393-202ENST00000452852 IER5Q5VY09 327 aa7.43□□□□□ -1.22
LINC00393-202ENST00000452852 RETREG2Q8NC44 543 aa7.43□□□□□ -1.22
LINC00393-202ENST00000452852 COL26A1Q96A83 441 aa7.43□□□□□ -1.22
LINC00393-202ENST00000452852 SLC30A3Q99726 388 aa7.43□□□□□ -1.22
LINC00393-202ENST00000452852 LRRC4BQ9NT99 713 aa7.43□□□□□ -1.22
LINC00393-202ENST00000452852 PTCD1O75127 700 aaKnown RBP7.42□□□□□ -1.22
LINC00393-202ENST00000452852 ZNF468Q5VIY5 522 aaPredicted RBP7.42□□□□□ -1.22
LINC00393-202ENST00000452852 C16orf46Q6P387 395 aa7.42□□□□□ -1.22
LINC00393-202ENST00000452852 SLCO4C1Q6ZQN7 724 aa7.42□□□□□ -1.22
LINC00393-202ENST00000452852 NEDD1Q8NHV4 660 aa7.42□□□□□ -1.22
LINC00393-202ENST00000452852 EDARADDQ8WWZ3 215 aa7.42□□□□□ -1.22
LINC00393-202ENST00000452852 IFT43Q96FT9 208 aa7.42□□□□□ -1.22
LINC00393-202ENST00000452852 AVENQ9NQS1 362 aaPredicted RBP7.42□□□□□ -1.22
LINC00393-202ENST00000452852 SHROOM4Q9ULL8 1493 aa7.42□□□□□ -1.22
LINC00393-202ENST00000452852 SHISA8B8ZZ34 492 aa7.41□□□□□ -1.22
LINC00393-202ENST00000452852 MICAL2O94851 1124 aa7.41□□□□□ -1.22
LINC00393-202ENST00000452852 ADH6P28332 368 aa7.41□□□□□ -1.22
LINC00393-202ENST00000452852 IDH3AP50213 366 aa7.41□□□□□ -1.22
LINC00393-202ENST00000452852 SPEM2Q0P670 501 aa7.41□□□□□ -1.22
LINC00393-202ENST00000452852 SYT9Q86SS6 491 aa7.41□□□□□ -1.22
LINC00393-202ENST00000452852 EPXP11678 715 aa7.4□□□□□ -1.22
LINC00393-202ENST00000452852 INPP5BP32019 993 aa7.4□□□□□ -1.22
LINC00393-202ENST00000452852 SCNN1AP37088 669 aa7.4□□□□□ -1.22
LINC00393-202ENST00000452852 RAB44Q7Z6P3 723 aaPredicted RBP7.4□□□□□ -1.22
LINC00393-202ENST00000452852 FCHSD1Q86WN1 690 aa7.4□□□□□ -1.22
LINC00393-202ENST00000452852 SEPT3Q9UH03 358 aa7.4□□□□□ -1.22
LINC00393-202ENST00000452852 SSFA2P28290 1259 aa7.39□□□□□ -1.23
LINC00393-202ENST00000452852 GRNP28799 593 aaKnown RBP7.39□□□□□ -1.23
LINC00393-202ENST00000452852 TREML1Q86YW5 311 aa7.39□□□□□ -1.23
LINC00393-202ENST00000452852 KRTAP4-12Q9BQ66 201 aa7.39□□□□□ -1.23
LINC00393-202ENST00000452852 TNFRSF10BO14763 440 aa7.38□□□□□ -1.23
LINC00393-202ENST00000452852 OPLAHO14841 1288 aa7.38□□□□□ -1.23
LINC00393-202ENST00000452852 ARSDP51689 593 aa7.38□□□□□ -1.23
LINC00393-202ENST00000452852 FAM26DQ5JW98 314 aa7.38□□□□□ -1.23
LINC00393-202ENST00000452852 ETFBKMTQ8IXQ9 262 aa7.38□□□□□ -1.23
LINC00393-202ENST00000452852 SIN3BO75182 1162 aa7.37□□□□□ -1.23
LINC00393-202ENST00000452852 EPB42P16452 691 aa7.37□□□□□ -1.23
LINC00393-202ENST00000452852 BRD2P25440 801 aaKnown RBP7.37□□□□□ -1.23
LINC00393-202ENST00000452852 BHMTQ93088 406 aa7.37□□□□□ -1.23
LINC00393-202ENST00000452852 BTBD6Q96KE9 485 aa7.37□□□□□ -1.23
LINC00393-202ENST00000452852 GSX2Q9BZM3 304 aa7.37□□□□□ -1.23
LINC00393-202ENST00000452852 USP20Q9Y2K6 914 aa7.37□□□□□ -1.23
LINC00393-202ENST00000452852 AMPD1P23109 780 aa7.36□□□□□ -1.23
LINC00393-202ENST00000452852 NEUROD1Q13562 356 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms