RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 TEX11Q8IYF3 940 aa2.54□□□□□ -2
USP53-202ENST00000450251 L3MBTL2Q969R5 705 aa2.54□□□□□ -2
USP53-202ENST00000450251 RAB3IPQ96QF0 476 aaPredicted RBP2.54□□□□□ -2
USP53-202ENST00000450251 TRIM7Q9C029 511 aa2.54□□□□□ -2
USP53-202ENST00000450251 GNL3LQ9NVN8 582 aaKnown RBP2.54□□□□□ -2
USP53-202ENST00000450251 KDM5DQ9BY66 1539 aa2.54□□□□□ -2
USP53-202ENST00000450251 BLMP54132 1417 aaPredicted RBP2.54□□□□□ -2
USP53-202ENST00000450251 PTPRCP08575 1304 aa2.54□□□□□ -2
USP53-202ENST00000450251 CTAGE15A4D2H0 777 aa2.54□□□□□ -2
USP53-202ENST00000450251 GIGYF1O75420 1035 aaPredicted RBP2.54□□□□□ -2
USP53-202ENST00000450251 SERPINC1P01008 464 aa2.54□□□□□ -2
USP53-202ENST00000450251 CTAGE8P0CG41 777 aa2.54□□□□□ -2
USP53-202ENST00000450251 LMNB2Q03252 620 aa2.54□□□□□ -2
USP53-202ENST00000450251 BIRC2Q13490 618 aa2.54□□□□□ -2
USP53-202ENST00000450251 CPLX2Q6PUV4 134 aaKnown RBP2.54□□□□□ -2
USP53-202ENST00000450251 CTAGE6Q86UF2 777 aa2.54□□□□□ -2
USP53-202ENST00000450251 SUGP1Q8IWZ8 645 aaKnown RBP2.54□□□□□ -2
USP53-202ENST00000450251 CTAGE4Q8IX94 777 aa2.54□□□□□ -2
USP53-202ENST00000450251 DDX27Q96GQ7 796 aaKnown RBP2.54□□□□□ -2
USP53-202ENST00000450251 INTS4Q96HW7 963 aaKnown RBP2.54□□□□□ -2
USP53-202ENST00000450251 MPHOSPH8Q99549 860 aa2.54□□□□□ -2
USP53-202ENST00000450251 IQCGQ9H095 443 aaKnown RBP2.54□□□□□ -2
USP53-202ENST00000450251 ANO2Q9NQ90 1003 aa2.54□□□□□ -2
USP53-202ENST00000450251 RABGAP1Q9Y3P9 1069 aa2.54□□□□□ -2
USP53-202ENST00000450251 ARHGEF12Q9NZN5 1544 aa2.54□□□□□ -2
USP53-202ENST00000450251 CHD1O14646 1710 aa2.54□□□□□ -2
USP53-202ENST00000450251 LRRD1A4D1F6 860 aa2.54□□□□□ -2
USP53-202ENST00000450251 ZSCAN20P17040 1043 aaPredicted RBP2.54□□□□□ -2
USP53-202ENST00000450251 VAV2P52735 878 aa2.54□□□□□ -2
USP53-202ENST00000450251 RAD51AP2Q09MP3 1159 aa2.54□□□□□ -2
USP53-202ENST00000450251 PPFIA1Q13136 1202 aa2.54□□□□□ -2
USP53-202ENST00000450251 TRIM29Q14134 588 aa2.54□□□□□ -2
USP53-202ENST00000450251 SEPT2Q15019 361 aa2.54□□□□□ -2
USP53-202ENST00000450251 NKX1-1Q15270 411 aaPredicted RBP2.54□□□□□ -2
USP53-202ENST00000450251 ARHGAP29Q52LW3 1261 aa2.54□□□□□ -2
USP53-202ENST00000450251 SAAL1Q96ER3 474 aa2.54□□□□□ -2
USP53-202ENST00000450251 PPP1R1BQ9UD71 204 aaPredicted RBP2.54□□□□□ -2
USP53-202ENST00000450251 ZBTB12Q9Y330 459 aaPredicted RBP2.54□□□□□ -2
USP53-202ENST00000450251 KIF13AQ9H1H9 1805 aa2.54□□□□□ -2
USP53-202ENST00000450251 RPGRIP1LQ68CZ1 1315 aa2.53□□□□□ -2
USP53-202ENST00000450251 TTC41PQ6P2S7 1318 aa2.53□□□□□ -2
USP53-202ENST00000450251 RALGAPBQ86X10 1494 aa2.53□□□□□ -2
USP53-202ENST00000450251 CFAP65Q6ZU64 1925 aaKnown RBP2.53□□□□□ -2
USP53-202ENST00000450251 MYO1CO00159 1063 aa2.53□□□□□ -2
USP53-202ENST00000450251 CHUKO15111 745 aa2.53□□□□□ -2
USP53-202ENST00000450251 DHX16O60231 1041 aaKnown RBP2.53□□□□□ -2
USP53-202ENST00000450251 SSFA2P28290 1259 aa2.53□□□□□ -2
USP53-202ENST00000450251 ICA1Q05084 483 aa2.53□□□□□ -2
USP53-202ENST00000450251 SFSWAPQ12872 951 aaKnown RBP2.53□□□□□ -2
USP53-202ENST00000450251 CRYMQ14894 314 aa2.53□□□□□ -2
USP53-202ENST00000450251 ISM2Q6H9L7 571 aa2.53□□□□□ -2
USP53-202ENST00000450251 SDCCAG8Q86SQ7 713 aaPredicted RBP2.53□□□□□ -2
USP53-202ENST00000450251 TADA2BQ86TJ2 420 aa2.53□□□□□ -2
USP53-202ENST00000450251 CHD1LQ86WJ1 897 aa2.53□□□□□ -2
USP53-202ENST00000450251 P3H3Q8IVL6 736 aa2.53□□□□□ -2
USP53-202ENST00000450251 CCAR1Q8IX12 1150 aaKnown RBP2.53□□□□□ -2
USP53-202ENST00000450251 TEX9Q8N6V9 391 aa2.53□□□□□ -2
USP53-202ENST00000450251 PPFIBP2Q8ND30 876 aa2.53□□□□□ -2
USP53-202ENST00000450251 RUBCNQ92622 972 aa2.53□□□□□ -2
USP53-202ENST00000450251 SPATA32Q96LK8 384 aa2.53□□□□□ -2
USP53-202ENST00000450251 TMEM51Q9NW97 253 aa2.53□□□□□ -2
USP53-202ENST00000450251 CHIC2Q9UKJ5 165 aa2.53□□□□□ -2
USP53-202ENST00000450251 KDM2AQ9Y2K7 1162 aa2.53□□□□□ -2
USP53-202ENST00000450251 PHLPP2Q6ZVD8 1323 aa2.53□□□□□ -2
USP53-202ENST00000450251 FLOT1O75955 427 aa2.53□□□□□ -2
USP53-202ENST00000450251 CYP2C19P33261 490 aa2.53□□□□□ -2
USP53-202ENST00000450251 PLCB4Q15147 1175 aa2.53□□□□□ -2
USP53-202ENST00000450251 ODF2Q5BJF6 829 aa2.53□□□□□ -2
USP53-202ENST00000450251 CCDC170Q8IYT3 715 aa2.53□□□□□ -2
USP53-202ENST00000450251 PDILTQ8N807 584 aa2.53□□□□□ -2
USP53-202ENST00000450251 ANKRD7Q92527 254 aa2.53□□□□□ -2
USP53-202ENST00000450251 IQCDQ96DY2 449 aa2.53□□□□□ -2
USP53-202ENST00000450251 ANKRD27Q96NW4 1050 aa2.53□□□□□ -2
USP53-202ENST00000450251 SPTLC3Q9NUV7 552 aa2.53□□□□□ -2
USP53-202ENST00000450251 ZNF777Q9ULD5 760 aaPredicted RBP2.53□□□□□ -2
USP53-202ENST00000450251 VPS37CA5D8V6 355 aaPredicted RBP2.53□□□□□ -2
USP53-202ENST00000450251 RIPK4P57078 832 aa2.53□□□□□ -2
USP53-202ENST00000450251 ATL3Q6DD88 541 aa2.53□□□□□ -2
USP53-202ENST00000450251 CEP57Q86XR8 500 aa2.53□□□□□ -2
USP53-202ENST00000450251 MOV10L1Q9BXT6 1211 aaKnown RBP2.53□□□□□ -2
USP53-202ENST00000450251 ETAA1Q9NY74 926 aa2.53□□□□□ -2
USP53-202ENST00000450251 ODF2LQ9ULJ1 636 aa2.53□□□□□ -2
USP53-202ENST00000450251 TPX2Q9ULW0 747 aaKnown RBP2.53□□□□□ -2
USP53-202ENST00000450251 SNAPC4Q5SXM2 1469 aa2.53□□□□□ -2
USP53-202ENST00000450251 CDKL5O76039 1030 aa2.53□□□□□ -2
USP53-202ENST00000450251 MMP14P50281 582 aa2.53□□□□□ -2
USP53-202ENST00000450251 IRX4P78413 519 aa2.53□□□□□ -2
USP53-202ENST00000450251 KANK4Q5T7N3 995 aaPredicted RBP2.53□□□□□ -2
USP53-202ENST00000450251 PHLDB2Q86SQ0 1253 aa2.53□□□□□ -2
USP53-202ENST00000450251 CNTROBQ8N137 903 aa2.53□□□□□ -2
USP53-202ENST00000450251 PIP4P2Q8N4L2 257 aa2.53□□□□□ -2
USP53-202ENST00000450251 WHAMMQ8TF30 809 aa2.53□□□□□ -2
USP53-202ENST00000450251 N4BP2L2Q92802 583 aaPredicted RBP2.53□□□□□ -2
USP53-202ENST00000450251 SCLT1Q96NL6 688 aa2.53□□□□□ -2
USP53-202ENST00000450251 ALS2CR12Q96Q35 445 aa2.53□□□□□ -2
USP53-202ENST00000450251 HOMER3Q9NSC5 361 aa2.53□□□□□ -2
USP53-202ENST00000450251 LIMCH1Q9UPQ0 1083 aa2.53□□□□□ -2
USP53-202ENST00000450251 MAP3K5Q99683 1374 aa2.53□□□□□ -2.01
USP53-202ENST00000450251 ANKRD30BQ9BXX2 1392 aa2.53□□□□□ -2.01
USP53-202ENST00000450251 LOC102724159A0A0B4J2E5 919 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms