RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 K7ELQ4 463 aaPredicted RBP19.08■□□□□ 0.65
SNX13-204ENST00000444712 CYP19A1P11511 503 aaPredicted RBP19.08■□□□□ 0.65
SNX13-204ENST00000444712 PRIM1P49642 420 aaKnown RBP19.08■□□□□ 0.65
SNX13-204ENST00000444712 PTPN12Q05209 780 aaKnown RBP19.08■□□□□ 0.65
SNX13-204ENST00000444712 NFKBIBQ15653 356 aa19.08■□□□□ 0.65
SNX13-204ENST00000444712 UNC5CLQ8IV45 518 aa19.08■□□□□ 0.65
SNX13-204ENST00000444712 SIL1Q9H173 461 aa19.08■□□□□ 0.65
SNX13-204ENST00000444712 CCDC9Q9Y3X0 531 aaKnown RBP19.08■□□□□ 0.65
SNX13-204ENST00000444712 ANAPC15P60006 121 aa19.08■□□□□ 0.64
SNX13-204ENST00000444712 RUFY2Q8WXA3 655 aa19.08■□□□□ 0.64
SNX13-204ENST00000444712 NUP98P52948 1817 aa19.08■□□□□ 0.64
SNX13-204ENST00000444712 ZNF831Q5JPB2 1677 aa19.08■□□□□ 0.64
SNX13-204ENST00000444712 RREB1Q92766 1687 aa19.08■□□□□ 0.64
SNX13-204ENST00000444712 ST18O60284 1047 aa19.07■□□□□ 0.64
SNX13-204ENST00000444712 FOXO4P98177 505 aa19.07■□□□□ 0.64
SNX13-204ENST00000444712 LMBR1LQ6UX01 489 aa19.07■□□□□ 0.64
SNX13-204ENST00000444712 EVI5LQ96CN4 794 aa19.07■□□□□ 0.64
SNX13-204ENST00000444712 HIP1O00291 1037 aa19.07■□□□□ 0.64
SNX13-204ENST00000444712 GIGYF2Q6Y7W6 1299 aaKnown RBP19.07■□□□□ 0.64
SNX13-204ENST00000444712 EAF2Q96CJ1 260 aaPredicted RBP19.07■□□□□ 0.64
SNX13-204ENST00000444712 CHMP5Q9NZZ3 219 aa19.07■□□□□ 0.64
SNX13-204ENST00000444712 ZNF330Q9Y3S2 320 aaPredicted RBP19.07■□□□□ 0.64
SNX13-204ENST00000444712 IL6STP40189 918 aaPredicted RBP19.06■□□□□ 0.64
SNX13-204ENST00000444712 ANO2Q9NQ90 1003 aa19.06■□□□□ 0.64
SNX13-204ENST00000444712 MYH3P11055 1940 aa19.06■□□□□ 0.64
SNX13-204ENST00000444712 JARID2Q92833 1246 aaPredicted RBP19.05■□□□□ 0.64
SNX13-204ENST00000444712 PCCAP05165 728 aaPredicted RBP19.05■□□□□ 0.64
SNX13-204ENST00000444712 CIZ1Q9ULV3 898 aaPredicted RBP19.05■□□□□ 0.64
SNX13-204ENST00000444712 ERVV-1B6SEH8 477 aa19.04■□□□□ 0.64
SNX13-204ENST00000444712 HSP90AA1P07900 732 aaKnown RBP19.04■□□□□ 0.64
SNX13-204ENST00000444712 VPS72Q15906 364 aa19.04■□□□□ 0.64
SNX13-204ENST00000444712 MARCH10Q8NA82 808 aaPredicted RBP19.04■□□□□ 0.64
SNX13-204ENST00000444712 KLHDC4Q8TBB5 520 aa19.04■□□□□ 0.64
SNX13-204ENST00000444712 PLA2G12BQ9BX93 195 aa19.04■□□□□ 0.64
SNX13-204ENST00000444712 DIAPH3Q9NSV4 1193 aa19.04■□□□□ 0.64
SNX13-204ENST00000444712 FBXO3Q9UK99 471 aa19.04■□□□□ 0.64
SNX13-204ENST00000444712 CHMP3Q9Y3E7 222 aa19.04■□□□□ 0.64
SNX13-204ENST00000444712 SPATA31A6Q5VVP1 1343 aa19.04■□□□□ 0.64
SNX13-204ENST00000444712 SGSM2O43147 1006 aa19.03■□□□□ 0.64
SNX13-204ENST00000444712 TNNI3KQ59H18 835 aa19.03■□□□□ 0.64
SNX13-204ENST00000444712 SMARCC1Q92922 1105 aaPredicted RBP19.03■□□□□ 0.64
SNX13-204ENST00000444712 IL17RAQ96F46 866 aa19.03■□□□□ 0.64
SNX13-204ENST00000444712 SLC4A9Q96Q91 983 aa19.03■□□□□ 0.64
SNX13-204ENST00000444712 GPR108Q9NPR9 543 aa19.03■□□□□ 0.64
SNX13-204ENST00000444712 FPGT-TNNI3KV9GXZ4 949 aa19.03■□□□□ 0.64
SNX13-204ENST00000444712 CDHR2Q9BYE9 1310 aa19.03■□□□□ 0.64
SNX13-204ENST00000444712 MAP4K4O95819 1239 aaPredicted RBP19.03■□□□□ 0.64
SNX13-204ENST00000444712 ZBTB38Q8NAP3 1195 aaPredicted RBP19.03■□□□□ 0.64
SNX13-204ENST00000444712 CCDC8Q9H0W5 538 aaPredicted RBP19.03■□□□□ 0.64
SNX13-204ENST00000444712 CIAO1O76071 339 aa19.02■□□□□ 0.64
SNX13-204ENST00000444712 IL15P40933 162 aaPredicted RBP19.02■□□□□ 0.64
SNX13-204ENST00000444712 KIAA1211Q6ZU35 1233 aa19.02■□□□□ 0.64
SNX13-204ENST00000444712 MCM2P49736 904 aa19.01■□□□□ 0.63
SNX13-204ENST00000444712 NGLY1Q96IV0 654 aa19.01■□□□□ 0.63
SNX13-204ENST00000444712 ZBTB1Q9Y2K1 713 aa19.01■□□□□ 0.63
SNX13-204ENST00000444712 TFCP2Q12800 502 aa19.01■□□□□ 0.63
SNX13-204ENST00000444712 RAD50Q92878 1312 aa19.01■□□□□ 0.63
SNX13-204ENST00000444712 COL5A3P25940 1745 aaPredicted RBP19.01■□□□□ 0.63
SNX13-204ENST00000444712 BCL9LQ86UU0 1499 aa19.01■□□□□ 0.63
SNX13-204ENST00000444712 RFX7Q2KHR2 1363 aa19■□□□□ 0.63
SNX13-204ENST00000444712 ATP5JP18859 108 aa19■□□□□ 0.63
SNX13-204ENST00000444712 SPRYD3Q8NCJ5 442 aa19■□□□□ 0.63
SNX13-204ENST00000444712 ARXQ96QS3 562 aa19■□□□□ 0.63
SNX13-204ENST00000444712 C8orf37Q96NL8 207 aa19■□□□□ 0.63
SNX13-204ENST00000444712 EYA2O00167 538 aa18.99■□□□□ 0.63
SNX13-204ENST00000444712 CD2BP2O95400 341 aaKnown RBP18.99■□□□□ 0.63
SNX13-204ENST00000444712 CCDC57Q2TAC2 916 aa18.99■□□□□ 0.63
SNX13-204ENST00000444712 DZIP3Q86Y13 1208 aaKnown RBP18.99■□□□□ 0.63
SNX13-204ENST00000444712 FNBP4Q8N3X1 1017 aaPredicted RBP18.99■□□□□ 0.63
SNX13-204ENST00000444712 CCDC87Q9NVE4 849 aa18.99■□□□□ 0.63
SNX13-204ENST00000444712 SPEF2Q9C093 1822 aa18.99■□□□□ 0.63
SNX13-204ENST00000444712 HSPA4P34932 840 aa18.98■□□□□ 0.63
SNX13-204ENST00000444712 DDIT3P35638 169 aa18.98■□□□□ 0.63
SNX13-204ENST00000444712 ATP6V1AP38606 617 aa18.98■□□□□ 0.63
SNX13-204ENST00000444712 PALLDQ8WX93 1383 aa18.98■□□□□ 0.63
SNX13-204ENST00000444712 LOC102724428A0A0B4J2F2 783 aa18.98■□□□□ 0.63
SNX13-204ENST00000444712 A0A0G2JS52 829 aa18.98■□□□□ 0.63
SNX13-204ENST00000444712 SIK1P57059 783 aa18.98■□□□□ 0.63
SNX13-204ENST00000444712 CWC27Q6UX04 472 aaKnown RBP18.98■□□□□ 0.63
SNX13-204ENST00000444712 NLRP10Q86W26 655 aa18.98■□□□□ 0.63
SNX13-204ENST00000444712 TICAM2Q86XR7 235 aa18.98■□□□□ 0.63
SNX13-204ENST00000444712 ACSBG1Q96GR2 724 aa18.98■□□□□ 0.63
SNX13-204ENST00000444712 TLR7Q9NYK1 1049 aaKnown RBP18.98■□□□□ 0.63
SNX13-204ENST00000444712 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.98■□□□□ 0.63
SNX13-204ENST00000444712 DBNLQ9UJU6 430 aaKnown RBP18.97■□□□□ 0.63
SNX13-204ENST00000444712 THSD7AQ9UPZ6 1657 aa18.96■□□□□ 0.63
SNX13-204ENST00000444712 EIF5P55010 431 aaKnown RBP18.96■□□□□ 0.63
SNX13-204ENST00000444712 ATG9AQ7Z3C6 839 aa18.96■□□□□ 0.63
SNX13-204ENST00000444712 BOLA2Q9H3K6 86 aa18.96■□□□□ 0.63
SNX13-204ENST00000444712 FRAT2O75474 233 aaPredicted RBP18.96■□□□□ 0.63
SNX13-204ENST00000444712 CSF1RP07333 972 aa18.96■□□□□ 0.63
SNX13-204ENST00000444712 HLFQ16534 295 aa18.96■□□□□ 0.63
SNX13-204ENST00000444712 FAM98CQ17RN3 349 aaKnown RBP18.96■□□□□ 0.63
SNX13-204ENST00000444712 FSD1Q9BTV5 496 aa18.96■□□□□ 0.63
SNX13-204ENST00000444712 LSG1Q9H089 658 aaKnown RBP18.96■□□□□ 0.63
SNX13-204ENST00000444712 ZNF609O15014 1411 aa18.96■□□□□ 0.63
SNX13-204ENST00000444712 BCORQ6W2J9 1755 aa18.95■□□□□ 0.62
SNX13-204ENST00000444712 AK7Q96M32 723 aa18.95■□□□□ 0.62
SNX13-204ENST00000444712 CRKLP46109 303 aaKnown RBP18.95■□□□□ 0.62
SNX13-204ENST00000444712 IFIT5Q13325 482 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms