RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 SYTL4Q96C24 671 aaPredicted RBP10.53□□□□□ -0.72
RER1-205ENST00000443438 USP26Q9BXU7 913 aa10.53□□□□□ -0.72
RER1-205ENST00000443438 TBC1D2Q9BYX2 928 aa10.53□□□□□ -0.72
RER1-205ENST00000443438 ZBTB1Q9Y2K1 713 aa10.53□□□□□ -0.72
RER1-205ENST00000443438 CCDC9Q9Y3X0 531 aaKnown RBP10.53□□□□□ -0.72
RER1-205ENST00000443438 CICQ96RK0 1608 aaPredicted RBP10.53□□□□□ -0.72
RER1-205ENST00000443438 MAP3K15Q6ZN16 1313 aa10.53□□□□□ -0.72
RER1-205ENST00000443438 KCNQ2O43526 872 aa10.52□□□□□ -0.73
RER1-205ENST00000443438 CHMLP26374 656 aa10.52□□□□□ -0.73
RER1-205ENST00000443438 IL6STP40189 918 aaPredicted RBP10.52□□□□□ -0.73
RER1-205ENST00000443438 EIF5P55010 431 aaKnown RBP10.52□□□□□ -0.73
RER1-205ENST00000443438 G3BP1Q13283 466 aaKnown RBP eCLIP10.52□□□□□ -0.73
RER1-205ENST00000443438 ITPK1Q13572 414 aa10.52□□□□□ -0.73
RER1-205ENST00000443438 HLFQ16534 295 aa10.52□□□□□ -0.73
RER1-205ENST00000443438 GIGYF2Q6Y7W6 1299 aaKnown RBP10.52□□□□□ -0.73
RER1-205ENST00000443438 ERICH6Q7L0X2 663 aa10.52□□□□□ -0.73
RER1-205ENST00000443438 EAF2Q96CJ1 260 aaPredicted RBP10.52□□□□□ -0.73
RER1-205ENST00000443438 RREB1Q92766 1687 aa10.52□□□□□ -0.73
RER1-205ENST00000443438 TTC41PQ6P2S7 1318 aa10.52□□□□□ -0.73
RER1-205ENST00000443438 THSD7AQ9UPZ6 1657 aa10.51□□□□□ -0.73
RER1-205ENST00000443438 EIF5BO60841 1220 aaKnown RBP10.51□□□□□ -0.73
RER1-205ENST00000443438 OS9Q13438 667 aaPredicted RBP10.51□□□□□ -0.73
RER1-205ENST00000443438 LMBR1LQ6UX01 489 aa10.51□□□□□ -0.73
RER1-205ENST00000443438 KIF6Q6ZMV9 814 aa10.51□□□□□ -0.73
RER1-205ENST00000443438 CLASRPQ8N2M8 674 aaKnown RBP10.51□□□□□ -0.73
RER1-205ENST00000443438 PLA2G12BQ9BX93 195 aa10.51□□□□□ -0.73
RER1-205ENST00000443438 USP21Q9UK80 565 aa10.51□□□□□ -0.73
RER1-205ENST00000443438 LOC102724428A0A0B4J2F2 783 aa10.5□□□□□ -0.73
RER1-205ENST00000443438 ERVV-1B6SEH8 477 aa10.5□□□□□ -0.73
RER1-205ENST00000443438 ERC2O15083 957 aa10.5□□□□□ -0.73
RER1-205ENST00000443438 PCCAP05165 728 aaPredicted RBP10.5□□□□□ -0.73
RER1-205ENST00000443438 SIK1P57059 783 aa10.5□□□□□ -0.73
RER1-205ENST00000443438 BECN1Q14457 450 aa10.5□□□□□ -0.73
RER1-205ENST00000443438 AACSQ86V21 672 aa10.5□□□□□ -0.73
RER1-205ENST00000443438 NLRP10Q86W26 655 aa10.5□□□□□ -0.73
RER1-205ENST00000443438 POTEDQ86YR6 584 aa10.5□□□□□ -0.73
RER1-205ENST00000443438 SNX21Q969T3 373 aa10.5□□□□□ -0.73
RER1-205ENST00000443438 ESYT1Q9BSJ8 1104 aa10.5□□□□□ -0.73
RER1-205ENST00000443438 ECHDC1Q9NTX5 307 aa10.5□□□□□ -0.73
RER1-205ENST00000443438 PALLDQ8WX93 1383 aa10.5□□□□□ -0.73
RER1-205ENST00000443438 ONECUT3O60422 494 aaPredicted RBP10.49□□□□□ -0.73
RER1-205ENST00000443438 GLRX3O76003 335 aaKnown RBP10.49□□□□□ -0.73
RER1-205ENST00000443438 CSF1RP07333 972 aa10.49□□□□□ -0.73
RER1-205ENST00000443438 ATP6V1AP38606 617 aa10.49□□□□□ -0.73
RER1-205ENST00000443438 CASC1Q6TDU7 716 aa10.49□□□□□ -0.73
RER1-205ENST00000443438 PTF1AQ7RTS3 328 aa10.49□□□□□ -0.73
RER1-205ENST00000443438 ATG9AQ7Z3C6 839 aa10.49□□□□□ -0.73
RER1-205ENST00000443438 ZNF34Q8IZ26 560 aa10.49□□□□□ -0.73
RER1-205ENST00000443438 ZBTB38Q8NAP3 1195 aaPredicted RBP10.49□□□□□ -0.73
RER1-205ENST00000443438 SMARCC1Q92922 1105 aaPredicted RBP10.49□□□□□ -0.73
RER1-205ENST00000443438 SIL1Q9H173 461 aa10.49□□□□□ -0.73
RER1-205ENST00000443438 CCDC87Q9NVE4 849 aa10.49□□□□□ -0.73
RER1-205ENST00000443438 TLR7Q9NYK1 1049 aaKnown RBP10.49□□□□□ -0.73
RER1-205ENST00000443438 CDHR2Q9BYE9 1310 aa10.49□□□□□ -0.73
RER1-205ENST00000443438 ZNF831Q5JPB2 1677 aa10.48□□□□□ -0.73
RER1-205ENST00000443438 TRIM6-TRIM34B2RNG4 842 aa10.48□□□□□ -0.73
RER1-205ENST00000443438 MAP4K4O95819 1239 aaPredicted RBP10.48□□□□□ -0.73
RER1-205ENST00000443438 IFIT2P09913 472 aaKnown RBP10.48□□□□□ -0.73
RER1-205ENST00000443438 CRKLP46109 303 aaKnown RBP10.48□□□□□ -0.73
RER1-205ENST00000443438 TFCP2Q12800 502 aa10.48□□□□□ -0.73
RER1-205ENST00000443438 HSP90AB3PQ58FF7 597 aa10.48□□□□□ -0.73
RER1-205ENST00000443438 RILPL2Q969X0 211 aa10.48□□□□□ -0.73
RER1-205ENST00000443438 CCDC8Q9H0W5 538 aaPredicted RBP10.48□□□□□ -0.73
RER1-205ENST00000443438 IL25Q9H293 177 aa10.48□□□□□ -0.73
RER1-205ENST00000443438 ANTXR1Q9H6X2 564 aa10.48□□□□□ -0.73
RER1-205ENST00000443438 ZNF330Q9Y3S2 320 aaPredicted RBP10.48□□□□□ -0.73
RER1-205ENST00000443438 ATRNO75882 1429 aa10.48□□□□□ -0.73
RER1-205ENST00000443438 CIAO1O76071 339 aa10.47□□□□□ -0.73
RER1-205ENST00000443438 CAMTA2O94983 1202 aa10.47□□□□□ -0.73
RER1-205ENST00000443438 TNNI3KQ59H18 835 aa10.47□□□□□ -0.73
RER1-205ENST00000443438 RTL5Q5HYW3 569 aaPredicted RBP10.47□□□□□ -0.73
RER1-205ENST00000443438 DZIP3Q86Y13 1208 aaKnown RBP10.47□□□□□ -0.73
RER1-205ENST00000443438 SYNE4Q8N205 404 aa10.47□□□□□ -0.73
RER1-205ENST00000443438 IL17RAQ96F46 866 aa10.47□□□□□ -0.73
RER1-205ENST00000443438 FAM89AQ96GI7 184 aa10.47□□□□□ -0.73
RER1-205ENST00000443438 GJD4Q96KN9 370 aaPredicted RBP10.47□□□□□ -0.73
RER1-205ENST00000443438 TBC1D2BQ9UPU7 963 aa10.47□□□□□ -0.73
RER1-205ENST00000443438 FPGT-TNNI3KV9GXZ4 949 aa10.47□□□□□ -0.73
RER1-205ENST00000443438 EYA2O00167 538 aa10.46□□□□□ -0.73
RER1-205ENST00000443438 REC8O95072 547 aa10.46□□□□□ -0.73
RER1-205ENST00000443438 CD2BP2O95400 341 aaKnown RBP10.46□□□□□ -0.73
RER1-205ENST00000443438 GPTP24298 496 aa10.46□□□□□ -0.73
RER1-205ENST00000443438 CNTROBQ8N137 903 aa10.46□□□□□ -0.73
RER1-205ENST00000443438 LINC00116Q8NCU8 138 aa10.46□□□□□ -0.73
RER1-205ENST00000443438 ZNF594Q96JF6 807 aaPredicted RBP10.46□□□□□ -0.73
RER1-205ENST00000443438 GPR108Q9NPR9 543 aa10.46□□□□□ -0.73
RER1-205ENST00000443438 DAXXQ9UER7 740 aaPredicted RBP10.46□□□□□ -0.73
RER1-205ENST00000443438 DBNLQ9UJU6 430 aaKnown RBP10.46□□□□□ -0.73
RER1-205ENST00000443438 AFF2P51816 1311 aa10.46□□□□□ -0.73
RER1-205ENST00000443438 UBN2Q6ZU65 1347 aa10.46□□□□□ -0.73
RER1-205ENST00000443438 ANKRD36CQ5JPF3 1778 aa10.45□□□□□ -0.74
RER1-205ENST00000443438 COL5A3P25940 1745 aaPredicted RBP10.45□□□□□ -0.74
RER1-205ENST00000443438 SGSM2O43147 1006 aa10.45□□□□□ -0.74
RER1-205ENST00000443438 EPB41L2O43491 1005 aaKnown RBP10.45□□□□□ -0.74
RER1-205ENST00000443438 MYCNP04198 464 aaPredicted RBP10.45□□□□□ -0.74
RER1-205ENST00000443438 ATP5JP18859 108 aa10.45□□□□□ -0.74
RER1-205ENST00000443438 IL15P40933 162 aaPredicted RBP10.45□□□□□ -0.74
RER1-205ENST00000443438 LRRC24Q50LG9 513 aa10.45□□□□□ -0.74
RER1-205ENST00000443438 EVI5LQ96CN4 794 aa10.45□□□□□ -0.74
RER1-205ENST00000443438 GPATCH3Q96I76 525 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms