RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 ZPR1O75312 459 aa13.27□□□□□ -0.29
PKP4-206ENST00000452162 GNAI2P04899 355 aa13.27□□□□□ -0.29
PKP4-206ENST00000452162 PROSER3Q2NL68 480 aa13.27□□□□□ -0.29
PKP4-206ENST00000452162 HMMRO75330 724 aa13.27□□□□□ -0.29
PKP4-206ENST00000452162 A0A087WZG4 1122 aa13.26□□□□□ -0.29
PKP4-206ENST00000452162 GNAI3P08754 354 aa13.26□□□□□ -0.29
PKP4-206ENST00000452162 GSPT1P15170 499 aaKnown RBP13.26□□□□□ -0.29
PKP4-206ENST00000452162 PHAXQ9H814 394 aaKnown RBP13.26□□□□□ -0.29
PKP4-206ENST00000452162 BCL2L12Q9HB09 334 aa13.26□□□□□ -0.29
PKP4-206ENST00000452162 RTL5Q5HYW3 569 aaPredicted RBP13.25□□□□□ -0.29
PKP4-206ENST00000452162 LRP10Q7Z4F1 713 aa13.25□□□□□ -0.29
PKP4-206ENST00000452162 DZIP3Q86Y13 1208 aaKnown RBP13.25□□□□□ -0.29
PKP4-206ENST00000452162 CHMP4AQ9BY43 222 aa13.25□□□□□ -0.29
PKP4-206ENST00000452162 CHPF2Q9P2E5 772 aa13.25□□□□□ -0.29
PKP4-206ENST00000452162 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
PKP4-206ENST00000452162 SCN7AQ01118 1682 aa13.25□□□□□ -0.29
PKP4-206ENST00000452162 ERBB4Q15303 1308 aa13.25□□□□□ -0.29
PKP4-206ENST00000452162 RBM25P49756 843 aaKnown RBP13.25□□□□□ -0.29
PKP4-206ENST00000452162 CAMTA2O94983 1202 aa13.24□□□□□ -0.29
PKP4-206ENST00000452162 POLD1P28340 1107 aa13.24□□□□□ -0.29
PKP4-206ENST00000452162 TTC22Q5TAA0 569 aa13.24□□□□□ -0.29
PKP4-206ENST00000452162 TBC1D9Q6ZT07 1266 aa13.24□□□□□ -0.29
PKP4-206ENST00000452162 TTLL7Q6ZT98 887 aa13.24□□□□□ -0.29
PKP4-206ENST00000452162 C16orf71Q8IYS4 520 aaPredicted RBP13.24□□□□□ -0.29
PKP4-206ENST00000452162 NLGN1Q8N2Q7 840 aa13.24□□□□□ -0.29
PKP4-206ENST00000452162 TBC1D2Q9BYX2 928 aa13.24□□□□□ -0.29
PKP4-206ENST00000452162 GOLGB1Q14789 3259 aaKnown RBP13.24□□□□□ -0.29
PKP4-206ENST00000452162 OTUD7AQ8TE49 926 aaPredicted RBP13.24□□□□□ -0.29
PKP4-206ENST00000452162 DDX21Q9NR30 783 aaKnown RBP eCLIP13.24□□□□□ -0.29
PKP4-206ENST00000452162 PPP1R1BQ9UD71 204 aaPredicted RBP13.24□□□□□ -0.29
PKP4-206ENST00000452162 NUP98P52948 1817 aa13.24□□□□□ -0.29
PKP4-206ENST00000452162 SMARCA5O60264 1052 aaPredicted RBP13.23□□□□□ -0.29
PKP4-206ENST00000452162 MMP10P09238 476 aa13.23□□□□□ -0.29
PKP4-206ENST00000452162 USP44Q9H0E7 712 aa13.23□□□□□ -0.29
PKP4-206ENST00000452162 CDC45O75419 566 aa13.23□□□□□ -0.29
PKP4-206ENST00000452162 ATP8B2P98198 1209 aa13.23□□□□□ -0.29
PKP4-206ENST00000452162 DBF4Q9UBU7 674 aaPredicted RBP13.22□□□□□ -0.29
PKP4-206ENST00000452162 AIMP1Q12904 312 aaKnown RBP13.22□□□□□ -0.29
PKP4-206ENST00000452162 HLFQ16534 295 aa13.22□□□□□ -0.29
PKP4-206ENST00000452162 LRRFIP2Q9Y608 721 aaKnown RBP13.22□□□□□ -0.29
PKP4-206ENST00000452162 AFDNP55196 1824 aaKnown RBP13.22□□□□□ -0.29
PKP4-206ENST00000452162 PNMA6EA0A0J9YXQ4 647 aa13.21□□□□□ -0.29
PKP4-206ENST00000452162 TM4SF1P30408 202 aa13.21□□□□□ -0.29
PKP4-206ENST00000452162 DDR1Q08345 913 aa13.21□□□□□ -0.29
PKP4-206ENST00000452162 NFIXQ14938 502 aa13.21□□□□□ -0.29
PKP4-206ENST00000452162 NFKBIBQ15653 356 aa13.21□□□□□ -0.29
PKP4-206ENST00000452162 TBC1D9BQ66K14 1250 aa13.21□□□□□ -0.29
PKP4-206ENST00000452162 BICDL1Q6ZP65 573 aa13.21□□□□□ -0.29
PKP4-206ENST00000452162 COPS6Q7L5N1 327 aa13.21□□□□□ -0.29
PKP4-206ENST00000452162 XAGE3Q8WTP9 111 aa13.21□□□□□ -0.29
PKP4-206ENST00000452162 ADCY9O60503 1353 aa13.21□□□□□ -0.29
PKP4-206ENST00000452162 APBB1O00213 710 aa13.21□□□□□ -0.3
PKP4-206ENST00000452162 SRCIN1Q9C0H9 1055 aa13.21□□□□□ -0.3
PKP4-206ENST00000452162 ZBTB3Q9H5J0 574 aa13.21□□□□□ -0.3
PKP4-206ENST00000452162 IBTKQ9P2D0 1353 aaPredicted RBP13.2□□□□□ -0.3
PKP4-206ENST00000452162 UBTFL1P0CB47 393 aaPredicted RBP13.2□□□□□ -0.3
PKP4-206ENST00000452162 BEND3Q5T5X7 828 aa13.2□□□□□ -0.3
PKP4-206ENST00000452162 DNAAF4Q8WXU2 420 aa13.2□□□□□ -0.3
PKP4-206ENST00000452162 ANTXR1Q9H6X2 564 aa13.2□□□□□ -0.3
PKP4-206ENST00000452162 MAP3K15Q6ZN16 1313 aa13.2□□□□□ -0.3
PKP4-206ENST00000452162 UTRNP46939 3433 aa13.2□□□□□ -0.3
PKP4-206ENST00000452162 KIF6Q6ZMV9 814 aa13.2□□□□□ -0.3
PKP4-206ENST00000452162 KLHL34Q8N239 644 aa13.2□□□□□ -0.3
PKP4-206ENST00000452162 FHDC1Q9C0D6 1143 aaPredicted RBP13.2□□□□□ -0.3
PKP4-206ENST00000452162 OSBPL3Q9H4L5 887 aa13.2□□□□□ -0.3
PKP4-206ENST00000452162 EXOC6BQ9Y2D4 811 aa13.2□□□□□ -0.3
PKP4-206ENST00000452162 SALL3Q9BXA9 1300 aa13.19□□□□□ -0.3
PKP4-206ENST00000452162 PI4KAP2A4QPH2 592 aa13.19□□□□□ -0.3
PKP4-206ENST00000452162 POLRMTO00411 1230 aaKnown RBP13.19□□□□□ -0.3
PKP4-206ENST00000452162 PI4KAP1Q8N8J0 262 aa13.19□□□□□ -0.3
PKP4-206ENST00000452162 HYPKQ9NX55 129 aa13.19□□□□□ -0.3
PKP4-206ENST00000452162 PARP3Q9Y6F1 533 aa13.19□□□□□ -0.3
PKP4-206ENST00000452162 ERVV-1B6SEH8 477 aa13.18□□□□□ -0.3
PKP4-206ENST00000452162 CLEC4GQ6UXB4 293 aa13.18□□□□□ -0.3
PKP4-206ENST00000452162 SDSP20132 328 aa13.18□□□□□ -0.3
PKP4-206ENST00000452162 SSH3Q8TE77 659 aa13.18□□□□□ -0.3
PKP4-206ENST00000452162 KIF2CQ99661 725 aa13.18□□□□□ -0.3
PKP4-206ENST00000452162 ZNF652Q9Y2D9 606 aa13.18□□□□□ -0.3
PKP4-206ENST00000452162 PDE1AP54750 535 aa13.17□□□□□ -0.3
PKP4-206ENST00000452162 SYT17Q9BSW7 474 aa13.17□□□□□ -0.3
PKP4-206ENST00000452162 LRRCC1Q9C099 1032 aa13.17□□□□□ -0.3
PKP4-206ENST00000452162 NRXN2Q9P2S2 1712 aa13.17□□□□□ -0.3
PKP4-206ENST00000452162 EIF5BO60841 1220 aaKnown RBP13.17□□□□□ -0.3
PKP4-206ENST00000452162 DEKP35659 375 aaKnown RBP13.17□□□□□ -0.3
PKP4-206ENST00000452162 POLA2Q14181 598 aa13.17□□□□□ -0.3
PKP4-206ENST00000452162 SNX21Q969T3 373 aa13.17□□□□□ -0.3
PKP4-206ENST00000452162 SETDB2Q96T68 719 aa13.17□□□□□ -0.3
PKP4-206ENST00000452162 ARFGEF2Q9Y6D5 1785 aa13.17□□□□□ -0.3
PKP4-206ENST00000452162 KIF13BQ9NQT8 1826 aa13.16□□□□□ -0.3
PKP4-206ENST00000452162 SERPINB2P05120 415 aa13.16□□□□□ -0.3
PKP4-206ENST00000452162 GIGYF2Q6Y7W6 1299 aaKnown RBP13.16□□□□□ -0.3
PKP4-206ENST00000452162 SLKQ9H2G2 1235 aaPredicted RBP13.16□□□□□ -0.3
PKP4-206ENST00000452162 NIP7Q9Y221 180 aaKnown RBP eCLIP13.16□□□□□ -0.3
PKP4-206ENST00000452162 ANKRD36CQ5JPF3 1778 aa13.16□□□□□ -0.3
PKP4-206ENST00000452162 RGL2O15211 777 aa13.16□□□□□ -0.3
PKP4-206ENST00000452162 NBPF7P0C2Y1 421 aaPredicted RBP13.16□□□□□ -0.3
PKP4-206ENST00000452162 ANKRD13DQ6ZTN6 518 aa13.16□□□□□ -0.3
PKP4-206ENST00000452162 GPTP24298 496 aa13.15□□□□□ -0.3
PKP4-206ENST00000452162 KSR2Q6VAB6 950 aa13.15□□□□□ -0.3
PKP4-206ENST00000452162 NLGN2Q8NFZ4 835 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms