RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 BAG1Q99933 345 aaPredicted RBP12.51□□□□□ -0.41
LINC00342-202ENST00000448494 ANAPC4Q9UJX5 808 aa12.51□□□□□ -0.41
LINC00342-202ENST00000448494 CHUKO15111 745 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 CHMLP26374 656 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 CCT2P78371 535 aaKnown RBP12.5□□□□□ -0.41
LINC00342-202ENST00000448494 CCZ1BP86790 482 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 CCZ1P86791 482 aaPredicted RBP12.5□□□□□ -0.41
LINC00342-202ENST00000448494 KCNB2Q92953 911 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 CABS1Q96KC9 395 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 WDR7Q9Y4E6 1490 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 PHLPP2Q6ZVD8 1323 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 NRDCO43847 1150 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 TRIM27P14373 513 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 KCNJ6P48051 423 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 RPS6KA3P51812 740 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 SLC5A9Q2M3M2 681 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 LUZP1Q86V48 1076 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 ANKRD18AQ8IVF6 992 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 MRFAP1L1Q96HT8 127 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 TMX4Q9H1E5 349 aaPredicted RBP12.5□□□□□ -0.41
LINC00342-202ENST00000448494 CBX8Q9HC52 389 aa12.5□□□□□ -0.41
LINC00342-202ENST00000448494 GLI2P10070 1586 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 HECW2Q9P2P5 1572 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 A0A1B0GUA9 196 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 PSDA5PKW4 1024 aaPredicted RBP12.49□□□□□ -0.41
LINC00342-202ENST00000448494 SNUPNO95149 360 aaKnown RBP12.49□□□□□ -0.41
LINC00342-202ENST00000448494 CCNHP51946 323 aaPredicted RBP12.49□□□□□ -0.41
LINC00342-202ENST00000448494 TYRO3Q06418 890 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 APOBRQ0VD83 1088 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 SARM1Q6SZW1 724 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 TRMT1Q9NXH9 659 aaKnown RBP12.49□□□□□ -0.41
LINC00342-202ENST00000448494 TTC41PQ6P2S7 1318 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 ANKRD65E5RJM6 399 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 CAVIN2O95810 425 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 PKD2Q13563 968 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 CCDC27Q2M243 656 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 WLSQ5T9L3 541 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 ATF7IPQ6VMQ6 1270 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 CNPY2Q9Y2B0 182 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 AKAP2Q9Y2D5 859 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 ATP6V1DQ9Y5K8 247 aa12.49□□□□□ -0.41
LINC00342-202ENST00000448494 PRAG1Q86YV5 1406 aa12.48□□□□□ -0.41
LINC00342-202ENST00000448494 CCP110O43303 1012 aa12.48□□□□□ -0.41
LINC00342-202ENST00000448494 SETSIPP0DME0 302 aa12.48□□□□□ -0.41
LINC00342-202ENST00000448494 MAP3K11Q16584 847 aa12.48□□□□□ -0.41
LINC00342-202ENST00000448494 LRRFIP1Q32MZ4 808 aaKnown RBP12.48□□□□□ -0.41
LINC00342-202ENST00000448494 THUMPD2Q9BTF0 503 aaKnown RBP12.48□□□□□ -0.41
LINC00342-202ENST00000448494 SRCIN1Q9C0H9 1055 aa12.48□□□□□ -0.41
LINC00342-202ENST00000448494 ODF2LQ9ULJ1 636 aa12.48□□□□□ -0.41
LINC00342-202ENST00000448494 ABCC5O15440 1437 aa12.48□□□□□ -0.41
LINC00342-202ENST00000448494 IQSEC2Q5JU85 1478 aa12.48□□□□□ -0.41
LINC00342-202ENST00000448494 PRPHP41219 470 aa12.48□□□□□ -0.41
LINC00342-202ENST00000448494 BRD3Q15059 726 aa12.48□□□□□ -0.41
LINC00342-202ENST00000448494 ACBD3Q9H3P7 528 aa12.48□□□□□ -0.41
LINC00342-202ENST00000448494 DNAI1Q9UI46 699 aa12.48□□□□□ -0.41
LINC00342-202ENST00000448494 CCDC151A5D8V7 595 aa12.47□□□□□ -0.41
LINC00342-202ENST00000448494 CCDC69A6NI79 296 aa12.47□□□□□ -0.41
LINC00342-202ENST00000448494 ERC2O15083 957 aa12.47□□□□□ -0.41
LINC00342-202ENST00000448494 PPFIA2O75334 1257 aa12.47□□□□□ -0.41
LINC00342-202ENST00000448494 MAGEA8P43361 318 aa12.47□□□□□ -0.41
LINC00342-202ENST00000448494 LIG3P49916 1009 aa12.47□□□□□ -0.41
LINC00342-202ENST00000448494 FBXW10Q5XX13 1052 aa12.47□□□□□ -0.41
LINC00342-202ENST00000448494 DRAXINQ8NBI3 349 aaPredicted RBP12.47□□□□□ -0.41
LINC00342-202ENST00000448494 BICD2Q8TD16 824 aa12.47□□□□□ -0.41
LINC00342-202ENST00000448494 ZKSCAN4Q969J2 545 aaPredicted RBP12.47□□□□□ -0.41
LINC00342-202ENST00000448494 MAGI3Q5TCQ9 1506 aa12.47□□□□□ -0.41
LINC00342-202ENST00000448494 EXOC5O00471 708 aa12.47□□□□□ -0.41
LINC00342-202ENST00000448494 GSPT1P15170 499 aaKnown RBP12.47□□□□□ -0.41
LINC00342-202ENST00000448494 EVCP57679 992 aa12.47□□□□□ -0.41
LINC00342-202ENST00000448494 GSDMDP57764 484 aa12.47□□□□□ -0.41
LINC00342-202ENST00000448494 GNAI1P63096 354 aa12.47□□□□□ -0.41
LINC00342-202ENST00000448494 LONRF2Q1L5Z9 754 aa12.47□□□□□ -0.41
LINC00342-202ENST00000448494 MICAL1Q8TDZ2 1067 aa12.47□□□□□ -0.41
LINC00342-202ENST00000448494 ZNF526Q8TF50 670 aaPredicted RBP12.47□□□□□ -0.41
LINC00342-202ENST00000448494 THOC1Q96FV9 657 aaKnown RBP12.47□□□□□ -0.41
LINC00342-202ENST00000448494 RTL1A6NKG5 1358 aa12.46□□□□□ -0.41
LINC00342-202ENST00000448494 PECAM1P16284 738 aaPredicted RBP12.46□□□□□ -0.41
LINC00342-202ENST00000448494 TSHZ1Q6ZSZ6 1077 aa12.46□□□□□ -0.41
LINC00342-202ENST00000448494 TRIM74Q86UV6 250 aa12.46□□□□□ -0.41
LINC00342-202ENST00000448494 TRIM73Q86UV7 250 aa12.46□□□□□ -0.41
LINC00342-202ENST00000448494 FAM71BQ8TC56 605 aa12.46□□□□□ -0.41
LINC00342-202ENST00000448494 HNRNPLLQ8WVV9 542 aaKnown RBP12.46□□□□□ -0.41
LINC00342-202ENST00000448494 PPP1R13BQ96KQ4 1090 aa12.46□□□□□ -0.41
LINC00342-202ENST00000448494 KDM2AQ9Y2K7 1162 aa12.46□□□□□ -0.41
LINC00342-202ENST00000448494 IQGAP2Q13576 1575 aa12.46□□□□□ -0.41
LINC00342-202ENST00000448494 PTPRGP23470 1445 aa12.46□□□□□ -0.42
LINC00342-202ENST00000448494 DHX8Q14562 1220 aaKnown RBP12.45□□□□□ -0.42
LINC00342-202ENST00000448494 TBC1D25Q3MII6 688 aa12.45□□□□□ -0.42
LINC00342-202ENST00000448494 RABGGTAQ92696 567 aa12.45□□□□□ -0.42
LINC00342-202ENST00000448494 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC00342-202ENST00000448494 PPP6R1Q9UPN7 881 aa12.45□□□□□ -0.42
LINC00342-202ENST00000448494 TCHHQ07283 1943 aa12.45□□□□□ -0.42
LINC00342-202ENST00000448494 DISP1Q96F81 1524 aa12.45□□□□□ -0.42
LINC00342-202ENST00000448494 ATXN2Q99700 1313 aaKnown RBP12.45□□□□□ -0.42
LINC00342-202ENST00000448494 NEK4P51957 841 aa12.45□□□□□ -0.42
LINC00342-202ENST00000448494 ETF1P62495 437 aaKnown RBP12.45□□□□□ -0.42
LINC00342-202ENST00000448494 HDXQ7Z353 690 aa12.45□□□□□ -0.42
LINC00342-202ENST00000448494 IQCA1Q86XH1 822 aa12.45□□□□□ -0.42
LINC00342-202ENST00000448494 RPUSD2Q8IZ73 545 aaKnown RBP12.45□□□□□ -0.42
LINC00342-202ENST00000448494 ZSCAN22P10073 491 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms