RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 CCDC102AQ96A19 550 aa9.3□□□□□ -0.92
RIF1-205ENST00000444746 FAM173BQ6P4H8 233 aa9.3□□□□□ -0.92
RIF1-205ENST00000444746 NIP7Q9Y221 180 aaKnown RBP eCLIP9.3□□□□□ -0.92
RIF1-205ENST00000444746 STIM1Q13586 685 aa9.3□□□□□ -0.92
RIF1-205ENST00000444746 PTPRCP08575 1304 aa9.3□□□□□ -0.92
RIF1-205ENST00000444746 METAP2P50579 478 aaKnown RBP eCLIP9.3□□□□□ -0.92
RIF1-205ENST00000444746 CTCFLQ8NI51 663 aaPredicted RBP9.3□□□□□ -0.92
RIF1-205ENST00000444746 ESYT1Q9BSJ8 1104 aa9.3□□□□□ -0.92
RIF1-205ENST00000444746 TSPYL1Q9H0U9 437 aa9.3□□□□□ -0.92
RIF1-205ENST00000444746 BICC1Q9H694 974 aaKnown RBP9.3□□□□□ -0.92
RIF1-205ENST00000444746 ZNF652Q9Y2D9 606 aa9.3□□□□□ -0.92
RIF1-205ENST00000444746 SIRT1Q96EB6 747 aa9.3□□□□□ -0.92
RIF1-205ENST00000444746 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.3□□□□□ -0.92
RIF1-205ENST00000444746 V9GYY5 206 aaPredicted RBP9.3□□□□□ -0.92
RIF1-205ENST00000444746 POLR3GO15318 223 aaPredicted RBP9.3□□□□□ -0.92
RIF1-205ENST00000444746 NEFHP12036 1026 aa9.3□□□□□ -0.92
RIF1-205ENST00000444746 NBPF6Q5VWK0 638 aa9.3□□□□□ -0.92
RIF1-205ENST00000444746 CEP85Q6P2H3 762 aa9.3□□□□□ -0.92
RIF1-205ENST00000444746 NBPF5PQ86XG9 351 aaPredicted RBP9.3□□□□□ -0.92
RIF1-205ENST00000444746 TTC16Q8NEE8 873 aa9.3□□□□□ -0.92
RIF1-205ENST00000444746 NBPF4Q96M43 638 aa9.3□□□□□ -0.92
RIF1-205ENST00000444746 SYCP2Q9BX26 1530 aa9.3□□□□□ -0.92
RIF1-205ENST00000444746 EPB41L2O43491 1005 aaKnown RBP9.29□□□□□ -0.92
RIF1-205ENST00000444746 KCNQ3O43525 872 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 TIMM10P62072 90 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 OTUD7BQ6GQQ9 843 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 SAP30BPQ9UHR5 308 aaKnown RBP9.29□□□□□ -0.92
RIF1-205ENST00000444746 DACH1Q9UI36 760 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 PIK3R4Q99570 1358 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 KDM5BQ9UGL1 1544 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 IARSP41252 1262 aaKnown RBP9.29□□□□□ -0.92
RIF1-205ENST00000444746 SLC9C2Q5TAH2 1124 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 SCLT1Q96NL6 688 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 STX8Q9UNK0 236 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 A0A1W2PP64 1363 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.29□□□□□ -0.92
RIF1-205ENST00000444746 ABCC11Q96J66 1382 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 HOXC9P31274 260 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 ATP8B2P98198 1209 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 BMP2KLQ5H9B9 411 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 CHAMP1Q96JM3 812 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 CIZ1Q9ULV3 898 aaPredicted RBP9.29□□□□□ -0.92
RIF1-205ENST00000444746 PPARDQ03181 441 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 FAM89AQ96GI7 184 aa9.29□□□□□ -0.92
RIF1-205ENST00000444746 H0YHG0 523 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 PRKCSHP14314 528 aaPredicted RBP9.28□□□□□ -0.92
RIF1-205ENST00000444746 ASXL2Q76L83 1435 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 MFSD6Q6ZSS7 791 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 PLS1Q14651 629 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 CBFA2T2O43439 604 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 EDC3Q96F86 508 aaKnown RBP9.28□□□□□ -0.92
RIF1-205ENST00000444746 CCDC194A0A1B0GVG4 234 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 A1BGP04217 495 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 AK2P54819 239 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 NUP88Q99567 741 aaPredicted RBP9.28□□□□□ -0.92
RIF1-205ENST00000444746 DNAJC25Q9H1X3 360 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 TMOD2Q9NZR1 351 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 RIMS2Q9UQ26 1411 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 MSH6P52701 1360 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 UBAP1LF5GYI3 381 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 TOP1P11387 765 aaKnown RBP9.28□□□□□ -0.92
RIF1-205ENST00000444746 EIF6P56537 245 aaKnown RBP9.28□□□□□ -0.92
RIF1-205ENST00000444746 ARHGAP29Q52LW3 1261 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 AKNAD1Q5T1N1 836 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 DZIP3Q86Y13 1208 aaKnown RBP9.28□□□□□ -0.92
RIF1-205ENST00000444746 ANKRD44Q8N8A2 993 aa9.28□□□□□ -0.92
RIF1-205ENST00000444746 NUP153P49790 1475 aaKnown RBP9.27□□□□□ -0.92
RIF1-205ENST00000444746 STX17P56962 302 aa9.27□□□□□ -0.92
RIF1-205ENST00000444746 HEATR3Q7Z4Q2 680 aa9.27□□□□□ -0.92
RIF1-205ENST00000444746 IQCA1Q86XH1 822 aa9.27□□□□□ -0.92
RIF1-205ENST00000444746 SRRTQ9BXP5 876 aaKnown RBP9.27□□□□□ -0.92
RIF1-205ENST00000444746 GRM8O00222 908 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 USP8P40818 1118 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 SPECC1Q5M775 1068 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 WASF1Q92558 559 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 KAT14Q9H8E8 782 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 BMP2KQ9NSY1 1161 aaPredicted RBP9.27□□□□□ -0.93
RIF1-205ENST00000444746 TAF5LO75529 589 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 CCDC113Q9H0I3 377 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 MAP3K19Q56UN5 1328 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 ATP2B3Q16720 1220 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 TDRD12Q587J7 1177 aaKnown RBP9.27□□□□□ -0.93
RIF1-205ENST00000444746 ANKRD36BQ8N2N9 1353 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 SMTNL1A8MU46 457 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 TCERG1LQ5VWI1 586 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 CATIPQ7Z7H3 387 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 MAGEB6Q8N7X4 407 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 ACBD3Q9H3P7 528 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 DRC1Q96MC2 740 aa9.27□□□□□ -0.93
RIF1-205ENST00000444746 ERCC3P19447 782 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 ANO6Q4KMQ2 910 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 ZSCAN30Q86W11 494 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 NCOA7Q8NI08 942 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 ALG1Q9BT22 464 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 ANO10Q9NW15 660 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 MACROD2A1Z1Q3 448 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 GCP02774 474 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 CCDC178Q5BJE1 867 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 AKAP4Q5JQC9 854 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 MYL10Q9BUA6 226 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms