RNA–Protein interactions for RNA: ENST00000440234.6

RBM38-205, Transcript of RNA binding motif protein 38, humanhuman

TSL 2 BASIC

Gene RBM38, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-205ENST00000440234 CCDC27Q2M243 656 aa28.71■■■□□ 2.19
RBM38-205ENST00000440234 PROSER3Q2NL68 480 aa28.71■■■□□ 2.19
RBM38-205ENST00000440234 ZNF277Q9NRM2 450 aaPredicted RBP28.71■■■□□ 2.19
RBM38-205ENST00000440234 SALL2Q9Y467 1007 aaPredicted RBP28.71■■■□□ 2.19
RBM38-205ENST00000440234 WDR90Q96KV7 1748 aa28.71■■■□□ 2.19
RBM38-205ENST00000440234 ANXA1P04083 346 aa28.7■■■□□ 2.18
RBM38-205ENST00000440234 PARP10Q53GL7 1025 aa28.7■■■□□ 2.18
RBM38-205ENST00000440234 PPP1R42Q7Z4L9 355 aa28.7■■■□□ 2.18
RBM38-205ENST00000440234 RPGRQ92834 1020 aaKnown RBP28.7■■■□□ 2.18
RBM38-205ENST00000440234 NUP98P52948 1817 aa28.7■■■□□ 2.18
RBM38-205ENST00000440234 NTSR2O95665 410 aa28.69■■■□□ 2.18
RBM38-205ENST00000440234 SYNE4Q8N205 404 aa28.69■■■□□ 2.18
RBM38-205ENST00000440234 CACNA1SQ13698 1873 aa28.68■■■□□ 2.18
RBM38-205ENST00000440234 CALD1Q05682 793 aaKnown RBP28.68■■■□□ 2.18
RBM38-205ENST00000440234 CC2D2BQ6DHV5 1058 aa28.68■■■□□ 2.18
RBM38-205ENST00000440234 NECTIN2Q92692 538 aa28.68■■■□□ 2.18
RBM38-205ENST00000440234 RIC1Q4ADV7 1423 aa28.68■■■□□ 2.18
RBM38-205ENST00000440234 COPS6Q7L5N1 327 aa28.67■■■□□ 2.18
RBM38-205ENST00000440234 RBM17Q96I25 401 aaKnown RBP28.66■■■□□ 2.18
RBM38-205ENST00000440234 CRAMP1Q96RY5 1269 aa28.66■■■□□ 2.18
RBM38-205ENST00000440234 LAS1LQ9Y4W2 734 aaKnown RBP28.66■■■□□ 2.18
RBM38-205ENST00000440234 IARSP41252 1262 aaKnown RBP28.65■■■□□ 2.18
RBM38-205ENST00000440234 HNRNPUQ00839 825 aaKnown RBP eCLIP28.65■■■□□ 2.18
RBM38-205ENST00000440234 KRT24Q2M2I5 525 aa28.65■■■□□ 2.18
RBM38-205ENST00000440234 SLC10A5Q5PT55 438 aa28.65■■■□□ 2.18
RBM38-205ENST00000440234 IFFO2Q5TF58 517 aa28.65■■■□□ 2.18
RBM38-205ENST00000440234 WWC1Q8IX03 1113 aa28.65■■■□□ 2.18
RBM38-205ENST00000440234 XAGE3Q8WTP9 111 aa28.65■■■□□ 2.18
RBM38-205ENST00000440234 L3MBTL3Q96JM7 780 aaPredicted RBP28.65■■■□□ 2.18
RBM38-205ENST00000440234 PSMD1Q99460 953 aa28.65■■■□□ 2.18
RBM38-205ENST00000440234 UTP14AQ9BVJ6 771 aaKnown RBP28.65■■■□□ 2.18
RBM38-205ENST00000440234 DDX21Q9NR30 783 aaKnown RBP eCLIP28.65■■■□□ 2.18
RBM38-205ENST00000440234 IQCA1LA6NCM1 817 aa28.64■■■□□ 2.18
RBM38-205ENST00000440234 AIMP1Q12904 312 aaKnown RBP28.64■■■□□ 2.18
RBM38-205ENST00000440234 JMYQ8N9B5 988 aa28.64■■■□□ 2.18
RBM38-205ENST00000440234 NLRP3Q96P20 1036 aa28.64■■■□□ 2.18
RBM38-205ENST00000440234 GRIPAP1Q4V328 841 aa28.63■■■□□ 2.17
RBM38-205ENST00000440234 HSP90AB3PQ58FF7 597 aa28.63■■■□□ 2.17
RBM38-205ENST00000440234 CHADLQ6NUI6 762 aa28.63■■■□□ 2.17
RBM38-205ENST00000440234 C3orf67Q6ZVT6 689 aa28.63■■■□□ 2.17
RBM38-205ENST00000440234 FZD9O00144 591 aa28.62■■■□□ 2.17
RBM38-205ENST00000440234 SNED1Q8TER0 1413 aa28.61■■■□□ 2.17
RBM38-205ENST00000440234 POTEIP0CG38 1075 aa28.61■■■□□ 2.17
RBM38-205ENST00000440234 POTEJP0CG39 1038 aa28.61■■■□□ 2.17
RBM38-205ENST00000440234 ZNF541Q9H0D2 1346 aa28.61■■■□□ 2.17
RBM38-205ENST00000440234 TCIRG1Q13488 830 aa28.6■■■□□ 2.17
RBM38-205ENST00000440234 CFAP44Q96MT7 982 aa28.6■■■□□ 2.17
RBM38-205ENST00000440234 TAF1DQ9H5J8 278 aaPredicted RBP28.6■■■□□ 2.17
RBM38-205ENST00000440234 HOXB7P09629 217 aa28.59■■■□□ 2.17
RBM38-205ENST00000440234 NLRP10Q86W26 655 aa28.59■■■□□ 2.17
RBM38-205ENST00000440234 WDR63Q8IWG1 891 aa28.59■■■□□ 2.17
RBM38-205ENST00000440234 JDP2Q8WYK2 163 aa28.59■■■□□ 2.17
RBM38-205ENST00000440234 RNF123Q5XPI4 1314 aa28.59■■■□□ 2.17
RBM38-205ENST00000440234 PPEF1O14829 653 aaPredicted RBP28.58■■■□□ 2.17
RBM38-205ENST00000440234 CHPF2Q9P2E5 772 aa28.58■■■□□ 2.17
RBM38-205ENST00000440234 TCERG1O14776 1098 aaKnown RBP28.57■■■□□ 2.16
RBM38-205ENST00000440234 HDGFL1Q5TGJ6 251 aa28.57■■■□□ 2.16
RBM38-205ENST00000440234 IL16Q14005 1332 aa28.57■■■□□ 2.16
RBM38-205ENST00000440234 LDHDQ86WU2 507 aa28.56■■■□□ 2.16
RBM38-205ENST00000440234 HACL1Q9UJ83 578 aa28.56■■■□□ 2.16
RBM38-205ENST00000440234 ZNF521Q96K83 1311 aa28.55■■■□□ 2.16
RBM38-205ENST00000440234 GNAI1P63096 354 aa28.55■■■□□ 2.16
RBM38-205ENST00000440234 GPC2Q8N158 579 aa28.55■■■□□ 2.16
RBM38-205ENST00000440234 IFT57Q9NWB7 429 aa28.55■■■□□ 2.16
RBM38-205ENST00000440234 DBF4Q9UBU7 674 aaPredicted RBP28.55■■■□□ 2.16
RBM38-205ENST00000440234 TRMT112Q9UI30 125 aaKnown RBP28.55■■■□□ 2.16
RBM38-205ENST00000440234 DUSP27Q5VZP5 1158 aa28.54■■■□□ 2.16
RBM38-205ENST00000440234 TMX4Q9H1E5 349 aaPredicted RBP28.54■■■□□ 2.16
RBM38-205ENST00000440234 ATP6V0A2Q9Y487 856 aa28.54■■■□□ 2.16
RBM38-205ENST00000440234 HCLS1P14317 486 aaPredicted RBP28.53■■■□□ 2.16
RBM38-205ENST00000440234 ANKRD13DQ6ZTN6 518 aa28.53■■■□□ 2.16
RBM38-205ENST00000440234 SLC51AQ86UW1 340 aa28.53■■■□□ 2.16
RBM38-205ENST00000440234 LARGE2Q8N3Y3 721 aa28.53■■■□□ 2.16
RBM38-205ENST00000440234 PLBD2Q8NHP8 589 aa28.53■■■□□ 2.16
RBM38-205ENST00000440234 MBIPQ9NS73 344 aa28.53■■■□□ 2.16
RBM38-205ENST00000440234 BBOX1O75936 387 aa28.52■■■□□ 2.16
RBM38-205ENST00000440234 ZNF853P0CG23 659 aa28.52■■■□□ 2.16
RBM38-205ENST00000440234 EPHX2P34913 555 aa28.52■■■□□ 2.16
RBM38-205ENST00000440234 EIF6P56537 245 aaKnown RBP28.52■■■□□ 2.16
RBM38-205ENST00000440234 ABCC4O15439 1325 aa28.51■■■□□ 2.15
RBM38-205ENST00000440234 SH3TC1Q8TE82 1336 aa28.51■■■□□ 2.15
RBM38-205ENST00000440234 EAPPQ56P03 285 aaPredicted RBP28.51■■■□□ 2.15
RBM38-205ENST00000440234 HYPKQ9NX55 129 aa28.51■■■□□ 2.15
RBM38-205ENST00000440234 SCN4AP35499 1836 aa28.5■■■□□ 2.15
RBM38-205ENST00000440234 ZBED9Q6R2W3 1325 aa28.5■■■□□ 2.15
RBM38-205ENST00000440234 GOLGA2Q08379 1002 aa28.5■■■□□ 2.15
RBM38-205ENST00000440234 PNMA8AQ86V59 439 aaPredicted RBP28.5■■■□□ 2.15
RBM38-205ENST00000440234 CREBZFQ9NS37 354 aa28.5■■■□□ 2.15
RBM38-205ENST00000440234 VPS33BQ9H267 617 aa28.49■■■□□ 2.15
RBM38-205ENST00000440234 CLEC11AQ9Y240 323 aa28.49■■■□□ 2.15
RBM38-205ENST00000440234 GJA3Q9Y6H8 435 aa28.49■■■□□ 2.15
RBM38-205ENST00000440234 SP8Q8IXZ3 490 aa28.48■■■□□ 2.15
RBM38-205ENST00000440234 ISCA1Q9BUE6 129 aa28.48■■■□□ 2.15
RBM38-205ENST00000440234 PASKQ96RG2 1323 aa28.47■■■□□ 2.15
RBM38-205ENST00000440234 ITGBL1O95965 494 aaPredicted RBP28.47■■■□□ 2.15
RBM38-205ENST00000440234 DDX46Q7L014 1031 aaKnown RBP28.47■■■□□ 2.15
RBM38-205ENST00000440234 YTHDC1Q96MU7 727 aaKnown RBP28.47■■■□□ 2.15
RBM38-205ENST00000440234 MYH16Q9H6N6 1097 aa28.47■■■□□ 2.15
RBM38-205ENST00000440234 COL4A5P29400 1685 aa28.46■■■□□ 2.15
RBM38-205ENST00000440234 PPIP5K2O43314 1243 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms