RNA–Protein interactions for RNA: ENST00000446204.6

VPS8-210, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 4,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-210ENST00000446204 LINS1Q8NG48 757 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 CCDC85AQ96PX6 553 aaPredicted RBP9.33□□□□□ -0.92
VPS8-210ENST00000446204 BABAM1Q9NWV8 329 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 SNX14Q9Y5W7 946 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 PKP1Q13835 747 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 CEP135Q66GS9 1140 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 UNC13BO14795 1591 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 ZSCAN12O43309 604 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 CPA1P15085 419 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 STK11IPQ8N1F8 1099 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 NUP133Q8WUM0 1156 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 RAD50Q92878 1312 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 FAM177BA6PVY3 158 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 GOLGA8BA8MQT2 603 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 TMCO3Q6UWJ1 677 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 ANKRD13DQ6ZTN6 518 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 DNAJC25Q9H1X3 360 aa9.33□□□□□ -0.92
VPS8-210ENST00000446204 ZNF213O14771 459 aa9.32□□□□□ -0.92
VPS8-210ENST00000446204 HSPA4P34932 840 aa9.32□□□□□ -0.92
VPS8-210ENST00000446204 METTL24Q5JXM2 366 aa9.32□□□□□ -0.92
VPS8-210ENST00000446204 DDX46Q7L014 1031 aaKnown RBP9.32□□□□□ -0.92
VPS8-210ENST00000446204 AK7Q96M32 723 aa9.32□□□□□ -0.92
VPS8-210ENST00000446204 POLR1AO95602 1720 aaPredicted RBP9.32□□□□□ -0.92
VPS8-210ENST00000446204 CLASP1Q7Z460 1538 aa9.32□□□□□ -0.92
VPS8-210ENST00000446204 CCDC171Q6TFL3 1326 aa9.32□□□□□ -0.92
VPS8-210ENST00000446204 TOP1P11387 765 aaKnown RBP9.32□□□□□ -0.92
VPS8-210ENST00000446204 NOM1Q5C9Z4 860 aaKnown RBP9.32□□□□□ -0.92
VPS8-210ENST00000446204 CAGE1Q8TC20 777 aa9.32□□□□□ -0.92
VPS8-210ENST00000446204 AIDAQ96BJ3 306 aa9.32□□□□□ -0.92
VPS8-210ENST00000446204 SPDYE4A6NLX3 237 aa9.32□□□□□ -0.92
VPS8-210ENST00000446204 ATP5J2-PTCD1G3V325 749 aa9.32□□□□□ -0.92
VPS8-210ENST00000446204 PTCD1O75127 700 aaKnown RBP9.32□□□□□ -0.92
VPS8-210ENST00000446204 GADD45BO75293 160 aaPredicted RBP9.32□□□□□ -0.92
VPS8-210ENST00000446204 MCMDC2Q4G0Z9 681 aa9.32□□□□□ -0.92
VPS8-210ENST00000446204 Q6ZUG5 572 aa9.32□□□□□ -0.92
VPS8-210ENST00000446204 TMC6Q7Z403 805 aa9.32□□□□□ -0.92
VPS8-210ENST00000446204 ANKRD24Q8TF21 1146 aa9.32□□□□□ -0.92
VPS8-210ENST00000446204 USP16Q9Y5T5 823 aa9.32□□□□□ -0.92
VPS8-210ENST00000446204 CFAP65Q6ZU64 1925 aaKnown RBP9.32□□□□□ -0.92
VPS8-210ENST00000446204 BIN1O00499 593 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 URI1O94763 535 aaPredicted RBP9.31□□□□□ -0.92
VPS8-210ENST00000446204 TDO2P48775 406 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 RUFY1Q96T51 708 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 LRRC2Q9BYS8 371 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 STRN4Q9NRL3 753 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 ORC3Q9UBD5 711 aaPredicted RBP9.31□□□□□ -0.92
VPS8-210ENST00000446204 SBNO1A3KN83 1393 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 ERLIN1O75477 346 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 CLSTN1O94985 981 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 HOXC9P31274 260 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 MPHOSPH8Q99549 860 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 UBAC1Q9BSL1 405 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 MAGEC2Q9UBF1 373 aaPredicted RBP9.31□□□□□ -0.92
VPS8-210ENST00000446204 SKILP12757 684 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 PTGS1P23219 599 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 SNW1Q13573 536 aaKnown RBP9.31□□□□□ -0.92
VPS8-210ENST00000446204 CWF19L2Q2TBE0 894 aaKnown RBP9.31□□□□□ -0.92
VPS8-210ENST00000446204 SIRT2Q8IXJ6 389 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 GPT2Q8TD30 523 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 XAGE3Q8WTP9 111 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 JARID2Q92833 1246 aaPredicted RBP9.31□□□□□ -0.92
VPS8-210ENST00000446204 RBM33Q96EV2 1170 aaKnown RBP9.31□□□□□ -0.92
VPS8-210ENST00000446204 TMX4Q9H1E5 349 aaPredicted RBP9.31□□□□□ -0.92
VPS8-210ENST00000446204 CEP131Q9UPN4 1083 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 PPFIA3O75145 1194 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 POLR3DP05423 398 aaPredicted RBP9.31□□□□□ -0.92
VPS8-210ENST00000446204 SNRPA1P09661 255 aaKnown RBP9.31□□□□□ -0.92
VPS8-210ENST00000446204 TAF3Q5VWG9 929 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 COPS6Q7L5N1 327 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 PIBF1Q8WXW3 757 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 PRDM11Q9NQV5 511 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 SHROOM2Q13796 1616 aa9.31□□□□□ -0.92
VPS8-210ENST00000446204 ZNF500O60304 480 aaPredicted RBP9.3□□□□□ -0.92
VPS8-210ENST00000446204 ZNF853P0CG23 659 aa9.3□□□□□ -0.92
VPS8-210ENST00000446204 NAP1L1P55209 391 aaKnown RBP9.3□□□□□ -0.92
VPS8-210ENST00000446204 SETQ01105 290 aaPredicted RBP9.3□□□□□ -0.92
VPS8-210ENST00000446204 LEKR1Q6ZMV7 388 aa9.3□□□□□ -0.92
VPS8-210ENST00000446204 IFNL2Q8IZJ0 200 aa9.3□□□□□ -0.92
VPS8-210ENST00000446204 CCDC150Q8NCX0 1101 aa9.3□□□□□ -0.92
VPS8-210ENST00000446204 GNL3LQ9NVN8 582 aaKnown RBP9.3□□□□□ -0.92
VPS8-210ENST00000446204 SSH2Q76I76 1423 aa9.3□□□□□ -0.92
VPS8-210ENST00000446204 LUZP1Q86V48 1076 aa9.3□□□□□ -0.92
VPS8-210ENST00000446204 CCDC94Q9BW85 323 aaPredicted RBP9.3□□□□□ -0.92
VPS8-210ENST00000446204 IFIT5Q13325 482 aaKnown RBP9.3□□□□□ -0.92
VPS8-210ENST00000446204 CNNM3Q8NE01 707 aa9.3□□□□□ -0.92
VPS8-210ENST00000446204 IBTKQ9P2D0 1353 aaPredicted RBP9.3□□□□□ -0.92
VPS8-210ENST00000446204 EIF3JO75822 258 aaKnown RBP9.3□□□□□ -0.92
VPS8-210ENST00000446204 HOXB7P09629 217 aa9.3□□□□□ -0.92
VPS8-210ENST00000446204 MRPS27Q92552 414 aaKnown RBP9.3□□□□□ -0.92
VPS8-210ENST00000446204 OSBPL3Q9H4L5 887 aa9.3□□□□□ -0.92
VPS8-210ENST00000446204 ZNHIT6Q9NWK9 470 aaKnown RBP9.3□□□□□ -0.92
VPS8-210ENST00000446204 CWC25Q9NXE8 425 aaPredicted RBP9.3□□□□□ -0.92
VPS8-210ENST00000446204 PALD1Q9ULE6 856 aa9.3□□□□□ -0.92
VPS8-210ENST00000446204 AATKQ6ZMQ8 1374 aa9.3□□□□□ -0.92
VPS8-210ENST00000446204 TET3O43151 1660 aa9.29□□□□□ -0.92
VPS8-210ENST00000446204 G3V3G9 751 aa9.29□□□□□ -0.92
VPS8-210ENST00000446204 HAND2P61296 217 aa9.29□□□□□ -0.92
VPS8-210ENST00000446204 DCAF8Q5TAQ9 597 aa9.29□□□□□ -0.92
VPS8-210ENST00000446204 KCNG4Q8TDN1 519 aa9.29□□□□□ -0.92
VPS8-210ENST00000446204 MAP3K4Q9Y6R4 1608 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms