RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 C9orf78Q9NZ63 289 aaPredicted RBP18.45■□□□□ 0.54
SHANK2-210ENST00000449116 AFDNP55196 1824 aaKnown RBP18.44■□□□□ 0.54
SHANK2-210ENST00000449116 ZBTB7BO15156 539 aaPredicted RBP18.44■□□□□ 0.54
SHANK2-210ENST00000449116 NFIXQ14938 502 aa18.44■□□□□ 0.54
SHANK2-210ENST00000449116 PPP1R42Q7Z4L9 355 aa18.44■□□□□ 0.54
SHANK2-210ENST00000449116 PDGFDQ9GZP0 370 aaPredicted RBP18.44■□□□□ 0.54
SHANK2-210ENST00000449116 USP44Q9H0E7 712 aa18.44■□□□□ 0.54
SHANK2-210ENST00000449116 CARMIL3Q8ND23 1372 aa18.43■□□□□ 0.54
SHANK2-210ENST00000449116 GRM8O00222 908 aa18.43■□□□□ 0.54
SHANK2-210ENST00000449116 TM4SF1P30408 202 aa18.43■□□□□ 0.54
SHANK2-210ENST00000449116 SUSD4Q5VX71 490 aa18.43■□□□□ 0.54
SHANK2-210ENST00000449116 MEIS3Q99687 375 aa18.43■□□□□ 0.54
SHANK2-210ENST00000449116 GNAI3P08754 354 aa18.42■□□□□ 0.54
SHANK2-210ENST00000449116 MSL1Q68DK7 614 aa18.42■□□□□ 0.54
SHANK2-210ENST00000449116 EXOC6Q8TAG9 804 aa18.42■□□□□ 0.54
SHANK2-210ENST00000449116 UTP14AQ9BVJ6 771 aaKnown RBP18.42■□□□□ 0.54
SHANK2-210ENST00000449116 COL24A1Q17RW2 1714 aa18.42■□□□□ 0.54
SHANK2-210ENST00000449116 UTYO14607 1347 aa18.42■□□□□ 0.54
SHANK2-210ENST00000449116 CASZ1Q86V15 1759 aa18.42■□□□□ 0.54
SHANK2-210ENST00000449116 PSDA5PKW4 1024 aaPredicted RBP18.41■□□□□ 0.54
SHANK2-210ENST00000449116 H7C1W4 665 aa18.41■□□□□ 0.54
SHANK2-210ENST00000449116 NTSR2O95665 410 aa18.41■□□□□ 0.54
SHANK2-210ENST00000449116 PCCAP05165 728 aaPredicted RBP18.41■□□□□ 0.54
SHANK2-210ENST00000449116 NBPF7P0C2Y1 421 aaPredicted RBP18.41■□□□□ 0.54
SHANK2-210ENST00000449116 ZBTB38Q8NAP3 1195 aaPredicted RBP18.41■□□□□ 0.54
SHANK2-210ENST00000449116 NYXQ9GZU5 481 aa18.41■□□□□ 0.54
SHANK2-210ENST00000449116 TRMT112Q9UI30 125 aaKnown RBP18.41■□□□□ 0.54
SHANK2-210ENST00000449116 FAM177BA6PVY3 158 aa18.4■□□□□ 0.54
SHANK2-210ENST00000449116 UBTFL1P0CB47 393 aaPredicted RBP18.4■□□□□ 0.54
SHANK2-210ENST00000449116 AAMPQ13685 434 aa18.4■□□□□ 0.54
SHANK2-210ENST00000449116 UBE3BQ7Z3V4 1068 aa18.4■□□□□ 0.54
SHANK2-210ENST00000449116 NBPF5PQ86XG9 351 aaPredicted RBP18.4■□□□□ 0.54
SHANK2-210ENST00000449116 POLRMTO00411 1230 aaKnown RBP18.39■□□□□ 0.53
SHANK2-210ENST00000449116 CASP7P55210 303 aa18.39■□□□□ 0.53
SHANK2-210ENST00000449116 DDR1Q08345 913 aa18.39■□□□□ 0.53
SHANK2-210ENST00000449116 TPTE2Q6XPS3 522 aa18.39■□□□□ 0.53
SHANK2-210ENST00000449116 FAM89AQ96GI7 184 aa18.39■□□□□ 0.53
SHANK2-210ENST00000449116 ZBTB40Q9NUA8 1239 aa18.39■□□□□ 0.53
SHANK2-210ENST00000449116 HDAC5Q9UQL6 1122 aa18.39■□□□□ 0.53
SHANK2-210ENST00000449116 SH3TC1Q8TE82 1336 aa18.39■□□□□ 0.53
SHANK2-210ENST00000449116 CDHR2Q9BYE9 1310 aa18.39■□□□□ 0.53
SHANK2-210ENST00000449116 SERPINB2P05120 415 aa18.38■□□□□ 0.53
SHANK2-210ENST00000449116 MMP10P09238 476 aa18.38■□□□□ 0.53
SHANK2-210ENST00000449116 RTL5Q5HYW3 569 aaPredicted RBP18.38■□□□□ 0.53
SHANK2-210ENST00000449116 JARID2Q92833 1246 aaPredicted RBP18.38■□□□□ 0.53
SHANK2-210ENST00000449116 MTFR1LQ9H019 292 aa18.38■□□□□ 0.53
SHANK2-210ENST00000449116 PARP3Q9Y6F1 533 aa18.38■□□□□ 0.53
SHANK2-210ENST00000449116 ZBTB7AO95365 584 aa18.37■□□□□ 0.53
SHANK2-210ENST00000449116 GNAI2P04899 355 aa18.37■□□□□ 0.53
SHANK2-210ENST00000449116 GTF2E1P29083 439 aaPredicted RBP18.37■□□□□ 0.53
SHANK2-210ENST00000449116 NUTM1Q86Y26 1132 aa18.37■□□□□ 0.53
SHANK2-210ENST00000449116 CNBD1Q8NA66 436 aa18.37■□□□□ 0.53
SHANK2-210ENST00000449116 HSP90B1P14625 803 aaKnown RBP18.36■□□□□ 0.53
SHANK2-210ENST00000449116 SUCLG2Q96I99 432 aa18.36■□□□□ 0.53
SHANK2-210ENST00000449116 LRRFIP2Q9Y608 721 aaKnown RBP18.36■□□□□ 0.53
SHANK2-210ENST00000449116 IRS4O14654 1257 aaPredicted RBP18.35■□□□□ 0.53
SHANK2-210ENST00000449116 NPHP1O15259 732 aa18.35■□□□□ 0.53
SHANK2-210ENST00000449116 ERFEQ4G0M1 354 aa18.35■□□□□ 0.53
SHANK2-210ENST00000449116 ERICH6BQ5W0A0 696 aa18.35■□□□□ 0.53
SHANK2-210ENST00000449116 PRR5LQ6MZQ0 368 aa18.35■□□□□ 0.53
SHANK2-210ENST00000449116 SYNE4Q8N205 404 aa18.35■□□□□ 0.53
SHANK2-210ENST00000449116 PLA2G12BQ9BX93 195 aa18.35■□□□□ 0.53
SHANK2-210ENST00000449116 C1orf115Q9H7X2 142 aa18.35■□□□□ 0.53
SHANK2-210ENST00000449116 ST5P78524 1137 aa18.34■□□□□ 0.53
SHANK2-210ENST00000449116 SLC10A5Q5PT55 438 aa18.34■□□□□ 0.53
SHANK2-210ENST00000449116 KAZALD1Q96I82 304 aa18.34■□□□□ 0.53
SHANK2-210ENST00000449116 ABCC12Q96J65 1359 aa18.33■□□□□ 0.53
SHANK2-210ENST00000449116 NRXN2Q9P2S2 1712 aa18.33■□□□□ 0.52
SHANK2-210ENST00000449116 ATF5Q9Y2D1 282 aaPredicted RBP18.33■□□□□ 0.52
SHANK2-210ENST00000449116 PDE8AO60658 829 aa18.32■□□□□ 0.52
SHANK2-210ENST00000449116 HCLS1P14317 486 aaPredicted RBP18.32■□□□□ 0.52
SHANK2-210ENST00000449116 POLD1P28340 1107 aa18.32■□□□□ 0.52
SHANK2-210ENST00000449116 EPHA10Q5JZY3 1008 aa18.32■□□□□ 0.52
SHANK2-210ENST00000449116 BICC1Q9H694 974 aaKnown RBP18.32■□□□□ 0.52
SHANK2-210ENST00000449116 FOXO4P98177 505 aa18.31■□□□□ 0.52
SHANK2-210ENST00000449116 CCDC24Q8N4L8 307 aa18.31■□□□□ 0.52
SHANK2-210ENST00000449116 ANKRD44Q8N8A2 993 aa18.31■□□□□ 0.52
SHANK2-210ENST00000449116 LAMB2P55268 1798 aa18.31■□□□□ 0.52
SHANK2-210ENST00000449116 RIC1Q4ADV7 1423 aa18.31■□□□□ 0.52
SHANK2-210ENST00000449116 DDX60Q8IY21 1712 aaKnown RBP18.3■□□□□ 0.52
SHANK2-210ENST00000449116 CTSWP56202 376 aa18.3■□□□□ 0.52
SHANK2-210ENST00000449116 RABL6Q3YEC7 729 aaPredicted RBP18.3■□□□□ 0.52
SHANK2-210ENST00000449116 CEP85Q6P2H3 762 aa18.3■□□□□ 0.52
SHANK2-210ENST00000449116 RPAP2Q8IXW5 612 aaPredicted RBP18.3■□□□□ 0.52
SHANK2-210ENST00000449116 MTX1Q13505 466 aa18.29■□□□□ 0.52
SHANK2-210ENST00000449116 NLRP3Q96P20 1036 aa18.29■□□□□ 0.52
SHANK2-210ENST00000449116 PCDHB15Q9Y5E8 787 aa18.29■□□□□ 0.52
SHANK2-210ENST00000449116 CSF1RP07333 972 aa18.28■□□□□ 0.52
SHANK2-210ENST00000449116 ATP8B2P98198 1209 aa18.28■□□□□ 0.52
SHANK2-210ENST00000449116 LMBR1LQ6UX01 489 aa18.28■□□□□ 0.52
SHANK2-210ENST00000449116 SGIP1Q9BQI5 828 aa18.28■□□□□ 0.52
SHANK2-210ENST00000449116 SF3B3Q15393 1217 aaKnown RBP18.27■□□□□ 0.52
SHANK2-210ENST00000449116 TTLL11Q8NHH1 800 aa18.27■□□□□ 0.52
SHANK2-210ENST00000449116 BRIP1Q9BX63 1249 aa18.27■□□□□ 0.52
SHANK2-210ENST00000449116 CHMP3Q9Y3E7 222 aa18.27■□□□□ 0.52
SHANK2-210ENST00000449116 TNRC6CQ9HCJ0 1690 aaKnown RBP18.26■□□□□ 0.51
SHANK2-210ENST00000449116 SRGAP3O43295 1099 aa18.26■□□□□ 0.51
SHANK2-210ENST00000449116 PTGER2P43116 358 aa18.26■□□□□ 0.51
SHANK2-210ENST00000449116 CCDC152Q4G0S7 254 aa18.26■□□□□ 0.51
SHANK2-210ENST00000449116 C3orf67Q6ZVT6 689 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms