RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 DMRTB1Q96MA1 342 aa4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 PUS7Q96PZ0 661 aaKnown RBP4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 C2orf49Q9BVC5 232 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 GTPBP4Q9BZE4 634 aaKnown RBP4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 CYLDQ9NQC7 956 aa4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 SCHIP1Q9P0W5 487 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 STIM2Q9P246 746 aa4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 DNMT3LQ9UJW3 386 aa4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 ABCA5Q8WWZ7 1642 aa4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 FAM181BA6NEQ2 426 aa4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 LILRA1O75019 489 aa4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 PPFIA3O75145 1194 aa4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 PRPF40AO75400 957 aaKnown RBP4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 UPP2O95045 317 aa4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 LETM1O95202 739 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 GNRH1P01148 92 aa4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 LDHBP07195 334 aaKnown RBP4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 VSIG8P0DPA2 414 aa4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 RIPK4P57078 832 aa4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 RAD51AP2Q09MP3 1159 aa4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 POTEAQ6S8J7 498 aa4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 TMC4Q7Z404 712 aa4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 SLC9A9Q8IVB4 645 aa4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 CCDC116Q8IYX3 515 aa4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 FAM177A1Q8N128 213 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 ZNF784Q8NCA9 323 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 TMC1Q8TDI8 760 aa4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 ZNF622Q969S3 477 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 QTRT2Q9H974 415 aaKnown RBP4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 PARP2Q9UGN5 583 aa4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 SOS2Q07890 1332 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P8-201ENST00000449709 A6NJY4 79 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 TCERG1O14776 1098 aaKnown RBP4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 ZBTB39O15060 712 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 GPR182O15218 404 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 MCCP23508 829 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 MAPK8P45983 427 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 SMTNP53814 917 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 DAB2P98082 770 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 XPCQ01831 940 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 CBLBQ13191 982 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 SF3A1Q15459 793 aaKnown RBP4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 TBCELQ5QJ74 424 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 PPP1R26Q5T8A7 1209 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 C9orf131Q5VYM1 1079 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 CYP2U1Q7Z449 544 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 METTL16Q86W50 562 aaKnown RBP4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 CEP120Q8N960 986 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 PIK3R5Q8WYR1 880 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 UBXN4Q92575 508 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 ALKBH8Q96BT7 664 aaKnown RBP4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 MYO19Q96H55 970 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 FAM161BQ96MY7 647 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 DUSP9Q99956 384 aaKnown RBP4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 RNF19AQ9NV58 838 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 LRFN2Q9ULH4 789 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 ISY1Q9ULR0 285 aaKnown RBP4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 EMILIN1Q9Y6C2 1016 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 SMG6Q86US8 1419 aaKnown RBP4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 SCAPERQ9BY12 1400 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 NCOA2Q15596 1464 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 CEP164Q9UPV0 1460 aa4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 POLR1AO95602 1720 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P8-201ENST00000449709 CCDC144AA2RUR9 1427 aa4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 CDK2AP1O14519 115 aa4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 HMGB1P09429 215 aaKnown RBP4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 ADD1P35611 737 aaKnown RBP4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 PSMA6P60900 246 aaKnown RBP4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 IRX3P78415 501 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 PDE3BQ13370 1112 aa4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 ESCO1Q5FWF5 840 aa4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 FAM26DQ5JW98 314 aa4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 CNPY4Q8N129 248 aa4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 ABTB2Q8N961 1025 aa4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 TMEM87AQ8NBN3 555 aa4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 XAGE2Q96GT9 111 aa4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 TSEN34Q9BSV6 310 aaKnown RBP4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 SLC52A1Q9NWF4 448 aa4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 WWC3Q9ULE0 1092 aa4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 IQSEC3Q9UPP2 1182 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P8-201ENST00000449709 FIGNL2A6NMB9 653 aa4.58□□□□□ -1.68
HMGB3P8-201ENST00000449709 TTLL8A6PVC2 850 aa4.58□□□□□ -1.68
HMGB3P8-201ENST00000449709 SORBS3O60504 671 aa4.58□□□□□ -1.68
HMGB3P8-201ENST00000449709 FANCCQ00597 558 aa4.58□□□□□ -1.68
HMGB3P8-201ENST00000449709 ENOX2Q16206 610 aaKnown RBP4.58□□□□□ -1.68
HMGB3P8-201ENST00000449709 NT5DC4Q86YG4 428 aa4.58□□□□□ -1.68
HMGB3P8-201ENST00000449709 GJD3Q8N144 294 aa4.58□□□□□ -1.68
HMGB3P8-201ENST00000449709 SETDB2Q96T68 719 aa4.58□□□□□ -1.68
HMGB3P8-201ENST00000449709 NIF3L1Q9GZT8 377 aa4.58□□□□□ -1.68
HMGB3P8-201ENST00000449709 MRS2Q9HD23 443 aa4.58□□□□□ -1.68
HMGB3P8-201ENST00000449709 METTL5Q9NRN9 209 aaKnown RBP4.58□□□□□ -1.68
HMGB3P8-201ENST00000449709 GEMIN8Q9NWZ8 242 aaKnown RBP4.58□□□□□ -1.68
HMGB3P8-201ENST00000449709 POLIQ9UNA4 740 aa4.58□□□□□ -1.68
HMGB3P8-201ENST00000449709 HRH3Q9Y5N1 445 aa4.58□□□□□ -1.68
HMGB3P8-201ENST00000449709 USP3Q9Y6I4 520 aa4.58□□□□□ -1.68
HMGB3P8-201ENST00000449709 WDR97A6NE52 1622 aa4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 RRBP1Q9P2E9 1410 aaKnown RBP4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 OFD1O75665 1012 aa4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 CLSTN1O94985 981 aa4.57□□□□□ -1.68
HMGB3P8-201ENST00000449709 IL2RAP01589 272 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms