RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 TBC1D2BQ9UPU7 963 aa8.64□□□□□ -1.03
HDAC6-210ENST00000441703 MRC1P22897 1456 aa8.64□□□□□ -1.03
HDAC6-210ENST00000441703 EIF5P55010 431 aaKnown RBP8.63□□□□□ -1.03
HDAC6-210ENST00000441703 SLC39A6Q13433 755 aa8.63□□□□□ -1.03
HDAC6-210ENST00000441703 FBXO46Q6PJ61 603 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-210ENST00000441703 VSIG10Q8N0Z9 540 aa8.63□□□□□ -1.03
HDAC6-210ENST00000441703 C2orf69Q8N8R5 385 aa8.63□□□□□ -1.03
HDAC6-210ENST00000441703 SLC52A2Q9HAB3 445 aa8.63□□□□□ -1.03
HDAC6-210ENST00000441703 GPRC5DQ9NZD1 345 aa8.63□□□□□ -1.03
HDAC6-210ENST00000441703 POLKQ9UBT6 870 aa8.63□□□□□ -1.03
HDAC6-210ENST00000441703 COLQQ9Y215 455 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-210ENST00000441703 UBR2Q8IWV8 1755 aa8.63□□□□□ -1.03
HDAC6-210ENST00000441703 FAM155AB1AL88 458 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-210ENST00000441703 CDCA8Q53HL2 280 aa8.62□□□□□ -1.03
HDAC6-210ENST00000441703 CC2D2BQ6DHV5 1058 aa8.62□□□□□ -1.03
HDAC6-210ENST00000441703 REM2Q8IYK8 340 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-210ENST00000441703 ZC3H15Q8WU90 426 aaKnown RBP8.62□□□□□ -1.03
HDAC6-210ENST00000441703 BCL2L13Q9BXK5 485 aa8.62□□□□□ -1.03
HDAC6-210ENST00000441703 CARD14Q9BXL6 1004 aa8.62□□□□□ -1.03
HDAC6-210ENST00000441703 GBA2Q9HCG7 927 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-210ENST00000441703 USP48Q86UV5 1035 aa8.61□□□□□ -1.03
HDAC6-210ENST00000441703 TTC5Q8N0Z6 440 aa8.61□□□□□ -1.03
HDAC6-210ENST00000441703 ZNF296Q8WUU4 475 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-210ENST00000441703 CSRNP1Q96S65 589 aa8.61□□□□□ -1.03
HDAC6-210ENST00000441703 CCER2I3L3R5 266 aa8.6□□□□□ -1.03
HDAC6-210ENST00000441703 PPIP5K2O43314 1243 aa8.6□□□□□ -1.03
HDAC6-210ENST00000441703 SLC10A3P09131 477 aa8.6□□□□□ -1.03
HDAC6-210ENST00000441703 GTF2E1P29083 439 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-210ENST00000441703 GMPSP49915 693 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-210ENST00000441703 GRIPAP1Q4V328 841 aa8.6□□□□□ -1.03
HDAC6-210ENST00000441703 TMX4Q9H1E5 349 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-210ENST00000441703 PGAP2Q9UHJ9 254 aa8.6□□□□□ -1.03
HDAC6-210ENST00000441703 ZNF652Q9Y2D9 606 aa8.6□□□□□ -1.03
HDAC6-210ENST00000441703 CAMTA2O94983 1202 aa8.59□□□□□ -1.03
HDAC6-210ENST00000441703 DEKP35659 375 aaKnown RBP8.59□□□□□ -1.03
HDAC6-210ENST00000441703 IL6STP40189 918 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-210ENST00000441703 TNNT2P45379 298 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-210ENST00000441703 INTS3Q68E01 1043 aaKnown RBP8.59□□□□□ -1.03
HDAC6-210ENST00000441703 TPTE2Q6XPS3 522 aa8.59□□□□□ -1.03
HDAC6-210ENST00000441703 DZIP3Q86Y13 1208 aaKnown RBP8.59□□□□□ -1.03
HDAC6-210ENST00000441703 NPC1L1Q9UHC9 1359 aa8.59□□□□□ -1.03
HDAC6-210ENST00000441703 COL4A5P29400 1685 aa8.59□□□□□ -1.03
HDAC6-210ENST00000441703 CDHR2Q9BYE9 1310 aa8.58□□□□□ -1.04
HDAC6-210ENST00000441703 KLRG2A4D1S0 409 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-210ENST00000441703 POTEFA5A3E0 1075 aa8.58□□□□□ -1.04
HDAC6-210ENST00000441703 FAM177BA6PVY3 158 aa8.58□□□□□ -1.04
HDAC6-210ENST00000441703 H7C1D1 291 aa8.58□□□□□ -1.04
HDAC6-210ENST00000441703 TBC1D8O95759 1140 aa8.58□□□□□ -1.04
HDAC6-210ENST00000441703 MNX1P50219 401 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-210ENST00000441703 KRT26Q7Z3Y9 468 aa8.58□□□□□ -1.04
HDAC6-210ENST00000441703 TRPM4Q8TD43 1214 aa8.58□□□□□ -1.04
HDAC6-210ENST00000441703 TEX13AQ9BXU3 409 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-210ENST00000441703 PITPNM2Q9BZ72 1349 aa8.57□□□□□ -1.04
HDAC6-210ENST00000441703 GPR25O00155 361 aa8.57□□□□□ -1.04
HDAC6-210ENST00000441703 RNMTO43148 476 aaKnown RBP8.57□□□□□ -1.04
HDAC6-210ENST00000441703 HIRAP54198 1017 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-210ENST00000441703 AOC3Q16853 763 aa8.57□□□□□ -1.04
HDAC6-210ENST00000441703 AEBP1Q8IUX7 1158 aa8.57□□□□□ -1.04
HDAC6-210ENST00000441703 RPGRQ92834 1020 aaKnown RBP8.57□□□□□ -1.04
HDAC6-210ENST00000441703 LGR6Q9HBX8 967 aa8.57□□□□□ -1.04
HDAC6-210ENST00000441703 TCERG1O14776 1098 aaKnown RBP8.56□□□□□ -1.04
HDAC6-210ENST00000441703 FKTNO75072 461 aa8.56□□□□□ -1.04
HDAC6-210ENST00000441703 CXCL9Q07325 125 aa8.56□□□□□ -1.04
HDAC6-210ENST00000441703 TNIP1Q15025 636 aa8.56□□□□□ -1.04
HDAC6-210ENST00000441703 SULT6B1Q6IMI4 303 aa8.56□□□□□ -1.04
HDAC6-210ENST00000441703 RASAL3Q86YV0 1011 aa8.56□□□□□ -1.04
HDAC6-210ENST00000441703 DCPSQ96C86 337 aaKnown RBP8.56□□□□□ -1.04
HDAC6-210ENST00000441703 CNOT7Q9UIV1 285 aaKnown RBP8.56□□□□□ -1.04
HDAC6-210ENST00000441703 ZNRF3Q9ULT6 936 aa8.56□□□□□ -1.04
HDAC6-210ENST00000441703 NIP7Q9Y221 180 aaKnown RBP eCLIP8.56□□□□□ -1.04
HDAC6-210ENST00000441703 SNED1Q8TER0 1413 aa8.55□□□□□ -1.04
HDAC6-210ENST00000441703 PPEF1O14829 653 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-210ENST00000441703 CLEC4GQ6UXB4 293 aa8.55□□□□□ -1.04
HDAC6-210ENST00000441703 DLK2Q6UY11 383 aa8.55□□□□□ -1.04
HDAC6-210ENST00000441703 CHRDL2Q6WN34 429 aa8.55□□□□□ -1.04
HDAC6-210ENST00000441703 SUPT20HQ8NEM7 779 aa8.55□□□□□ -1.04
HDAC6-210ENST00000441703 PAPPA2Q9BXP8 1791 aa8.54□□□□□ -1.04
HDAC6-210ENST00000441703 HEG1Q9ULI3 1381 aa8.54□□□□□ -1.04
HDAC6-210ENST00000441703 ADM5C9JUS6 153 aa8.54□□□□□ -1.04
HDAC6-210ENST00000441703 RAD17O75943 681 aa8.54□□□□□ -1.04
HDAC6-210ENST00000441703 A1BGP04217 495 aa8.54□□□□□ -1.04
HDAC6-210ENST00000441703 EN2P19622 333 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-210ENST00000441703 NOM1Q5C9Z4 860 aaKnown RBP8.54□□□□□ -1.04
HDAC6-210ENST00000441703 SULF1Q8IWU6 871 aa8.54□□□□□ -1.04
HDAC6-210ENST00000441703 MICALL2Q8IY33 904 aa8.54□□□□□ -1.04
HDAC6-210ENST00000441703 RBM17Q96I25 401 aaKnown RBP8.54□□□□□ -1.04
HDAC6-210ENST00000441703 TMEM106CQ9BVX2 250 aa8.54□□□□□ -1.04
HDAC6-210ENST00000441703 VPS33BQ9H267 617 aa8.54□□□□□ -1.04
HDAC6-210ENST00000441703 TRIM17Q9Y577 477 aa8.54□□□□□ -1.04
HDAC6-210ENST00000441703 SIPA1L3O60292 1781 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-210ENST00000441703 H0YGN5 161 aa8.53□□□□□ -1.04
HDAC6-210ENST00000441703 OTUD5Q96G74 571 aa8.53□□□□□ -1.04
HDAC6-210ENST00000441703 ZNF496Q96IT1 587 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-210ENST00000441703 NYXQ9GZU5 481 aa8.53□□□□□ -1.04
HDAC6-210ENST00000441703 TBC1D10BQ4KMP7 808 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-210ENST00000441703 RBM26Q5T8P6 1007 aaKnown RBP8.52□□□□□ -1.05
HDAC6-210ENST00000441703 SAMD7Q7Z3H4 446 aa8.52□□□□□ -1.05
HDAC6-210ENST00000441703 FMNL2Q96PY5 1086 aa8.52□□□□□ -1.05
HDAC6-210ENST00000441703 TRIOBPQ9H2D6 2365 aa8.52□□□□□ -1.05
HDAC6-210ENST00000441703 RBBP6Q7Z6E9 1792 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms