RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 TCERG1O14776 1098 aaKnown RBP24.24■■□□□ 1.47
HDAC4-203ENST00000445704 UTP14AQ9BVJ6 771 aaKnown RBP24.24■■□□□ 1.47
HDAC4-203ENST00000445704 ZNF521Q96K83 1311 aa24.24■■□□□ 1.47
HDAC4-203ENST00000445704 SBF1O95248 1867 aa24.24■■□□□ 1.47
HDAC4-203ENST00000445704 PRELPP51888 382 aa24.23■■□□□ 1.47
HDAC4-203ENST00000445704 CRY2Q49AN0 593 aa24.23■■□□□ 1.47
HDAC4-203ENST00000445704 C9orf131Q5VYM1 1079 aa24.23■■□□□ 1.47
HDAC4-203ENST00000445704 C3orf67Q6ZVT6 689 aa24.23■■□□□ 1.47
HDAC4-203ENST00000445704 ZNF428Q96B54 188 aa24.23■■□□□ 1.47
HDAC4-203ENST00000445704 NFKBIEO00221 500 aa24.22■■□□□ 1.47
HDAC4-203ENST00000445704 ISCA1Q9BUE6 129 aa24.22■■□□□ 1.47
HDAC4-203ENST00000445704 EXOSC9Q06265 439 aaKnown RBP24.21■■□□□ 1.47
HDAC4-203ENST00000445704 SYNE4Q8N205 404 aa24.21■■□□□ 1.47
HDAC4-203ENST00000445704 FER1L6Q2WGJ9 1857 aa24.21■■□□□ 1.47
HDAC4-203ENST00000445704 ATP5J2-PTCD1G3V325 749 aa24.2■■□□□ 1.46
HDAC4-203ENST00000445704 GOLGA2Q08379 1002 aa24.2■■□□□ 1.46
HDAC4-203ENST00000445704 ZNF526Q8TF50 670 aaPredicted RBP24.2■■□□□ 1.46
HDAC4-203ENST00000445704 C7orf43Q8WVR3 580 aa24.2■■□□□ 1.46
HDAC4-203ENST00000445704 CHMP4AQ9BY43 222 aa24.2■■□□□ 1.46
HDAC4-203ENST00000445704 RNF181Q9P0P0 153 aa24.2■■□□□ 1.46
HDAC4-203ENST00000445704 RNF123Q5XPI4 1314 aa24.19■■□□□ 1.46
HDAC4-203ENST00000445704 SLC10A5Q5PT55 438 aa24.19■■□□□ 1.46
HDAC4-203ENST00000445704 RIC3Q7Z5B4 369 aa24.19■■□□□ 1.46
HDAC4-203ENST00000445704 TRMT112Q9UI30 125 aaKnown RBP24.19■■□□□ 1.46
HDAC4-203ENST00000445704 LAMB2P55268 1798 aa24.19■■□□□ 1.46
HDAC4-203ENST00000445704 VAMP4O75379 141 aa24.18■■□□□ 1.46
HDAC4-203ENST00000445704 STK31Q9BXU1 1019 aa24.18■■□□□ 1.46
HDAC4-203ENST00000445704 OLFM4Q6UX06 510 aa24.17■■□□□ 1.46
HDAC4-203ENST00000445704 G2E3Q7L622 706 aa24.17■■□□□ 1.46
HDAC4-203ENST00000445704 MYH16Q9H6N6 1097 aa24.17■■□□□ 1.46
HDAC4-203ENST00000445704 SH3TC1Q8TE82 1336 aa24.16■■□□□ 1.46
HDAC4-203ENST00000445704 HCLS1P14317 486 aaPredicted RBP24.16■■□□□ 1.46
HDAC4-203ENST00000445704 HOXA10P31260 410 aaPredicted RBP24.16■■□□□ 1.46
HDAC4-203ENST00000445704 DIEXFQ68CQ4 756 aaKnown RBP24.16■■□□□ 1.46
HDAC4-203ENST00000445704 RPGRQ92834 1020 aaKnown RBP24.16■■□□□ 1.46
HDAC4-203ENST00000445704 DDX60Q8IY21 1712 aaKnown RBP24.15■■□□□ 1.46
HDAC4-203ENST00000445704 LMNB1P20700 586 aa24.15■■□□□ 1.46
HDAC4-203ENST00000445704 ALDH1B1P30837 517 aa24.15■■□□□ 1.46
HDAC4-203ENST00000445704 NLRP3Q96P20 1036 aa24.15■■□□□ 1.46
HDAC4-203ENST00000445704 MYD88Q99836 296 aa24.15■■□□□ 1.46
HDAC4-203ENST00000445704 GPBP1L1Q9HC44 474 aaPredicted RBP24.15■■□□□ 1.46
HDAC4-203ENST00000445704 SLC4A2P04920 1241 aa24.14■■□□□ 1.45
HDAC4-203ENST00000445704 TRIM28Q13263 835 aaKnown RBP24.14■■□□□ 1.45
HDAC4-203ENST00000445704 CCDC88AQ3V6T2 1871 aa24.14■■□□□ 1.45
HDAC4-203ENST00000445704 SLC51AQ86UW1 340 aa24.14■■□□□ 1.45
HDAC4-203ENST00000445704 TIAM2Q8IVF5 1701 aa24.14■■□□□ 1.45
HDAC4-203ENST00000445704 LTBP3Q9NS15 1303 aa24.13■■□□□ 1.45
HDAC4-203ENST00000445704 SNED1Q8TER0 1413 aa24.13■■□□□ 1.45
HDAC4-203ENST00000445704 DDX58O95786 925 aaKnown RBP24.13■■□□□ 1.45
HDAC4-203ENST00000445704 CCDC93Q567U6 631 aa24.13■■□□□ 1.45
HDAC4-203ENST00000445704 SOGA3Q5TF21 947 aa24.13■■□□□ 1.45
HDAC4-203ENST00000445704 MIER1Q8N108 512 aa24.13■■□□□ 1.45
HDAC4-203ENST00000445704 FAM89AQ96GI7 184 aa24.13■■□□□ 1.45
HDAC4-203ENST00000445704 METTL22Q9BUU2 404 aaPredicted RBP24.13■■□□□ 1.45
HDAC4-203ENST00000445704 MAP3K2Q9Y2U5 619 aa24.13■■□□□ 1.45
HDAC4-203ENST00000445704 PI4KAP2A4QPH2 592 aa24.12■■□□□ 1.45
HDAC4-203ENST00000445704 KSR2Q6VAB6 950 aa24.12■■□□□ 1.45
HDAC4-203ENST00000445704 PI4KAP1Q8N8J0 262 aa24.12■■□□□ 1.45
HDAC4-203ENST00000445704 RBM17Q96I25 401 aaKnown RBP24.12■■□□□ 1.45
HDAC4-203ENST00000445704 CRAMP1Q96RY5 1269 aa24.12■■□□□ 1.45
HDAC4-203ENST00000445704 TAOK3Q9H2K8 898 aa24.12■■□□□ 1.45
HDAC4-203ENST00000445704 RTL5Q5HYW3 569 aaPredicted RBP24.11■■□□□ 1.45
HDAC4-203ENST00000445704 ABCC4O15439 1325 aa24.1■■□□□ 1.45
HDAC4-203ENST00000445704 FLIIQ13045 1269 aa24.09■■□□□ 1.45
HDAC4-203ENST00000445704 DICER1Q9UPY3 1922 aaKnown RBP24.08■■□□□ 1.45
HDAC4-203ENST00000445704 PPEF1O14829 653 aaPredicted RBP24.08■■□□□ 1.45
HDAC4-203ENST00000445704 IGKV5-2P06315 115 aa24.08■■□□□ 1.45
HDAC4-203ENST00000445704 CCDC191Q8NCU4 936 aa24.08■■□□□ 1.45
HDAC4-203ENST00000445704 ZC3H4Q9UPT8 1303 aaKnown RBP24.08■■□□□ 1.44
HDAC4-203ENST00000445704 FKBP4Q02790 459 aaKnown RBP eCLIP24.07■■□□□ 1.44
HDAC4-203ENST00000445704 ZBTB38Q8NAP3 1195 aaPredicted RBP24.07■■□□□ 1.44
HDAC4-203ENST00000445704 CACNA1FO60840 1977 aa24.07■■□□□ 1.44
HDAC4-203ENST00000445704 E9PSI1 815 aa24.06■■□□□ 1.44
HDAC4-203ENST00000445704 IRS4O14654 1257 aaPredicted RBP24.06■■□□□ 1.44
HDAC4-203ENST00000445704 KIF3CO14782 793 aa24.06■■□□□ 1.44
HDAC4-203ENST00000445704 RTKN2Q8IZC4 609 aa24.06■■□□□ 1.44
HDAC4-203ENST00000445704 JARID2Q92833 1246 aaPredicted RBP24.06■■□□□ 1.44
HDAC4-203ENST00000445704 CDCA7LQ96GN5 454 aa24.06■■□□□ 1.44
HDAC4-203ENST00000445704 NMRK2Q9NPI5 230 aa24.06■■□□□ 1.44
HDAC4-203ENST00000445704 CWC25Q9NXE8 425 aaPredicted RBP24.06■■□□□ 1.44
HDAC4-203ENST00000445704 COL4A1P02462 1669 aa24.05■■□□□ 1.44
HDAC4-203ENST00000445704 TAF1P21675 1872 aa24.05■■□□□ 1.44
HDAC4-203ENST00000445704 SLFN5Q08AF3 891 aa24.05■■□□□ 1.44
HDAC4-203ENST00000445704 FKBP5Q13451 457 aaPredicted RBP24.05■■□□□ 1.44
HDAC4-203ENST00000445704 PCCAP05165 728 aaPredicted RBP24.04■■□□□ 1.44
HDAC4-203ENST00000445704 CWF19L2Q2TBE0 894 aaKnown RBP24.04■■□□□ 1.44
HDAC4-203ENST00000445704 ZNF277Q9NRM2 450 aaPredicted RBP24.04■■□□□ 1.44
HDAC4-203ENST00000445704 C1QTNF8P60827 252 aa24.03■■□□□ 1.44
HDAC4-203ENST00000445704 SF3B3Q15393 1217 aaKnown RBP24.03■■□□□ 1.44
HDAC4-203ENST00000445704 CC2D2BQ6DHV5 1058 aa24.03■■□□□ 1.44
HDAC4-203ENST00000445704 DDX46Q7L014 1031 aaKnown RBP24.03■■□□□ 1.44
HDAC4-203ENST00000445704 NEURL1BA8MQ27 555 aa24.02■■□□□ 1.44
HDAC4-203ENST00000445704 NEXNQ0ZGT2 675 aa24.02■■□□□ 1.44
HDAC4-203ENST00000445704 GRAPQ13588 217 aa24.02■■□□□ 1.44
HDAC4-203ENST00000445704 GRAPLQ8TC17 118 aaPredicted RBP24.02■■□□□ 1.44
HDAC4-203ENST00000445704 ATP6V0A2Q9Y487 856 aa24.02■■□□□ 1.44
HDAC4-203ENST00000445704 DNAAF4Q8WXU2 420 aa24.01■■□□□ 1.43
HDAC4-203ENST00000445704 PSMD1Q99460 953 aa24.01■■□□□ 1.43
HDAC4-203ENST00000445704 KDM2BQ8NHM5 1336 aa24.01■■□□□ 1.43
HDAC4-203ENST00000445704 COL4A5P29400 1685 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms