RNA–Protein interactions for RNA: ENST00000448979.3

AC023509.3-201, humanhuman

TSL 1 (best)

Gene AC023509.3, Length 1,406 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC023509.3-201ENST00000448979 ZNF34Q8IZ26 560 aa16.21■□□□□ 0.19
AC023509.3-201ENST00000448979 SYNE4Q8N205 404 aa16.21■□□□□ 0.19
AC023509.3-201ENST00000448979 XAGE3Q8WTP9 111 aa16.21■□□□□ 0.19
AC023509.3-201ENST00000448979 C7orf43Q8WVR3 580 aa16.21■□□□□ 0.19
AC023509.3-201ENST00000448979 CEP350Q5VT06 3117 aa16.21■□□□□ 0.19
AC023509.3-201ENST00000448979 GOLGA2Q08379 1002 aa16.2■□□□□ 0.18
AC023509.3-201ENST00000448979 WDR63Q8IWG1 891 aa16.2■□□□□ 0.18
AC023509.3-201ENST00000448979 CNKSR1Q969H4 720 aa16.2■□□□□ 0.18
AC023509.3-201ENST00000448979 MBIPQ9NS73 344 aa16.2■□□□□ 0.18
AC023509.3-201ENST00000448979 CHPF2Q9P2E5 772 aa16.2■□□□□ 0.18
AC023509.3-201ENST00000448979 ZNF521Q96K83 1311 aa16.2■□□□□ 0.18
AC023509.3-201ENST00000448979 DICER1Q9UPY3 1922 aaKnown RBP16.2■□□□□ 0.18
AC023509.3-201ENST00000448979 KLRG2A4D1S0 409 aaPredicted RBP16.19■□□□□ 0.18
AC023509.3-201ENST00000448979 ELL2O00472 640 aaPredicted RBP16.19■□□□□ 0.18
AC023509.3-201ENST00000448979 ZBTB22O15209 634 aa16.19■□□□□ 0.18
AC023509.3-201ENST00000448979 GIGYF2Q6Y7W6 1299 aaKnown RBP16.19■□□□□ 0.18
AC023509.3-201ENST00000448979 CDCA7LQ96GN5 454 aa16.19■□□□□ 0.18
AC023509.3-201ENST00000448979 TCERG1O14776 1098 aaKnown RBP16.19■□□□□ 0.18
AC023509.3-201ENST00000448979 NTSR2O95665 410 aa16.19■□□□□ 0.18
AC023509.3-201ENST00000448979 NPR1P16066 1061 aa16.19■□□□□ 0.18
AC023509.3-201ENST00000448979 HTRA3P83110 453 aa16.19■□□□□ 0.18
AC023509.3-201ENST00000448979 ERBB4Q15303 1308 aa16.18■□□□□ 0.18
AC023509.3-201ENST00000448979 HSPA6P17066 643 aa16.18■□□□□ 0.18
AC023509.3-201ENST00000448979 GNAI1P63096 354 aa16.18■□□□□ 0.18
AC023509.3-201ENST00000448979 BABAM1Q9NWV8 329 aa16.18■□□□□ 0.18
AC023509.3-201ENST00000448979 PDZRN3Q9UPQ7 1066 aa16.18■□□□□ 0.18
AC023509.3-201ENST00000448979 TAF1P21675 1872 aa16.17■□□□□ 0.18
AC023509.3-201ENST00000448979 POTECB2RU33 542 aa16.17■□□□□ 0.18
AC023509.3-201ENST00000448979 TOMM70O94826 608 aa16.17■□□□□ 0.18
AC023509.3-201ENST00000448979 DUSP27Q5VZP5 1158 aa16.17■□□□□ 0.18
AC023509.3-201ENST00000448979 TSR2Q969E8 191 aaKnown RBP16.17■□□□□ 0.18
AC023509.3-201ENST00000448979 TAOK3Q9H2K8 898 aa16.17■□□□□ 0.18
AC023509.3-201ENST00000448979 ZNF277Q9NRM2 450 aaPredicted RBP16.17■□□□□ 0.18
AC023509.3-201ENST00000448979 IFT57Q9NWB7 429 aa16.17■□□□□ 0.18
AC023509.3-201ENST00000448979 ANKRD36CQ5JPF3 1778 aa16.16■□□□□ 0.18
AC023509.3-201ENST00000448979 IL16Q14005 1332 aa16.16■□□□□ 0.18
AC023509.3-201ENST00000448979 KDM2BQ8NHM5 1336 aa16.16■□□□□ 0.18
AC023509.3-201ENST00000448979 GLTPD2A6NH11 291 aa16.16■□□□□ 0.18
AC023509.3-201ENST00000448979 RGL2O15211 777 aa16.16■□□□□ 0.18
AC023509.3-201ENST00000448979 ZNF853P0CG23 659 aa16.16■□□□□ 0.18
AC023509.3-201ENST00000448979 HDGFL1Q5TGJ6 251 aa16.16■□□□□ 0.18
AC023509.3-201ENST00000448979 CFAP44Q96MT7 982 aa16.16■□□□□ 0.18
AC023509.3-201ENST00000448979 DDX21Q9NR30 783 aaKnown RBP eCLIP16.16■□□□□ 0.18
AC023509.3-201ENST00000448979 LAMB2P55268 1798 aa16.15■□□□□ 0.18
AC023509.3-201ENST00000448979 E9PSI1 815 aa16.15■□□□□ 0.18
AC023509.3-201ENST00000448979 SLFN5Q08AF3 891 aa16.15■□□□□ 0.18
AC023509.3-201ENST00000448979 CRY2Q49AN0 593 aa16.15■□□□□ 0.18
AC023509.3-201ENST00000448979 NYXQ9GZU5 481 aa16.15■□□□□ 0.18
AC023509.3-201ENST00000448979 MYH16Q9H6N6 1097 aa16.15■□□□□ 0.18
AC023509.3-201ENST00000448979 DDNO94850 711 aaPredicted RBP16.14■□□□□ 0.17
AC023509.3-201ENST00000448979 HCLS1P14317 486 aaPredicted RBP16.14■□□□□ 0.17
AC023509.3-201ENST00000448979 C8orf58Q8NAV2 365 aa16.14■□□□□ 0.17
AC023509.3-201ENST00000448979 ATP5J2-PTCD1G3V325 749 aa16.13■□□□□ 0.17
AC023509.3-201ENST00000448979 CCDC93Q567U6 631 aa16.13■□□□□ 0.17
AC023509.3-201ENST00000448979 NLRP10Q86W26 655 aa16.13■□□□□ 0.17
AC023509.3-201ENST00000448979 TSPYL6Q8N831 410 aa16.13■□□□□ 0.17
AC023509.3-201ENST00000448979 PHAXQ9H814 394 aaKnown RBP16.13■□□□□ 0.17
AC023509.3-201ENST00000448979 COL4A5P29400 1685 aa16.13■□□□□ 0.17
AC023509.3-201ENST00000448979 LTBP3Q9NS15 1303 aa16.13■□□□□ 0.17
AC023509.3-201ENST00000448979 FANCIQ9NVI1 1328 aa16.13■□□□□ 0.17
AC023509.3-201ENST00000448979 C16orf71Q8IYS4 520 aaPredicted RBP16.12■□□□□ 0.17
AC023509.3-201ENST00000448979 SNED1Q8TER0 1413 aa16.12■□□□□ 0.17
AC023509.3-201ENST00000448979 UTP14AQ9BVJ6 771 aaKnown RBP16.12■□□□□ 0.17
AC023509.3-201ENST00000448979 ZNF541Q9H0D2 1346 aa16.12■□□□□ 0.17
AC023509.3-201ENST00000448979 POTEIP0CG38 1075 aa16.11■□□□□ 0.17
AC023509.3-201ENST00000448979 POTEJP0CG39 1038 aa16.11■□□□□ 0.17
AC023509.3-201ENST00000448979 TCIRG1Q13488 830 aa16.11■□□□□ 0.17
AC023509.3-201ENST00000448979 RTL5Q5HYW3 569 aaPredicted RBP16.11■□□□□ 0.17
AC023509.3-201ENST00000448979 PPP1R42Q7Z4L9 355 aa16.11■□□□□ 0.17
AC023509.3-201ENST00000448979 RPGRQ92834 1020 aaKnown RBP16.11■□□□□ 0.17
AC023509.3-201ENST00000448979 COL4A1P02462 1669 aa16.11■□□□□ 0.17
AC023509.3-201ENST00000448979 FKBP4Q02790 459 aaKnown RBP eCLIP16.11■□□□□ 0.17
AC023509.3-201ENST00000448979 RBM46Q8TBY0 533 aaKnown RBP16.11■□□□□ 0.17
AC023509.3-201ENST00000448979 IBTKQ9P2D0 1353 aaPredicted RBP16.1■□□□□ 0.17
AC023509.3-201ENST00000448979 WDR90Q96KV7 1748 aa16.1■□□□□ 0.17
AC023509.3-201ENST00000448979 ALDH1B1P30837 517 aa16.1■□□□□ 0.17
AC023509.3-201ENST00000448979 HOXA10P31260 410 aaPredicted RBP16.1■□□□□ 0.17
AC023509.3-201ENST00000448979 EXOSC9Q06265 439 aaKnown RBP16.1■□□□□ 0.17
AC023509.3-201ENST00000448979 PARP10Q53GL7 1025 aa16.1■□□□□ 0.17
AC023509.3-201ENST00000448979 JARID2Q92833 1246 aaPredicted RBP16.1■□□□□ 0.17
AC023509.3-201ENST00000448979 ZC3H4Q9UPT8 1303 aaKnown RBP16.09■□□□□ 0.17
AC023509.3-201ENST00000448979 DDX60Q8IY21 1712 aaKnown RBP16.09■□□□□ 0.17
AC023509.3-201ENST00000448979 VEGFAP15692 232 aaPredicted RBP16.09■□□□□ 0.17
AC023509.3-201ENST00000448979 ANKRD13DQ6ZTN6 518 aa16.09■□□□□ 0.17
AC023509.3-201ENST00000448979 TRMT2AQ8IZ69 625 aaKnown RBP16.09■□□□□ 0.17
AC023509.3-201ENST00000448979 DBF4Q9UBU7 674 aaPredicted RBP16.09■□□□□ 0.17
AC023509.3-201ENST00000448979 TRMT112Q9UI30 125 aaKnown RBP16.09■□□□□ 0.17
AC023509.3-201ENST00000448979 ABCC4O15439 1325 aa16.08■□□□□ 0.17
AC023509.3-201ENST00000448979 PPEF1O14829 653 aaPredicted RBP16.08■□□□□ 0.16
AC023509.3-201ENST00000448979 SLC10A5Q5PT55 438 aa16.08■□□□□ 0.16
AC023509.3-201ENST00000448979 SOGA3Q5TF21 947 aa16.08■□□□□ 0.16
AC023509.3-201ENST00000448979 PLBD2Q8NHP8 589 aa16.08■□□□□ 0.16
AC023509.3-201ENST00000448979 FAM89AQ96GI7 184 aa16.08■□□□□ 0.16
AC023509.3-201ENST00000448979 RBM17Q96I25 401 aaKnown RBP16.08■□□□□ 0.16
AC023509.3-201ENST00000448979 NLRP3Q96P20 1036 aa16.08■□□□□ 0.16
AC023509.3-201ENST00000448979 RIC1Q4ADV7 1423 aa16.08■□□□□ 0.16
AC023509.3-201ENST00000448979 IARSP41252 1262 aaKnown RBP16.07■□□□□ 0.16
AC023509.3-201ENST00000448979 DPY19L2Q6NUT2 758 aa16.07■□□□□ 0.16
AC023509.3-201ENST00000448979 CRAMP1Q96RY5 1269 aa16.07■□□□□ 0.16
AC023509.3-201ENST00000448979 ISCA1Q9BUE6 129 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms