RNA–Protein interactions for RNA: ENST00000442942.6

UBXN11-210, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-210ENST00000442942 RIC3Q7Z5B4 369 aa17.57■□□□□ 0.4
UBXN11-210ENST00000442942 NLRP10Q86W26 655 aa17.57■□□□□ 0.4
UBXN11-210ENST00000442942 TTLL6Q8N841 843 aa17.57■□□□□ 0.4
UBXN11-210ENST00000442942 CCDC88AQ3V6T2 1871 aa17.56■□□□□ 0.4
UBXN11-210ENST00000442942 SLC4A2P04920 1241 aa17.56■□□□□ 0.4
UBXN11-210ENST00000442942 SLFN5Q08AF3 891 aa17.56■□□□□ 0.4
UBXN11-210ENST00000442942 ZNF622Q969S3 477 aaKnown RBP eCLIP17.56■□□□□ 0.4
UBXN11-210ENST00000442942 ISCA1Q9BUE6 129 aa17.56■□□□□ 0.4
UBXN11-210ENST00000442942 UTP14AQ9BVJ6 771 aaKnown RBP17.56■□□□□ 0.4
UBXN11-210ENST00000442942 RNF123Q5XPI4 1314 aa17.55■□□□□ 0.4
UBXN11-210ENST00000442942 DDX58O95786 925 aaKnown RBP17.55■□□□□ 0.4
UBXN11-210ENST00000442942 STYK1Q6J9G0 422 aa17.55■□□□□ 0.4
UBXN11-210ENST00000442942 G2E3Q7L622 706 aa17.55■□□□□ 0.4
UBXN11-210ENST00000442942 CDCA7LQ96GN5 454 aa17.55■□□□□ 0.4
UBXN11-210ENST00000442942 MASTLQ96GX5 879 aa17.55■□□□□ 0.4
UBXN11-210ENST00000442942 DDX60Q8IY21 1712 aaKnown RBP17.55■□□□□ 0.4
UBXN11-210ENST00000442942 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
UBXN11-210ENST00000442942 ATP5J2-PTCD1G3V325 749 aa17.54■□□□□ 0.4
UBXN11-210ENST00000442942 TRIM28Q13263 835 aaKnown RBP17.54■□□□□ 0.4
UBXN11-210ENST00000442942 ADCY9O60503 1353 aa17.53■□□□□ 0.4
UBXN11-210ENST00000442942 NPR1P16066 1061 aa17.53■□□□□ 0.4
UBXN11-210ENST00000442942 CRY2Q49AN0 593 aa17.53■□□□□ 0.4
UBXN11-210ENST00000442942 KSR2Q6VAB6 950 aa17.53■□□□□ 0.4
UBXN11-210ENST00000442942 CNKSR1Q969H4 720 aa17.53■□□□□ 0.4
UBXN11-210ENST00000442942 TRMT112Q9UI30 125 aaKnown RBP17.53■□□□□ 0.4
UBXN11-210ENST00000442942 PI4KAP2A4QPH2 592 aa17.52■□□□□ 0.4
UBXN11-210ENST00000442942 FLIIQ13045 1269 aa17.52■□□□□ 0.4
UBXN11-210ENST00000442942 SLC10A5Q5PT55 438 aa17.52■□□□□ 0.4
UBXN11-210ENST00000442942 ARHGAP27Q6ZUM4 889 aa17.52■□□□□ 0.4
UBXN11-210ENST00000442942 TRMT2AQ8IZ69 625 aaKnown RBP17.52■□□□□ 0.4
UBXN11-210ENST00000442942 PI4KAP1Q8N8J0 262 aa17.52■□□□□ 0.4
UBXN11-210ENST00000442942 MYD88Q99836 296 aa17.52■□□□□ 0.4
UBXN11-210ENST00000442942 METTL22Q9BUU2 404 aaPredicted RBP17.52■□□□□ 0.4
UBXN11-210ENST00000442942 MAP3K2Q9Y2U5 619 aa17.52■□□□□ 0.4
UBXN11-210ENST00000442942 SH3TC1Q8TE82 1336 aa17.51■□□□□ 0.39
UBXN11-210ENST00000442942 TAF1P21675 1872 aa17.51■□□□□ 0.39
UBXN11-210ENST00000442942 PRPF40BQ6NWY9 871 aaKnown RBP17.51■□□□□ 0.39
UBXN11-210ENST00000442942 SYNE4Q8N205 404 aa17.51■□□□□ 0.39
UBXN11-210ENST00000442942 ZNF428Q96B54 188 aa17.51■□□□□ 0.39
UBXN11-210ENST00000442942 C3orf67Q6ZVT6 689 aa17.5■□□□□ 0.39
UBXN11-210ENST00000442942 MYH3P11055 1940 aa17.49■□□□□ 0.39
UBXN11-210ENST00000442942 HCLS1P14317 486 aaPredicted RBP17.49■□□□□ 0.39
UBXN11-210ENST00000442942 FKBP5Q13451 457 aaPredicted RBP17.49■□□□□ 0.39
UBXN11-210ENST00000442942 CCDC191Q8NCU4 936 aa17.49■□□□□ 0.39
UBXN11-210ENST00000442942 NLRP3Q96P20 1036 aa17.49■□□□□ 0.39
UBXN11-210ENST00000442942 DICER1Q9UPY3 1922 aaKnown RBP17.49■□□□□ 0.39
UBXN11-210ENST00000442942 C21orf2O43822 256 aa17.48■□□□□ 0.39
UBXN11-210ENST00000442942 HNRNPUQ00839 825 aaKnown RBP eCLIP17.48■□□□□ 0.39
UBXN11-210ENST00000442942 FAM89AQ96GI7 184 aa17.48■□□□□ 0.39
UBXN11-210ENST00000442942 ZNF219Q9P2Y4 722 aaPredicted RBP17.48■□□□□ 0.39
UBXN11-210ENST00000442942 IGKV5-2P06315 115 aa17.47■□□□□ 0.39
UBXN11-210ENST00000442942 ALDH1B1P30837 517 aa17.47■□□□□ 0.39
UBXN11-210ENST00000442942 HOXA10P31260 410 aaPredicted RBP17.47■□□□□ 0.39
UBXN11-210ENST00000442942 ZBTB38Q8NAP3 1195 aaPredicted RBP17.47■□□□□ 0.39
UBXN11-210ENST00000442942 C7orf43Q8WVR3 580 aa17.47■□□□□ 0.39
UBXN11-210ENST00000442942 RPGRQ92834 1020 aaKnown RBP17.47■□□□□ 0.39
UBXN11-210ENST00000442942 CWC25Q9NXE8 425 aaPredicted RBP17.47■□□□□ 0.39
UBXN11-210ENST00000442942 NEXNQ0ZGT2 675 aa17.46■□□□□ 0.39
UBXN11-210ENST00000442942 RTL5Q5HYW3 569 aaPredicted RBP17.46■□□□□ 0.39
UBXN11-210ENST00000442942 DNAAF4Q8WXU2 420 aa17.46■□□□□ 0.39
UBXN11-210ENST00000442942 NFKBIEO00221 500 aa17.45■□□□□ 0.38
UBXN11-210ENST00000442942 PCCAP05165 728 aaPredicted RBP17.45■□□□□ 0.38
UBXN11-210ENST00000442942 RASSF7Q02833 373 aa17.45■□□□□ 0.38
UBXN11-210ENST00000442942 RBM17Q96I25 401 aaKnown RBP17.45■□□□□ 0.38
UBXN11-210ENST00000442942 CRAMP1Q96RY5 1269 aa17.45■□□□□ 0.38
UBXN11-210ENST00000442942 NEURL1BA8MQ27 555 aa17.44■□□□□ 0.38
UBXN11-210ENST00000442942 IRS4O14654 1257 aaPredicted RBP17.44■□□□□ 0.38
UBXN11-210ENST00000442942 CWF19L2Q2TBE0 894 aaKnown RBP17.44■□□□□ 0.38
UBXN11-210ENST00000442942 SOGA3Q5TF21 947 aa17.44■□□□□ 0.38
UBXN11-210ENST00000442942 ZNF784Q8NCA9 323 aaPredicted RBP17.44■□□□□ 0.38
UBXN11-210ENST00000442942 F6X3S4 739 aa17.43■□□□□ 0.38
UBXN11-210ENST00000442942 CT47B1P0C2W7 299 aaPredicted RBP17.43■□□□□ 0.38
UBXN11-210ENST00000442942 C9orf131Q5VYM1 1079 aa17.43■□□□□ 0.38
UBXN11-210ENST00000442942 MRPL50Q8N5N7 158 aaKnown RBP17.43■□□□□ 0.38
UBXN11-210ENST00000442942 SSH1Q8WYL5 1049 aa17.43■□□□□ 0.38
UBXN11-210ENST00000442942 TIAM2Q8IVF5 1701 aa17.43■□□□□ 0.38
UBXN11-210ENST00000442942 ABCC4O15439 1325 aa17.43■□□□□ 0.38
UBXN11-210ENST00000442942 PRELPP51888 382 aa17.42■□□□□ 0.38
UBXN11-210ENST00000442942 SF3B3Q15393 1217 aaKnown RBP17.42■□□□□ 0.38
UBXN11-210ENST00000442942 CCDC93Q567U6 631 aa17.42■□□□□ 0.38
UBXN11-210ENST00000442942 OLFM4Q6UX06 510 aa17.42■□□□□ 0.38
UBXN11-210ENST00000442942 LINS1Q8NG48 757 aa17.42■□□□□ 0.38
UBXN11-210ENST00000442942 JARID2Q92833 1246 aaPredicted RBP17.42■□□□□ 0.38
UBXN11-210ENST00000442942 RNF181Q9P0P0 153 aa17.42■□□□□ 0.38
UBXN11-210ENST00000442942 LTBP3Q9NS15 1303 aa17.42■□□□□ 0.38
UBXN11-210ENST00000442942 SNED1Q8TER0 1413 aa17.41■□□□□ 0.38
UBXN11-210ENST00000442942 HSP90B1P14625 803 aaKnown RBP17.41■□□□□ 0.38
UBXN11-210ENST00000442942 ALDH1L2Q3SY69 923 aa17.41■□□□□ 0.38
UBXN11-210ENST00000442942 BCL2L13Q9BXK5 485 aa17.41■□□□□ 0.38
UBXN11-210ENST00000442942 CDHR2Q9BYE9 1310 aa17.41■□□□□ 0.38
UBXN11-210ENST00000442942 PPEF1O14829 653 aaPredicted RBP17.4■□□□□ 0.38
UBXN11-210ENST00000442942 LMNB1P20700 586 aa17.4■□□□□ 0.38
UBXN11-210ENST00000442942 GCKRQ14397 625 aa17.4■□□□□ 0.38
UBXN11-210ENST00000442942 BEND3Q5T5X7 828 aa17.4■□□□□ 0.38
UBXN11-210ENST00000442942 DDX46Q7L014 1031 aaKnown RBP17.4■□□□□ 0.38
UBXN11-210ENST00000442942 TAOK3Q9H2K8 898 aa17.4■□□□□ 0.38
UBXN11-210ENST00000442942 ZBED9Q6R2W3 1325 aa17.4■□□□□ 0.38
UBXN11-210ENST00000442942 COL4A1P02462 1669 aa17.39■□□□□ 0.37
UBXN11-210ENST00000442942 LRRC37AA6NMS7 1700 aa17.39■□□□□ 0.37
UBXN11-210ENST00000442942 H7C1W4 665 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms