RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 VPS33BQ9H267 617 aa18.73■□□□□ 0.59
SHANK2-209ENST00000445654 SNED1Q8TER0 1413 aa18.73■□□□□ 0.59
SHANK2-209ENST00000445654 AOC2O75106 756 aa18.72■□□□□ 0.59
SHANK2-209ENST00000445654 CRY2Q49AN0 593 aa18.72■□□□□ 0.59
SHANK2-209ENST00000445654 TSKSQ9UJT2 592 aa18.72■□□□□ 0.59
SHANK2-209ENST00000445654 CELF2O95319 508 aaKnown RBP18.71■□□□□ 0.59
SHANK2-209ENST00000445654 HSPA5P11021 654 aaKnown RBP18.71■□□□□ 0.59
SHANK2-209ENST00000445654 USP16Q9Y5T5 823 aa18.71■□□□□ 0.59
SHANK2-209ENST00000445654 FAM177BA6PVY3 158 aa18.7■□□□□ 0.58
SHANK2-209ENST00000445654 TRAF5O00463 557 aa18.7■□□□□ 0.58
SHANK2-209ENST00000445654 NOGQ13253 232 aa18.7■□□□□ 0.58
SHANK2-209ENST00000445654 RIC1Q4ADV7 1423 aa18.7■□□□□ 0.58
SHANK2-209ENST00000445654 CDHR2Q9BYE9 1310 aa18.7■□□□□ 0.58
SHANK2-209ENST00000445654 U2SURPO15042 1029 aaKnown RBP18.69■□□□□ 0.58
SHANK2-209ENST00000445654 HOXA10P31260 410 aaPredicted RBP18.69■□□□□ 0.58
SHANK2-209ENST00000445654 FMR1Q06787 632 aaKnown RBP eCLIP18.69■□□□□ 0.58
SHANK2-209ENST00000445654 ZC3H15Q8WU90 426 aaKnown RBP18.69■□□□□ 0.58
SHANK2-209ENST00000445654 GPRC5DQ9NZD1 345 aa18.69■□□□□ 0.58
SHANK2-209ENST00000445654 KIF7Q2M1P5 1343 aa18.69■□□□□ 0.58
SHANK2-209ENST00000445654 CASP8AP2Q9UKL3 1982 aa18.68■□□□□ 0.58
SHANK2-209ENST00000445654 SUPT20HQ8NEM7 779 aa18.68■□□□□ 0.58
SHANK2-209ENST00000445654 RBM17Q96I25 401 aaKnown RBP18.68■□□□□ 0.58
SHANK2-209ENST00000445654 CLSPNQ9HAW4 1339 aa18.68■□□□□ 0.58
SHANK2-209ENST00000445654 TNRC18O15417 2968 aaPredicted RBP18.67■□□□□ 0.58
SHANK2-209ENST00000445654 CRAMP1Q96RY5 1269 aa18.67■□□□□ 0.58
SHANK2-209ENST00000445654 IBTKQ9P2D0 1353 aaPredicted RBP18.67■□□□□ 0.58
SHANK2-209ENST00000445654 PPIP5K2O43314 1243 aa18.66■□□□□ 0.58
SHANK2-209ENST00000445654 KCNQ3O43525 872 aa18.66■□□□□ 0.58
SHANK2-209ENST00000445654 PIP4K2AP48426 406 aaPredicted RBP18.66■□□□□ 0.58
SHANK2-209ENST00000445654 CIAPIN1Q6FI81 312 aa18.66■□□□□ 0.58
SHANK2-209ENST00000445654 CDC37L1Q7L3B6 337 aa18.66■□□□□ 0.58
SHANK2-209ENST00000445654 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
SHANK2-209ENST00000445654 PGAP2Q9UHJ9 254 aa18.66■□□□□ 0.58
SHANK2-209ENST00000445654 COL4A5P29400 1685 aa18.66■□□□□ 0.58
SHANK2-209ENST00000445654 ERVV-1B6SEH8 477 aa18.65■□□□□ 0.58
SHANK2-209ENST00000445654 PPEF1O14829 653 aaPredicted RBP18.65■□□□□ 0.58
SHANK2-209ENST00000445654 PRPF38BQ5VTL8 546 aaKnown RBP18.65■□□□□ 0.58
SHANK2-209ENST00000445654 SAGE1Q9NXZ1 904 aa18.65■□□□□ 0.58
SHANK2-209ENST00000445654 ZNRF3Q9ULT6 936 aa18.64■□□□□ 0.57
SHANK2-209ENST00000445654 NPC1L1Q9UHC9 1359 aa18.64■□□□□ 0.57
SHANK2-209ENST00000445654 NBPF26B4DH59 902 aa18.63■□□□□ 0.57
SHANK2-209ENST00000445654 HLFQ16534 295 aa18.63■□□□□ 0.57
SHANK2-209ENST00000445654 NBPF10Q6P3W6 841 aaKnown RBP18.63■□□□□ 0.57
SHANK2-209ENST00000445654 NBPF15Q8N660 670 aa18.63■□□□□ 0.57
SHANK2-209ENST00000445654 PDE4DIPQ5VU43 2346 aa18.63■□□□□ 0.57
SHANK2-209ENST00000445654 TNIP1Q15025 636 aa18.62■□□□□ 0.57
SHANK2-209ENST00000445654 BCL2L13Q9BXK5 485 aa18.62■□□□□ 0.57
SHANK2-209ENST00000445654 GLIS2Q9BZE0 524 aaPredicted RBP18.62■□□□□ 0.57
SHANK2-209ENST00000445654 ZNF408Q9H9D4 720 aa18.62■□□□□ 0.57
SHANK2-209ENST00000445654 ABCC12Q96J65 1359 aa18.62■□□□□ 0.57
SHANK2-209ENST00000445654 COL3A1P02461 1466 aaPredicted RBP18.62■□□□□ 0.57
SHANK2-209ENST00000445654 KIF6Q6ZMV9 814 aa18.61■□□□□ 0.57
SHANK2-209ENST00000445654 NUTM1Q86Y26 1132 aa18.61■□□□□ 0.57
SHANK2-209ENST00000445654 LAMB4A4D0S4 1761 aa18.6■□□□□ 0.57
SHANK2-209ENST00000445654 MAP3K15Q6ZN16 1313 aa18.6■□□□□ 0.57
SHANK2-209ENST00000445654 PRAMEF22A3QJZ6 481 aa18.6■□□□□ 0.57
SHANK2-209ENST00000445654 GMPSP49915 693 aaPredicted RBP18.6■□□□□ 0.57
SHANK2-209ENST00000445654 HUNKP57058 714 aa18.6■□□□□ 0.57
SHANK2-209ENST00000445654 CXCL9Q07325 125 aa18.6■□□□□ 0.57
SHANK2-209ENST00000445654 AOC3Q16853 763 aa18.6■□□□□ 0.57
SHANK2-209ENST00000445654 CCDC102AQ96A19 550 aa18.6■□□□□ 0.57
SHANK2-209ENST00000445654 NUP98P52948 1817 aa18.59■□□□□ 0.57
SHANK2-209ENST00000445654 HTATSF1O43719 755 aaKnown RBP18.59■□□□□ 0.57
SHANK2-209ENST00000445654 CFAP53Q96M91 514 aa18.59■□□□□ 0.57
SHANK2-209ENST00000445654 NLRP3Q96P20 1036 aa18.59■□□□□ 0.57
SHANK2-209ENST00000445654 ATP6V0A2Q9Y487 856 aa18.59■□□□□ 0.57
SHANK2-209ENST00000445654 H7C1D1 291 aa18.58■□□□□ 0.56
SHANK2-209ENST00000445654 PRKAR2BP31323 418 aa18.58■□□□□ 0.56
SHANK2-209ENST00000445654 CC2D1BQ5T0F9 858 aaKnown RBP18.58■□□□□ 0.56
SHANK2-209ENST00000445654 PPP1R42Q7Z4L9 355 aa18.58■□□□□ 0.56
SHANK2-209ENST00000445654 RTFDC1Q9BY42 306 aaPredicted RBP18.58■□□□□ 0.56
SHANK2-209ENST00000445654 NUDCQ9Y266 331 aa18.58■□□□□ 0.56
SHANK2-209ENST00000445654 TCERG1O14776 1098 aaKnown RBP18.57■□□□□ 0.56
SHANK2-209ENST00000445654 SOX10P56693 466 aa18.57■□□□□ 0.56
SHANK2-209ENST00000445654 RGMBQ6NW40 437 aa18.57■□□□□ 0.56
SHANK2-209ENST00000445654 REM2Q8IYK8 340 aaPredicted RBP18.57■□□□□ 0.56
SHANK2-209ENST00000445654 C2orf69Q8N8R5 385 aa18.57■□□□□ 0.56
SHANK2-209ENST00000445654 TAF7Q15545 349 aaPredicted RBP18.56■□□□□ 0.56
SHANK2-209ENST00000445654 PARP10Q53GL7 1025 aa18.56■□□□□ 0.56
SHANK2-209ENST00000445654 DPP8Q6V1X1 898 aaPredicted RBP18.56■□□□□ 0.56
SHANK2-209ENST00000445654 GCC1Q96CN9 775 aa18.56■□□□□ 0.56
SHANK2-209ENST00000445654 PHACTR3Q96KR7 559 aa18.56■□□□□ 0.56
SHANK2-209ENST00000445654 RSPH6AQ9H0K4 717 aa18.56■□□□□ 0.56
SHANK2-209ENST00000445654 PER1O15534 1290 aaPredicted RBP18.55■□□□□ 0.56
SHANK2-209ENST00000445654 BBOX1O75936 387 aa18.55■□□□□ 0.56
SHANK2-209ENST00000445654 KIAA2012Q0VF49 1180 aa18.55■□□□□ 0.56
SHANK2-209ENST00000445654 PNISRQ8TF01 805 aaKnown RBP18.55■□□□□ 0.56
SHANK2-209ENST00000445654 GPTP24298 496 aa18.54■□□□□ 0.56
SHANK2-209ENST00000445654 MCM10Q7L590 875 aa18.54■□□□□ 0.56
SHANK2-209ENST00000445654 CTU1Q7Z7A3 348 aaKnown RBP18.54■□□□□ 0.56
SHANK2-209ENST00000445654 MPNDQ8N594 471 aa18.54■□□□□ 0.56
SHANK2-209ENST00000445654 CNOT7Q9UIV1 285 aaKnown RBP18.54■□□□□ 0.56
SHANK2-209ENST00000445654 AKAP11Q9UKA4 1901 aa18.53■□□□□ 0.56
SHANK2-209ENST00000445654 NTSR2O95665 410 aa18.53■□□□□ 0.56
SHANK2-209ENST00000445654 SUSD4Q5VX71 490 aa18.53■□□□□ 0.56
SHANK2-209ENST00000445654 USP48Q86UV5 1035 aa18.53■□□□□ 0.56
SHANK2-209ENST00000445654 SP8Q8IXZ3 490 aa18.53■□□□□ 0.56
SHANK2-209ENST00000445654 NGEFQ8N5V2 710 aa18.53■□□□□ 0.56
SHANK2-209ENST00000445654 DPF2Q92785 391 aa18.53■□□□□ 0.56
SHANK2-209ENST00000445654 GBA2Q9HCG7 927 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms