RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 C3orf67Q6ZVT6 689 aa20.42■□□□□ 0.86
TRA2A-203ENST00000448549 LRP10Q7Z4F1 713 aa20.42■□□□□ 0.86
TRA2A-203ENST00000448549 JDP2Q8WYK2 163 aa20.42■□□□□ 0.86
TRA2A-203ENST00000448549 IBTKQ9P2D0 1353 aaPredicted RBP20.42■□□□□ 0.86
TRA2A-203ENST00000448549 TCERG1O14776 1098 aaKnown RBP20.41■□□□□ 0.86
TRA2A-203ENST00000448549 ANXA1P04083 346 aa20.41■□□□□ 0.86
TRA2A-203ENST00000448549 EPHX2P34913 555 aa20.41■□□□□ 0.86
TRA2A-203ENST00000448549 TMPOP42166 694 aaKnown RBP20.41■□□□□ 0.86
TRA2A-203ENST00000448549 PROSER3Q2NL68 480 aa20.41■□□□□ 0.86
TRA2A-203ENST00000448549 SLC51AQ86UW1 340 aa20.41■□□□□ 0.86
TRA2A-203ENST00000448549 RBM17Q96I25 401 aaKnown RBP20.41■□□□□ 0.86
TRA2A-203ENST00000448549 CLEC11AQ9Y240 323 aa20.41■□□□□ 0.86
TRA2A-203ENST00000448549 RNF123Q5XPI4 1314 aa20.41■□□□□ 0.86
TRA2A-203ENST00000448549 PASKQ96RG2 1323 aa20.41■□□□□ 0.86
TRA2A-203ENST00000448549 SNED1Q8TER0 1413 aa20.41■□□□□ 0.86
TRA2A-203ENST00000448549 RIC1Q4ADV7 1423 aa20.4■□□□□ 0.86
TRA2A-203ENST00000448549 PARP10Q53GL7 1025 aa20.4■□□□□ 0.86
TRA2A-203ENST00000448549 PPP1R42Q7Z4L9 355 aa20.4■□□□□ 0.86
TRA2A-203ENST00000448549 GPC2Q8N158 579 aa20.4■□□□□ 0.86
TRA2A-203ENST00000448549 DLG5Q8TDM6 1919 aa20.4■□□□□ 0.86
TRA2A-203ENST00000448549 CRAMP1Q96RY5 1269 aa20.4■□□□□ 0.86
TRA2A-203ENST00000448549 ITGBL1O95965 494 aaPredicted RBP20.39■□□□□ 0.85
TRA2A-203ENST00000448549 BABAM1Q9NWV8 329 aa20.39■□□□□ 0.85
TRA2A-203ENST00000448549 PPEF1O14829 653 aaPredicted RBP20.38■□□□□ 0.85
TRA2A-203ENST00000448549 LMOD3Q0VAK6 560 aa20.38■□□□□ 0.85
TRA2A-203ENST00000448549 PNMA8AQ86V59 439 aaPredicted RBP20.38■□□□□ 0.85
TRA2A-203ENST00000448549 TNS4Q8IZW8 715 aa20.38■□□□□ 0.85
TRA2A-203ENST00000448549 NECTIN2Q92692 538 aa20.38■□□□□ 0.85
TRA2A-203ENST00000448549 NLRP3Q96P20 1036 aa20.38■□□□□ 0.85
TRA2A-203ENST00000448549 UTP14AQ9BVJ6 771 aaKnown RBP20.38■□□□□ 0.85
TRA2A-203ENST00000448549 EIF6P56537 245 aaKnown RBP20.37■□□□□ 0.85
TRA2A-203ENST00000448549 DDX10Q13206 875 aaKnown RBP20.37■□□□□ 0.85
TRA2A-203ENST00000448549 NEUROD2Q15784 382 aa20.37■□□□□ 0.85
TRA2A-203ENST00000448549 GRIPAP1Q4V328 841 aa20.37■□□□□ 0.85
TRA2A-203ENST00000448549 CCDC146Q8IYE0 955 aa20.37■□□□□ 0.85
TRA2A-203ENST00000448549 GJA3Q9Y6H8 435 aa20.37■□□□□ 0.85
TRA2A-203ENST00000448549 PCNTO95613 3336 aa20.37■□□□□ 0.85
TRA2A-203ENST00000448549 AIMP1Q12904 312 aaKnown RBP20.36■□□□□ 0.85
TRA2A-203ENST00000448549 SLC10A5Q5PT55 438 aa20.36■□□□□ 0.85
TRA2A-203ENST00000448549 COPS6Q7L5N1 327 aa20.36■□□□□ 0.85
TRA2A-203ENST00000448549 LARGE2Q8N3Y3 721 aa20.36■□□□□ 0.85
TRA2A-203ENST00000448549 TMEM88BA6NKF7 163 aa20.35■□□□□ 0.85
TRA2A-203ENST00000448549 MAP1SQ66K74 1059 aaPredicted RBP20.35■□□□□ 0.85
TRA2A-203ENST00000448549 XAGE3Q8WTP9 111 aa20.35■□□□□ 0.85
TRA2A-203ENST00000448549 COL4A5P29400 1685 aa20.35■□□□□ 0.85
TRA2A-203ENST00000448549 CNTNAP1P78357 1384 aa20.34■□□□□ 0.85
TRA2A-203ENST00000448549 MYBBP1AQ9BQG0 1328 aaKnown RBP20.34■□□□□ 0.85
TRA2A-203ENST00000448549 CAPN15O75808 1086 aa20.34■□□□□ 0.85
TRA2A-203ENST00000448549 KRT24Q2M2I5 525 aa20.34■□□□□ 0.85
TRA2A-203ENST00000448549 CNTROBQ8N137 903 aa20.34■□□□□ 0.85
TRA2A-203ENST00000448549 NUP98P52948 1817 aa20.34■□□□□ 0.85
TRA2A-203ENST00000448549 SCN4AP35499 1836 aa20.33■□□□□ 0.85
TRA2A-203ENST00000448549 CHL1O00533 1208 aa20.33■□□□□ 0.85
TRA2A-203ENST00000448549 NLRP10Q86W26 655 aa20.33■□□□□ 0.85
TRA2A-203ENST00000448549 TMX4Q9H1E5 349 aaPredicted RBP20.33■□□□□ 0.85
TRA2A-203ENST00000448549 ATP6V0A2Q9Y487 856 aa20.33■□□□□ 0.85
TRA2A-203ENST00000448549 LAS1LQ9Y4W2 734 aaKnown RBP20.33■□□□□ 0.85
TRA2A-203ENST00000448549 HCLS1P14317 486 aaPredicted RBP20.32■□□□□ 0.84
TRA2A-203ENST00000448549 LMOD1P29536 600 aaPredicted RBP20.32■□□□□ 0.84
TRA2A-203ENST00000448549 HSP90AB3PQ58FF7 597 aa20.32■□□□□ 0.84
TRA2A-203ENST00000448549 NIM1KQ8IY84 436 aa20.32■□□□□ 0.84
TRA2A-203ENST00000448549 TRIM35Q9UPQ4 493 aa20.32■□□□□ 0.84
TRA2A-203ENST00000448549 ABCC4O15439 1325 aa20.31■□□□□ 0.84
TRA2A-203ENST00000448549 PPIP5K2O43314 1243 aa20.31■□□□□ 0.84
TRA2A-203ENST00000448549 EPS15P42566 896 aa20.31■□□□□ 0.84
TRA2A-203ENST00000448549 VEGFBP49765 207 aa20.31■□□□□ 0.84
TRA2A-203ENST00000448549 SCNN1DP51172 638 aa20.31■□□□□ 0.84
TRA2A-203ENST00000448549 TCIRG1Q13488 830 aa20.31■□□□□ 0.84
TRA2A-203ENST00000448549 RUNDC1Q96C34 613 aa20.31■□□□□ 0.84
TRA2A-203ENST00000448549 DDX21Q9NR30 783 aaKnown RBP eCLIP20.31■□□□□ 0.84
TRA2A-203ENST00000448549 WDR43Q15061 677 aaKnown RBP eCLIP20.3■□□□□ 0.84
TRA2A-203ENST00000448549 AOC3Q16853 763 aa20.3■□□□□ 0.84
TRA2A-203ENST00000448549 ZNF428Q96B54 188 aa20.3■□□□□ 0.84
TRA2A-203ENST00000448549 TRMT112Q9UI30 125 aaKnown RBP20.3■□□□□ 0.84
TRA2A-203ENST00000448549 BBOX1O75936 387 aa20.29■□□□□ 0.84
TRA2A-203ENST00000448549 CHPF2Q9P2E5 772 aa20.29■□□□□ 0.84
TRA2A-203ENST00000448549 SP8Q8IXZ3 490 aa20.28■□□□□ 0.84
TRA2A-203ENST00000448549 ADAMTS8Q9UP79 889 aa20.28■□□□□ 0.84
TRA2A-203ENST00000448549 ADAMTSL1Q8N6G6 1762 aa20.28■□□□□ 0.84
TRA2A-203ENST00000448549 SH3TC1Q8TE82 1336 aa20.27■□□□□ 0.84
TRA2A-203ENST00000448549 FOXN1O15353 648 aa20.27■□□□□ 0.84
TRA2A-203ENST00000448549 HDGFL1Q5TGJ6 251 aa20.27■□□□□ 0.84
TRA2A-203ENST00000448549 DPP8Q6V1X1 898 aaPredicted RBP20.27■□□□□ 0.84
TRA2A-203ENST00000448549 DDX46Q7L014 1031 aaKnown RBP20.27■□□□□ 0.84
TRA2A-203ENST00000448549 SUPT20HQ8NEM7 779 aa20.27■□□□□ 0.84
TRA2A-203ENST00000448549 RTFDC1Q9BY42 306 aaPredicted RBP20.27■□□□□ 0.84
TRA2A-203ENST00000448549 VPS33BQ9H267 617 aa20.27■□□□□ 0.84
TRA2A-203ENST00000448549 DEFB115Q30KQ5 88 aa20.26■□□□□ 0.83
TRA2A-203ENST00000448549 USP50Q70EL3 339 aaPredicted RBP20.26■□□□□ 0.83
TRA2A-203ENST00000448549 MPNDQ8N594 471 aa20.26■□□□□ 0.83
TRA2A-203ENST00000448549 ZNRF3Q9ULT6 936 aa20.26■□□□□ 0.83
TRA2A-203ENST00000448549 RASSF10A6NK89 507 aa20.25■□□□□ 0.83
TRA2A-203ENST00000448549 FMR1Q06787 632 aaKnown RBP eCLIP20.25■□□□□ 0.83
TRA2A-203ENST00000448549 CXCL9Q07325 125 aa20.25■□□□□ 0.83
TRA2A-203ENST00000448549 ABT1Q9ULW3 272 aaKnown RBP20.25■□□□□ 0.83
TRA2A-203ENST00000448549 GRAPQ13588 217 aa20.24■□□□□ 0.83
TRA2A-203ENST00000448549 ANKRD13DQ6ZTN6 518 aa20.24■□□□□ 0.83
TRA2A-203ENST00000448549 PLBD2Q8NHP8 589 aa20.24■□□□□ 0.83
TRA2A-203ENST00000448549 GRAPLQ8TC17 118 aaPredicted RBP20.24■□□□□ 0.83
TRA2A-203ENST00000448549 GPRC5DQ9NZD1 345 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms