RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 CACNA1FO60840 1977 aa20.31■□□□□ 0.84
SCUBE2-202ENST00000450649 GOLGA6L4A6NEF3 574 aa20.31■□□□□ 0.84
SCUBE2-202ENST00000450649 RAB11FIP3O75154 756 aa20.31■□□□□ 0.84
SCUBE2-202ENST00000450649 IRX5P78411 483 aaPredicted RBP20.31■□□□□ 0.84
SCUBE2-202ENST00000450649 N4BP2Q86UW6 1770 aaPredicted RBP20.31■□□□□ 0.84
SCUBE2-202ENST00000450649 USP27XA6NNY8 438 aa20.31■□□□□ 0.84
SCUBE2-202ENST00000450649 SURF6O75683 361 aaKnown RBP20.31■□□□□ 0.84
SCUBE2-202ENST00000450649 DNAJC25Q9H1X3 360 aa20.31■□□□□ 0.84
SCUBE2-202ENST00000450649 FAM53CQ9NYF3 392 aa20.31■□□□□ 0.84
SCUBE2-202ENST00000450649 CYP46A1Q9Y6A2 500 aa20.31■□□□□ 0.84
SCUBE2-202ENST00000450649 NECTIN2Q92692 538 aa20.3■□□□□ 0.84
SCUBE2-202ENST00000450649 DDX19AQ9NUU7 478 aaKnown RBP20.3■□□□□ 0.84
SCUBE2-202ENST00000450649 LTKP29376 864 aa20.3■□□□□ 0.84
SCUBE2-202ENST00000450649 RBM43Q6ZSC3 357 aaKnown RBP20.3■□□□□ 0.84
SCUBE2-202ENST00000450649 RHPN1Q8TCX5 695 aa20.3■□□□□ 0.84
SCUBE2-202ENST00000450649 DDX54Q8TDD1 881 aaKnown RBP20.3■□□□□ 0.84
SCUBE2-202ENST00000450649 CLSTN2Q9H4D0 955 aa20.3■□□□□ 0.84
SCUBE2-202ENST00000450649 ZSWIM6Q9HCJ5 1215 aa20.3■□□□□ 0.84
SCUBE2-202ENST00000450649 CCDC171Q6TFL3 1326 aa20.3■□□□□ 0.84
SCUBE2-202ENST00000450649 VGLL3A8MV65 326 aa20.3■□□□□ 0.84
SCUBE2-202ENST00000450649 PTH1RQ03431 593 aa20.3■□□□□ 0.84
SCUBE2-202ENST00000450649 PRPF40BQ6NWY9 871 aaKnown RBP20.3■□□□□ 0.84
SCUBE2-202ENST00000450649 FBXO38Q6PIJ6 1188 aa20.3■□□□□ 0.84
SCUBE2-202ENST00000450649 LRRC8AQ8IWT6 810 aa20.3■□□□□ 0.84
SCUBE2-202ENST00000450649 CDK11BP21127 795 aaKnown RBP20.29■□□□□ 0.84
SCUBE2-202ENST00000450649 PDE4CQ08493 712 aa20.29■□□□□ 0.84
SCUBE2-202ENST00000450649 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
SCUBE2-202ENST00000450649 PTPN14Q15678 1187 aa20.29■□□□□ 0.84
SCUBE2-202ENST00000450649 IL17REQ8NFR9 667 aa20.29■□□□□ 0.84
SCUBE2-202ENST00000450649 TFIP11Q9UBB9 837 aaKnown RBP20.29■□□□□ 0.84
SCUBE2-202ENST00000450649 RBM6P78332 1123 aaKnown RBP20.29■□□□□ 0.84
SCUBE2-202ENST00000450649 TIGD1Q96MW7 591 aa20.29■□□□□ 0.84
SCUBE2-202ENST00000450649 MAP3K5Q99683 1374 aa20.28■□□□□ 0.84
SCUBE2-202ENST00000450649 ARID5BQ14865 1188 aa20.28■□□□□ 0.84
SCUBE2-202ENST00000450649 NGDNQ8NEJ9 315 aaKnown RBP20.28■□□□□ 0.84
SCUBE2-202ENST00000450649 SPATA32Q96LK8 384 aa20.28■□□□□ 0.84
SCUBE2-202ENST00000450649 ERICH4A6NGS2 130 aa20.28■□□□□ 0.84
SCUBE2-202ENST00000450649 CDC25BP30305 580 aa20.28■□□□□ 0.84
SCUBE2-202ENST00000450649 POLA2Q14181 598 aa20.28■□□□□ 0.84
SCUBE2-202ENST00000450649 ELF2Q15723 593 aa20.28■□□□□ 0.84
SCUBE2-202ENST00000450649 TM6SF1Q9BZW5 370 aa20.28■□□□□ 0.84
SCUBE2-202ENST00000450649 SCAND2PQ9GZW5 306 aaPredicted RBP20.28■□□□□ 0.84
SCUBE2-202ENST00000450649 NPHP3Q7Z494 1330 aa20.28■□□□□ 0.84
SCUBE2-202ENST00000450649 NYAP1Q6ZVC0 841 aa20.27■□□□□ 0.84
SCUBE2-202ENST00000450649 PPP1R42Q7Z4L9 355 aa20.27■□□□□ 0.84
SCUBE2-202ENST00000450649 TPCN1Q9ULQ1 816 aa20.27■□□□□ 0.84
SCUBE2-202ENST00000450649 NR1I2O75469 434 aa20.27■□□□□ 0.84
SCUBE2-202ENST00000450649 ERO1AQ96HE7 468 aa20.27■□□□□ 0.84
SCUBE2-202ENST00000450649 ST7Q9NRC1 585 aa20.27■□□□□ 0.84
SCUBE2-202ENST00000450649 NAP1L2Q9ULW6 460 aaPredicted RBP20.26■□□□□ 0.83
SCUBE2-202ENST00000450649 LEO1Q8WVC0 666 aaPredicted RBP20.26■□□□□ 0.83
SCUBE2-202ENST00000450649 SKILP12757 684 aa20.25■□□□□ 0.83
SCUBE2-202ENST00000450649 HDGFL1Q5TGJ6 251 aa20.25■□□□□ 0.83
SCUBE2-202ENST00000450649 KIF1BPQ96EK5 621 aa20.25■□□□□ 0.83
SCUBE2-202ENST00000450649 PDIA4P13667 645 aaKnown RBP20.25■□□□□ 0.83
SCUBE2-202ENST00000450649 PDCP20941 246 aa20.25■□□□□ 0.83
SCUBE2-202ENST00000450649 SLC26A8Q96RN1 970 aa20.25■□□□□ 0.83
SCUBE2-202ENST00000450649 NWD1Q149M9 1564 aa20.24■□□□□ 0.83
SCUBE2-202ENST00000450649 PIK3C2AO00443 1686 aa20.24■□□□□ 0.83
SCUBE2-202ENST00000450649 NEMFO60524 1076 aa20.24■□□□□ 0.83
SCUBE2-202ENST00000450649 HOXC9P31274 260 aa20.24■□□□□ 0.83
SCUBE2-202ENST00000450649 SLFNL1Q499Z3 407 aa20.24■□□□□ 0.83
SCUBE2-202ENST00000450649 RUFY2Q8WXA3 655 aa20.24■□□□□ 0.83
SCUBE2-202ENST00000450649 AMOTL2Q9Y2J4 779 aa20.24■□□□□ 0.83
SCUBE2-202ENST00000450649 BICD2Q8TD16 824 aa20.24■□□□□ 0.83
SCUBE2-202ENST00000450649 KCNB2Q92953 911 aa20.24■□□□□ 0.83
SCUBE2-202ENST00000450649 TRMT1Q9NXH9 659 aaKnown RBP20.24■□□□□ 0.83
SCUBE2-202ENST00000450649 GOLGA6L19H0YKK7 550 aa20.23■□□□□ 0.83
SCUBE2-202ENST00000450649 NLRP6P59044 892 aa20.23■□□□□ 0.83
SCUBE2-202ENST00000450649 PHAXQ9H814 394 aaKnown RBP20.23■□□□□ 0.83
SCUBE2-202ENST00000450649 CALCOCO1Q9P1Z2 691 aa20.23■□□□□ 0.83
SCUBE2-202ENST00000450649 ERBB3P21860 1342 aa20.23■□□□□ 0.83
SCUBE2-202ENST00000450649 ZNF446Q9NWS9 450 aa20.23■□□□□ 0.83
SCUBE2-202ENST00000450649 SLU7O95391 586 aaKnown RBP20.23■□□□□ 0.83
SCUBE2-202ENST00000450649 SARM1Q6SZW1 724 aa20.23■□□□□ 0.83
SCUBE2-202ENST00000450649 PGBD1Q96JS3 809 aa20.23■□□□□ 0.83
SCUBE2-202ENST00000450649 SRGAP3O43295 1099 aa20.22■□□□□ 0.83
SCUBE2-202ENST00000450649 IQCB1Q15051 598 aa20.22■□□□□ 0.83
SCUBE2-202ENST00000450649 NECTIN1Q15223 517 aa20.22■□□□□ 0.83
SCUBE2-202ENST00000450649 MRFAP1L1Q96HT8 127 aa20.22■□□□□ 0.83
SCUBE2-202ENST00000450649 NPHP1O15259 732 aa20.22■□□□□ 0.83
SCUBE2-202ENST00000450649 ZKSCAN1P17029 563 aaPredicted RBP20.22■□□□□ 0.83
SCUBE2-202ENST00000450649 CAVIN2O95810 425 aa20.21■□□□□ 0.83
SCUBE2-202ENST00000450649 LARP1Q6PKG0 1096 aaKnown RBP20.21■□□□□ 0.83
SCUBE2-202ENST00000450649 CCDC69A6NI79 296 aa20.21■□□□□ 0.83
SCUBE2-202ENST00000450649 FAM193AP78312 1265 aa20.21■□□□□ 0.83
SCUBE2-202ENST00000450649 COL9A3Q14050 684 aaPredicted RBP20.21■□□□□ 0.83
SCUBE2-202ENST00000450649 USP16Q9Y5T5 823 aa20.21■□□□□ 0.83
SCUBE2-202ENST00000450649 DIP2AQ14689 1571 aa20.21■□□□□ 0.83
SCUBE2-202ENST00000450649 GLRX3O76003 335 aaKnown RBP20.2■□□□□ 0.82
SCUBE2-202ENST00000450649 CCZ1BP86790 482 aa20.2■□□□□ 0.82
SCUBE2-202ENST00000450649 CCZ1P86791 482 aaPredicted RBP20.2■□□□□ 0.82
SCUBE2-202ENST00000450649 CCAR2Q8N163 923 aaKnown RBP20.2■□□□□ 0.82
SCUBE2-202ENST00000450649 HSP90AB4PQ58FF6 505 aa20.2■□□□□ 0.82
SCUBE2-202ENST00000450649 C11orf57Q6ZUT1 292 aaPredicted RBP20.2■□□□□ 0.82
SCUBE2-202ENST00000450649 FILIP1Q7Z7B0 1213 aa20.2■□□□□ 0.82
SCUBE2-202ENST00000450649 TBX22Q9Y458 520 aa20.2■□□□□ 0.82
SCUBE2-202ENST00000450649 EID1Q9Y6B2 187 aa20.2■□□□□ 0.82
SCUBE2-202ENST00000450649 USP42Q9H9J4 1324 aaKnown RBP20.2■□□□□ 0.82
SCUBE2-202ENST00000450649 CREB3L3Q68CJ9 461 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms