RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 CREB3L3Q68CJ9 461 aa18.41■□□□□ 0.54
APP-208ENST00000439274 TCEANC2Q96MN5 208 aa18.41■□□□□ 0.54
APP-208ENST00000439274 FAM13BQ9NYF5 915 aa18.41■□□□□ 0.54
APP-208ENST00000439274 TPCN1Q9ULQ1 816 aa18.41■□□□□ 0.54
APP-208ENST00000439274 KIAA2012Q0VF49 1180 aa18.4■□□□□ 0.54
APP-208ENST00000439274 UVSSAQ2YD98 709 aa18.4■□□□□ 0.54
APP-208ENST00000439274 PROSER2Q86WR7 435 aaPredicted RBP18.4■□□□□ 0.54
APP-208ENST00000439274 ERC1Q8IUD2 1116 aa18.4■□□□□ 0.54
APP-208ENST00000439274 KCNB2Q92953 911 aa18.4■□□□□ 0.54
APP-208ENST00000439274 ATP6V1DQ9Y5K8 247 aa18.4■□□□□ 0.54
APP-208ENST00000439274 KCNH5Q8NCM2 988 aa18.4■□□□□ 0.54
APP-208ENST00000439274 KLHDC4Q8TBB5 520 aa18.4■□□□□ 0.54
APP-208ENST00000439274 TM6SF1Q9BZW5 370 aa18.4■□□□□ 0.54
APP-208ENST00000439274 GRM8O00222 908 aa18.39■□□□□ 0.53
APP-208ENST00000439274 PDCL3Q9H2J4 239 aa18.39■□□□□ 0.53
APP-208ENST00000439274 TTC12Q9H892 705 aaPredicted RBP18.39■□□□□ 0.53
APP-208ENST00000439274 TAF6LQ9Y6J9 622 aa18.39■□□□□ 0.53
APP-208ENST00000439274 AMOTQ4VCS5 1084 aa18.39■□□□□ 0.53
APP-208ENST00000439274 LMOD2Q6P5Q4 547 aa18.39■□□□□ 0.53
APP-208ENST00000439274 VSIG10Q8N0Z9 540 aa18.39■□□□□ 0.53
APP-208ENST00000439274 ZSCAN31Q96LW9 406 aaPredicted RBP18.39■□□□□ 0.53
APP-208ENST00000439274 BOLA2Q9H3K6 86 aa18.39■□□□□ 0.53
APP-208ENST00000439274 A0A0D9SFI3 127 aa18.38■□□□□ 0.53
APP-208ENST00000439274 ZKSCAN1P17029 563 aaPredicted RBP18.38■□□□□ 0.53
APP-208ENST00000439274 PLCB2Q00722 1185 aa18.38■□□□□ 0.53
APP-208ENST00000439274 C17orf53Q8N3J3 647 aaPredicted RBP18.38■□□□□ 0.53
APP-208ENST00000439274 SH2B1Q9NRF2 756 aaPredicted RBP18.38■□□□□ 0.53
APP-208ENST00000439274 LETM1O95202 739 aaPredicted RBP18.38■□□□□ 0.53
APP-208ENST00000439274 GCP02774 474 aa18.38■□□□□ 0.53
APP-208ENST00000439274 G3BP1Q13283 466 aaKnown RBP eCLIP18.38■□□□□ 0.53
APP-208ENST00000439274 FAM173BQ6P4H8 233 aa18.38■□□□□ 0.53
APP-208ENST00000439274 FERMT3Q86UX7 667 aa18.38■□□□□ 0.53
APP-208ENST00000439274 ANKRD24Q8TF21 1146 aa18.38■□□□□ 0.53
APP-208ENST00000439274 FUCA2Q9BTY2 467 aa18.38■□□□□ 0.53
APP-208ENST00000439274 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
APP-208ENST00000439274 SLC27A2O14975 620 aa18.37■□□□□ 0.53
APP-208ENST00000439274 LINS1Q8NG48 757 aa18.37■□□□□ 0.53
APP-208ENST00000439274 MAP4K1Q92918 833 aa18.37■□□□□ 0.53
APP-208ENST00000439274 ORAI2Q96SN7 254 aa18.37■□□□□ 0.53
APP-208ENST00000439274 HEG1Q9ULI3 1381 aa18.37■□□□□ 0.53
APP-208ENST00000439274 CHMP3Q9Y3E7 222 aa18.37■□□□□ 0.53
APP-208ENST00000439274 SASS6Q6UVJ0 657 aa18.36■□□□□ 0.53
APP-208ENST00000439274 FSD1Q9BTV5 496 aa18.36■□□□□ 0.53
APP-208ENST00000439274 TMEM94Q12767 1356 aa18.36■□□□□ 0.53
APP-208ENST00000439274 TRPM3Q9HCF6 1732 aaPredicted RBP18.36■□□□□ 0.53
APP-208ENST00000439274 AP5Z1O43299 807 aa18.35■□□□□ 0.53
APP-208ENST00000439274 IGKV5-2P06315 115 aa18.35■□□□□ 0.53
APP-208ENST00000439274 LARP1BQ659C4 914 aaKnown RBP18.35■□□□□ 0.53
APP-208ENST00000439274 CDC37L1Q7L3B6 337 aa18.35■□□□□ 0.53
APP-208ENST00000439274 ARHGEF25Q86VW2 580 aa18.35■□□□□ 0.53
APP-208ENST00000439274 AXIN2Q9Y2T1 843 aa18.35■□□□□ 0.53
APP-208ENST00000439274 C1orf167Q5SNV9 1468 aa18.35■□□□□ 0.53
APP-208ENST00000439274 KDM4AO75164 1064 aa18.35■□□□□ 0.53
APP-208ENST00000439274 SLC39A6Q13433 755 aa18.35■□□□□ 0.53
APP-208ENST00000439274 PDIA6Q15084 440 aa18.35■□□□□ 0.53
APP-208ENST00000439274 EDC3Q96F86 508 aaKnown RBP18.35■□□□□ 0.53
APP-208ENST00000439274 MYL6BP14649 208 aa18.34■□□□□ 0.53
APP-208ENST00000439274 DNTTIP2Q5QJE6 756 aaKnown RBP18.34■□□□□ 0.53
APP-208ENST00000439274 TTC6Q86TZ1 520 aa18.34■□□□□ 0.53
APP-208ENST00000439274 ZNF589Q86UQ0 364 aaPredicted RBP18.34■□□□□ 0.53
APP-208ENST00000439274 JARID2Q92833 1246 aaPredicted RBP18.34■□□□□ 0.53
APP-208ENST00000439274 KIF1AQ12756 1690 aa18.34■□□□□ 0.53
APP-208ENST00000439274 RIC3Q7Z5B4 369 aa18.33■□□□□ 0.53
APP-208ENST00000439274 DDX21Q9NR30 783 aaKnown RBP eCLIP18.33■□□□□ 0.53
APP-208ENST00000439274 NCAPD2Q15021 1401 aa18.33■□□□□ 0.53
APP-208ENST00000439274 UTYO14607 1347 aa18.33■□□□□ 0.53
APP-208ENST00000439274 EPHA10Q5JZY3 1008 aa18.33■□□□□ 0.52
APP-208ENST00000439274 HDAC5Q9UQL6 1122 aa18.33■□□□□ 0.52
APP-208ENST00000439274 MST1RQ04912 1400 aa18.33■□□□□ 0.52
APP-208ENST00000439274 DDX58O95786 925 aaKnown RBP18.32■□□□□ 0.52
APP-208ENST00000439274 STK3Q13188 491 aa18.32■□□□□ 0.52
APP-208ENST00000439274 PIBF1Q8WXW3 757 aa18.32■□□□□ 0.52
APP-208ENST00000439274 HIP1O00291 1037 aa18.32■□□□□ 0.52
APP-208ENST00000439274 BLOC1S2Q6QNY1 142 aa18.32■□□□□ 0.52
APP-208ENST00000439274 NDUFB9Q9Y6M9 179 aa18.32■□□□□ 0.52
APP-208ENST00000439274 PSMA5P28066 241 aa18.31■□□□□ 0.52
APP-208ENST00000439274 NOLC1Q14978 699 aaKnown RBP eCLIP18.31■□□□□ 0.525e-7■■□□□ 11.6
APP-208ENST00000439274 CAMK4Q16566 473 aa18.31■□□□□ 0.52
APP-208ENST00000439274 C19orf44Q9H6X5 657 aa18.31■□□□□ 0.52
APP-208ENST00000439274 CHGBP05060 677 aa18.31■□□□□ 0.52
APP-208ENST00000439274 LIG1P18858 919 aa18.31■□□□□ 0.52
APP-208ENST00000439274 RPS6KB1P23443 525 aa18.3■□□□□ 0.52
APP-208ENST00000439274 PIP4K2AP48426 406 aaPredicted RBP18.3■□□□□ 0.52
APP-208ENST00000439274 TOB2Q14106 344 aaPredicted RBP18.3■□□□□ 0.52
APP-208ENST00000439274 ARID3AQ99856 593 aa18.3■□□□□ 0.52
APP-208ENST00000439274 MED23Q9ULK4 1368 aa18.3■□□□□ 0.52
APP-208ENST00000439274 PHRF1Q9P1Y6 1649 aaKnown RBP18.3■□□□□ 0.52
APP-208ENST00000439274 DYNC1I1O14576 645 aa18.3■□□□□ 0.52
APP-208ENST00000439274 KRT85P78386 507 aa18.3■□□□□ 0.52
APP-208ENST00000439274 MYD88Q99836 296 aa18.3■□□□□ 0.52
APP-208ENST00000439274 SNRKQ9NRH2 765 aa18.3■□□□□ 0.52
APP-208ENST00000439274 NEURL1BA8MQ27 555 aa18.29■□□□□ 0.52
APP-208ENST00000439274 LARP1Q6PKG0 1096 aaKnown RBP18.29■□□□□ 0.52
APP-208ENST00000439274 XAGE3Q8WTP9 111 aa18.29■□□□□ 0.52
APP-208ENST00000439274 TFIP11Q9UBB9 837 aaKnown RBP18.29■□□□□ 0.52
APP-208ENST00000439274 OVOS2A0A0G2JMS6 1433 aa18.29■□□□□ 0.52
APP-208ENST00000439274 DCCP43146 1447 aa18.29■□□□□ 0.52
APP-208ENST00000439274 SPC24Q8NBT2 197 aa18.29■□□□□ 0.52
APP-208ENST00000439274 RNF20Q5VTR2 975 aa18.28■□□□□ 0.52
APP-208ENST00000439274 COPS6Q7L5N1 327 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms