RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 UPF3BQ9BZI7 483 aaKnown RBP12.59□□□□□ -0.39
CPNE1-218ENST00000439806 TNS2Q63HR2 1409 aa12.59□□□□□ -0.39
CPNE1-218ENST00000439806 WNK3Q9BYP7 1800 aa12.58□□□□□ -0.4
CPNE1-218ENST00000439806 FSD2A1L4K1 749 aa12.58□□□□□ -0.4
CPNE1-218ENST00000439806 NBPF26B4DH59 902 aa12.58□□□□□ -0.4
CPNE1-218ENST00000439806 RFX5P48382 616 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-218ENST00000439806 RABL6Q3YEC7 729 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-218ENST00000439806 NBPF14Q5TI25 921 aa12.58□□□□□ -0.4
CPNE1-218ENST00000439806 NBPF10Q6P3W6 841 aaKnown RBP12.58□□□□□ -0.4
CPNE1-218ENST00000439806 NBPF15Q8N660 670 aa12.58□□□□□ -0.4
CPNE1-218ENST00000439806 BOLA2Q9H3K6 86 aa12.58□□□□□ -0.4
CPNE1-218ENST00000439806 CWC25Q9NXE8 425 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-218ENST00000439806 CHMP3Q9Y3E7 222 aa12.58□□□□□ -0.4
CPNE1-218ENST00000439806 KCNJ4P48050 445 aa12.57□□□□□ -0.4
CPNE1-218ENST00000439806 MRE11P49959 708 aa12.57□□□□□ -0.4
CPNE1-218ENST00000439806 NMIQ13287 307 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-218ENST00000439806 TNNI3KQ59H18 835 aa12.57□□□□□ -0.4
CPNE1-218ENST00000439806 TLR7Q9NYK1 1049 aaKnown RBP12.57□□□□□ -0.4
CPNE1-218ENST00000439806 TMOD3Q9NYL9 352 aa12.57□□□□□ -0.4
CPNE1-218ENST00000439806 DDX49Q9Y6V7 483 aaKnown RBP12.57□□□□□ -0.4
CPNE1-218ENST00000439806 FPGT-TNNI3KV9GXZ4 949 aa12.57□□□□□ -0.4
CPNE1-218ENST00000439806 PLCH1Q4KWH8 1693 aa12.57□□□□□ -0.4
CPNE1-218ENST00000439806 CCDC171Q6TFL3 1326 aa12.57□□□□□ -0.4
CPNE1-218ENST00000439806 H7C1W4 665 aa12.56□□□□□ -0.4
CPNE1-218ENST00000439806 A1BGP04217 495 aa12.56□□□□□ -0.4
CPNE1-218ENST00000439806 CASP7P55210 303 aa12.56□□□□□ -0.4
CPNE1-218ENST00000439806 PTPN12Q05209 780 aaKnown RBP12.56□□□□□ -0.4
CPNE1-218ENST00000439806 TFCP2Q12800 502 aa12.56□□□□□ -0.4
CPNE1-218ENST00000439806 PKP1Q13835 747 aa12.56□□□□□ -0.4
CPNE1-218ENST00000439806 TTLL7Q6ZT98 887 aa12.56□□□□□ -0.4
CPNE1-218ENST00000439806 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-218ENST00000439806 NCLP19338 710 aaKnown RBP12.55□□□□□ -0.4
CPNE1-218ENST00000439806 PTH1RQ03431 593 aa12.55□□□□□ -0.4
CPNE1-218ENST00000439806 KLHL40Q2TBA0 621 aa12.55□□□□□ -0.4
CPNE1-218ENST00000439806 PRPF40BQ6NWY9 871 aaKnown RBP12.55□□□□□ -0.4
CPNE1-218ENST00000439806 LMBR1LQ6UX01 489 aa12.55□□□□□ -0.4
CPNE1-218ENST00000439806 ZBTB3Q9H5J0 574 aa12.55□□□□□ -0.4
CPNE1-218ENST00000439806 ZDHHC9Q9Y397 364 aa12.55□□□□□ -0.4
CPNE1-218ENST00000439806 RFX7Q2KHR2 1363 aa12.55□□□□□ -0.4
CPNE1-218ENST00000439806 ANKRD36CQ5JPF3 1778 aa12.54□□□□□ -0.4
CPNE1-218ENST00000439806 ZKSCAN1P17029 563 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-218ENST00000439806 ATP5JP18859 108 aa12.54□□□□□ -0.4
CPNE1-218ENST00000439806 CASTP20810 708 aaKnown RBP12.54□□□□□ -0.4
CPNE1-218ENST00000439806 AK2P54819 239 aa12.54□□□□□ -0.4
CPNE1-218ENST00000439806 FOXD4L5Q5VV16 416 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-218ENST00000439806 RASEFQ8IZ41 740 aa12.54□□□□□ -0.4
CPNE1-218ENST00000439806 CCDC191Q8NCU4 936 aa12.54□□□□□ -0.4
CPNE1-218ENST00000439806 FOXD4L4Q8WXT5 416 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-218ENST00000439806 JAKMIP1Q96N16 626 aaKnown RBP12.54□□□□□ -0.4
CPNE1-218ENST00000439806 TTC14Q96N46 770 aa12.54□□□□□ -0.4
CPNE1-218ENST00000439806 TEX13AQ9BXU3 409 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-218ENST00000439806 GRPEL1Q9HAV7 217 aa12.54□□□□□ -0.4
CPNE1-218ENST00000439806 PDRG1Q9NUG6 133 aa12.54□□□□□ -0.4
CPNE1-218ENST00000439806 LIMCH1Q9UPQ0 1083 aa12.54□□□□□ -0.4
CPNE1-218ENST00000439806 RBM8AQ9Y5S9 174 aaKnown RBP12.54□□□□□ -0.4
CPNE1-218ENST00000439806 ROBO1Q9Y6N7 1651 aa12.54□□□□□ -0.4
CPNE1-218ENST00000439806 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.54□□□□□ -0.4
CPNE1-218ENST00000439806 LRP6O75581 1613 aa12.53□□□□□ -0.4
CPNE1-218ENST00000439806 COL22A1Q8NFW1 1626 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-218ENST00000439806 BRD1O95696 1058 aa12.53□□□□□ -0.4
CPNE1-218ENST00000439806 XRCC6P12956 609 aaKnown RBP eCLIP12.53□□□□□ -0.4
CPNE1-218ENST00000439806 FOXO4P98177 505 aa12.53□□□□□ -0.4
CPNE1-218ENST00000439806 RNF20Q5VTR2 975 aa12.53□□□□□ -0.4
CPNE1-218ENST00000439806 KIF6Q6ZMV9 814 aa12.53□□□□□ -0.4
CPNE1-218ENST00000439806 KCNB2Q92953 911 aa12.53□□□□□ -0.4
CPNE1-218ENST00000439806 ZSCAN31Q96LW9 406 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-218ENST00000439806 FAM227BQ96M60 508 aa12.53□□□□□ -0.4
CPNE1-218ENST00000439806 TM6SF1Q9BZW5 370 aa12.53□□□□□ -0.4
CPNE1-218ENST00000439806 LMBRD1Q9NUN5 540 aa12.53□□□□□ -0.4
CPNE1-218ENST00000439806 DBNLQ9UJU6 430 aaKnown RBP12.53□□□□□ -0.4
CPNE1-218ENST00000439806 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-218ENST00000439806 CYP46A1Q9Y6A2 500 aa12.53□□□□□ -0.4
CPNE1-218ENST00000439806 WDR33Q9C0J8 1336 aaKnown RBP12.53□□□□□ -0.4
CPNE1-218ENST00000439806 A0A0D9SFI3 127 aa12.52□□□□□ -0.41
CPNE1-218ENST00000439806 PSMA5P28066 241 aa12.52□□□□□ -0.41
CPNE1-218ENST00000439806 VPS53Q5VIR6 699 aa12.52□□□□□ -0.41
CPNE1-218ENST00000439806 CREB3L3Q68CJ9 461 aa12.52□□□□□ -0.41
CPNE1-218ENST00000439806 SNRKQ9NRH2 765 aa12.52□□□□□ -0.41
CPNE1-218ENST00000439806 BTG4Q9NY30 223 aa12.52□□□□□ -0.41
CPNE1-218ENST00000439806 ZNF330Q9Y3S2 320 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-218ENST00000439806 SPEF2Q9C093 1822 aa12.52□□□□□ -0.41
CPNE1-218ENST00000439806 MED23Q9ULK4 1368 aa12.52□□□□□ -0.41
CPNE1-218ENST00000439806 COL16A1Q07092 1604 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-218ENST00000439806 AHDC1Q5TGY3 1603 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-218ENST00000439806 MYH3P11055 1940 aa12.51□□□□□ -0.41
CPNE1-218ENST00000439806 KAT6BQ8WYB5 2073 aa12.51□□□□□ -0.41
CPNE1-218ENST00000439806 PRPF40AO75400 957 aaKnown RBP12.51□□□□□ -0.41
CPNE1-218ENST00000439806 IL15P40933 162 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-218ENST00000439806 NECTIN1Q15223 517 aa12.51□□□□□ -0.41
CPNE1-218ENST00000439806 VSIG10Q8N0Z9 540 aa12.51□□□□□ -0.41
CPNE1-218ENST00000439806 MAP4K1Q92918 833 aa12.51□□□□□ -0.41
CPNE1-218ENST00000439806 DNAJC2Q99543 621 aaKnown RBP12.51□□□□□ -0.41
CPNE1-218ENST00000439806 DBNDD2Q9BQY9 259 aa12.51□□□□□ -0.41
CPNE1-218ENST00000439806 ZSWIM6Q9HCJ5 1215 aa12.51□□□□□ -0.41
CPNE1-218ENST00000439806 SH2B1Q9NRF2 756 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-218ENST00000439806 SMC3Q9UQE7 1217 aa12.51□□□□□ -0.41
CPNE1-218ENST00000439806 SLC27A2O14975 620 aa12.5□□□□□ -0.41
CPNE1-218ENST00000439806 MBD3O95983 291 aa12.5□□□□□ -0.41
CPNE1-218ENST00000439806 TCIRG1Q13488 830 aa12.5□□□□□ -0.41
CPNE1-218ENST00000439806 RUFY3Q7L099 469 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms