RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 FANCGO15287 622 aa21.85■■□□□ 1.09
PTPA-223ENST00000452489 HOMER1Q86YM7 354 aa21.85■■□□□ 1.09
PTPA-223ENST00000452489 TUBGCP6Q96RT7 1819 aa21.85■■□□□ 1.09
PTPA-223ENST00000452489 IFIT2P09913 472 aaKnown RBP21.84■■□□□ 1.09
PTPA-223ENST00000452489 EVCP57679 992 aa21.84■■□□□ 1.09
PTPA-223ENST00000452489 CCDC158Q5M9N0 1113 aa21.84■■□□□ 1.09
PTPA-223ENST00000452489 BICD2Q8TD16 824 aa21.84■■□□□ 1.09
PTPA-223ENST00000452489 MAP4K4O95819 1239 aaPredicted RBP21.84■■□□□ 1.09
PTPA-223ENST00000452489 STAG3Q9UJ98 1225 aa21.84■■□□□ 1.09
PTPA-223ENST00000452489 A0A1W2PP64 1363 aa21.84■■□□□ 1.09
PTPA-223ENST00000452489 LARP1BQ659C4 914 aaKnown RBP21.83■■□□□ 1.09
PTPA-223ENST00000452489 FUT8Q9BYC5 575 aa21.83■■□□□ 1.09
PTPA-223ENST00000452489 NPHP3Q7Z494 1330 aa21.83■■□□□ 1.09
PTPA-223ENST00000452489 URI1O94763 535 aaPredicted RBP21.83■■□□□ 1.09
PTPA-223ENST00000452489 IVLP07476 585 aa21.83■■□□□ 1.09
PTPA-223ENST00000452489 NBPF11Q86T75 865 aa21.83■■□□□ 1.09
PTPA-223ENST00000452489 PGBD1Q96JS3 809 aa21.83■■□□□ 1.09
PTPA-223ENST00000452489 PDRG1Q9NUG6 133 aa21.83■■□□□ 1.09
PTPA-223ENST00000452489 BECN2A8MW95 431 aa21.82■■□□□ 1.08
PTPA-223ENST00000452489 LEO1Q8WVC0 666 aaPredicted RBP21.82■■□□□ 1.08
PTPA-223ENST00000452489 GLI2P10070 1586 aa21.82■■□□□ 1.08
PTPA-223ENST00000452489 FAM83GA6ND36 823 aa21.82■■□□□ 1.08
PTPA-223ENST00000452489 EFCAB8A8MWE9 144 aa21.82■■□□□ 1.08
PTPA-223ENST00000452489 FBLN1P23142 703 aa21.82■■□□□ 1.08
PTPA-223ENST00000452489 LRRCC1Q9C099 1032 aa21.82■■□□□ 1.08
PTPA-223ENST00000452489 FYB1O15117 783 aa21.81■■□□□ 1.08
PTPA-223ENST00000452489 ETF1P62495 437 aaKnown RBP21.81■■□□□ 1.08
PTPA-223ENST00000452489 ARMCX5Q6P1M9 558 aa21.81■■□□□ 1.08
PTPA-223ENST00000452489 PPM1EQ8WY54 764 aa21.81■■□□□ 1.08
PTPA-223ENST00000452489 PRAM1Q96QH2 718 aa21.81■■□□□ 1.08
PTPA-223ENST00000452489 CCDC91Q7Z6B0 441 aa21.81■■□□□ 1.08
PTPA-223ENST00000452489 DHX40Q8IX18 779 aaKnown RBP21.81■■□□□ 1.08
PTPA-223ENST00000452489 DDX54Q8TDD1 881 aaKnown RBP21.81■■□□□ 1.08
PTPA-223ENST00000452489 JPH4Q96JJ6 628 aa21.81■■□□□ 1.08
PTPA-223ENST00000452489 YTHDC2Q9H6S0 1430 aaKnown RBP21.81■■□□□ 1.08
PTPA-223ENST00000452489 VWDEQ8N2E2 1590 aa21.81■■□□□ 1.08
PTPA-223ENST00000452489 PSDA5PKW4 1024 aaPredicted RBP21.8■■□□□ 1.08
PTPA-223ENST00000452489 GSDMDP57764 484 aa21.8■■□□□ 1.08
PTPA-223ENST00000452489 DCTN1Q14203 1278 aa21.8■■□□□ 1.08
PTPA-223ENST00000452489 CARD10Q9BWT7 1032 aa21.8■■□□□ 1.08
PTPA-223ENST00000452489 ARFGAP3Q9NP61 516 aa21.8■■□□□ 1.08
PTPA-223ENST00000452489 VPS18Q9P253 973 aa21.8■■□□□ 1.08
PTPA-223ENST00000452489 ME3Q16798 604 aa21.8■■□□□ 1.08
PTPA-223ENST00000452489 EVC2Q86UK5 1308 aa21.8■■□□□ 1.08
PTPA-223ENST00000452489 CAVIN2O95810 425 aa21.79■■□□□ 1.08
PTPA-223ENST00000452489 DNAJC21Q5F1R6 531 aaKnown RBP21.79■■□□□ 1.08
PTPA-223ENST00000452489 SCAND2PQ9GZW5 306 aaPredicted RBP21.79■■□□□ 1.08
PTPA-223ENST00000452489 ZSCAN16Q9H4T2 348 aaPredicted RBP21.79■■□□□ 1.08
PTPA-223ENST00000452489 DONSONQ9NYP3 566 aa21.79■■□□□ 1.08
PTPA-223ENST00000452489 GSCP56915 257 aaPredicted RBP21.79■■□□□ 1.08
PTPA-223ENST00000452489 GNL2Q13823 731 aaKnown RBP21.79■■□□□ 1.08
PTPA-223ENST00000452489 MCTP2Q6DN12 878 aa21.79■■□□□ 1.08
PTPA-223ENST00000452489 SUGP1Q8IWZ8 645 aaKnown RBP21.79■■□□□ 1.08
PTPA-223ENST00000452489 FBXW7Q969H0 707 aa21.79■■□□□ 1.08
PTPA-223ENST00000452489 LSG1Q9H089 658 aaKnown RBP21.79■■□□□ 1.08
PTPA-223ENST00000452489 OSBPL5Q9H0X9 879 aaPredicted RBP21.79■■□□□ 1.08
PTPA-223ENST00000452489 PNPLA6Q8IY17 1366 aa21.79■■□□□ 1.08
PTPA-223ENST00000452489 CORO7P57737 925 aa21.78■■□□□ 1.08
PTPA-223ENST00000452489 PHLPP2Q6ZVD8 1323 aa21.78■■□□□ 1.08
PTPA-223ENST00000452489 ADCK5Q3MIX3 580 aa21.78■■□□□ 1.08
PTPA-223ENST00000452489 TULP4Q9NRJ4 1543 aa21.78■■□□□ 1.08
PTPA-223ENST00000452489 SAFB2Q14151 953 aaKnown RBP eCLIP21.77■■□□□ 1.08
PTPA-223ENST00000452489 STX1AQ16623 288 aa21.77■■□□□ 1.08
PTPA-223ENST00000452489 SUFUQ9UMX1 484 aa21.77■■□□□ 1.08
PTPA-223ENST00000452489 SPG7Q9UQ90 795 aa21.77■■□□□ 1.08
PTPA-223ENST00000452489 PARP3Q9Y6F1 533 aa21.77■■□□□ 1.08
PTPA-223ENST00000452489 SGSM2O43147 1006 aa21.77■■□□□ 1.08
PTPA-223ENST00000452489 TPM1P09493 284 aa21.77■■□□□ 1.08
PTPA-223ENST00000452489 LRRFIP1Q32MZ4 808 aaKnown RBP21.77■■□□□ 1.08
PTPA-223ENST00000452489 NBPF6Q5VWK0 638 aa21.77■■□□□ 1.08
PTPA-223ENST00000452489 TRIM65Q6PJ69 517 aa21.77■■□□□ 1.08
PTPA-223ENST00000452489 NBPF4Q96M43 638 aa21.77■■□□□ 1.08
PTPA-223ENST00000452489 PARD6BQ9BYG5 372 aa21.77■■□□□ 1.08
PTPA-223ENST00000452489 PLEKHA4Q9H4M7 779 aa21.77■■□□□ 1.08
PTPA-223ENST00000452489 SMC2O95347 1197 aa21.76■■□□□ 1.07
PTPA-223ENST00000452489 SWT1Q5T5J6 900 aaKnown RBP21.76■■□□□ 1.07
PTPA-223ENST00000452489 SLC4A10Q6U841 1118 aa21.76■■□□□ 1.07
PTPA-223ENST00000452489 AOPEPQ8N6M6 819 aa21.76■■□□□ 1.07
PTPA-223ENST00000452489 NRXN1Q9ULB1 1477 aa21.76■■□□□ 1.07
PTPA-223ENST00000452489 TMC6Q7Z403 805 aa21.76■■□□□ 1.07
PTPA-223ENST00000452489 JAKMIP1Q96N16 626 aaKnown RBP21.76■■□□□ 1.07
PTPA-223ENST00000452489 MMS22LQ6ZRQ5 1243 aa21.75■■□□□ 1.07
PTPA-223ENST00000452489 SRRTQ9BXP5 876 aaKnown RBP21.75■■□□□ 1.07
PTPA-223ENST00000452489 STAP2Q9UGK3 403 aa21.75■■□□□ 1.07
PTPA-223ENST00000452489 EPB41L2O43491 1005 aaKnown RBP21.75■■□□□ 1.07
PTPA-223ENST00000452489 SFPQP23246 707 aaKnown RBP eCLIP21.75■■□□□ 1.07
PTPA-223ENST00000452489 LONRF2Q1L5Z9 754 aa21.75■■□□□ 1.07
PTPA-223ENST00000452489 GPR161Q8N6U8 529 aaKnown RBP21.75■■□□□ 1.07
PTPA-223ENST00000452489 FAM212AQ96EL1 285 aa21.75■■□□□ 1.07
PTPA-223ENST00000452489 PDE11AQ9HCR9 933 aa21.75■■□□□ 1.07
PTPA-223ENST00000452489 ERCC4Q92889 916 aaPredicted RBP21.74■■□□□ 1.07
PTPA-223ENST00000452489 SH2B1Q9NRF2 756 aaPredicted RBP21.74■■□□□ 1.07
PTPA-223ENST00000452489 CDK12Q9NYV4 1490 aaPredicted RBP21.74■■□□□ 1.07
PTPA-223ENST00000452489 SETBP1Q9Y6X0 1596 aa21.74■■□□□ 1.07
PTPA-223ENST00000452489 F6X3S4 739 aa21.74■■□□□ 1.07
PTPA-223ENST00000452489 CHGAP10645 457 aaKnown RBP21.74■■□□□ 1.07
PTPA-223ENST00000452489 NEURL4Q96JN8 1562 aa21.73■■□□□ 1.07
PTPA-223ENST00000452489 PNMA6EA0A0J9YXQ4 647 aa21.73■■□□□ 1.07
PTPA-223ENST00000452489 N4BP1O75113 896 aaKnown RBP21.73■■□□□ 1.07
PTPA-223ENST00000452489 CWC27Q6UX04 472 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms