RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 CNTNAP5Q8WYK1 1306 aa6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 TGFBR3LH3BV60 316 aa6.74□□□□□ -1.33
HMGB3P12-201ENST00000438745 FKBP5Q13451 457 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P12-201ENST00000438745 C11orf91Q3C1V1 193 aa6.74□□□□□ -1.33
HMGB3P12-201ENST00000438745 ERICH6Q7L0X2 663 aa6.74□□□□□ -1.33
HMGB3P12-201ENST00000438745 PRIMPOLQ96LW4 560 aa6.74□□□□□ -1.33
HMGB3P12-201ENST00000438745 SLAIN2Q9P270 581 aa6.74□□□□□ -1.33
HMGB3P12-201ENST00000438745 LRFN2Q9ULH4 789 aa6.74□□□□□ -1.33
HMGB3P12-201ENST00000438745 SIN3BO75182 1162 aa6.73□□□□□ -1.33
HMGB3P12-201ENST00000438745 PPP1R15AO75807 674 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P12-201ENST00000438745 SNRPNP63162 240 aaKnown RBP6.73□□□□□ -1.33
HMGB3P12-201ENST00000438745 KANK3Q6NY19 840 aa6.73□□□□□ -1.33
HMGB3P12-201ENST00000438745 LINC00114Q6XXX2 140 aa6.73□□□□□ -1.33
HMGB3P12-201ENST00000438745 EFCC1Q9HA90 598 aa6.73□□□□□ -1.33
HMGB3P12-201ENST00000438745 C11orf16Q9NQ32 467 aa6.73□□□□□ -1.33
HMGB3P12-201ENST00000438745 CXXC1Q9P0U4 656 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P12-201ENST00000438745 PRR12Q9ULL5 1215 aa6.73□□□□□ -1.33
HMGB3P12-201ENST00000438745 ADARB2-AS1A8MUL3 147 aa6.72□□□□□ -1.33
HMGB3P12-201ENST00000438745 PRMT3O60678 531 aa6.72□□□□□ -1.33
HMGB3P12-201ENST00000438745 GRNP28799 593 aaKnown RBP6.72□□□□□ -1.33
HMGB3P12-201ENST00000438745 INPP5BP32019 993 aa6.72□□□□□ -1.33
HMGB3P12-201ENST00000438745 PCBP4P57723 403 aaKnown RBP6.72□□□□□ -1.33
HMGB3P12-201ENST00000438745 COX20Q5RI15 118 aa6.72□□□□□ -1.33
HMGB3P12-201ENST00000438745 SYT9Q86SS6 491 aa6.72□□□□□ -1.33
HMGB3P12-201ENST00000438745 TNFRSF25Q93038 417 aa6.72□□□□□ -1.33
HMGB3P12-201ENST00000438745 KLK14Q9P0G3 267 aa6.72□□□□□ -1.33
HMGB3P12-201ENST00000438745 ITGB2P05107 769 aa6.71□□□□□ -1.34
HMGB3P12-201ENST00000438745 SPEM2Q0P670 501 aa6.71□□□□□ -1.34
HMGB3P12-201ENST00000438745 GSX2Q9BZM3 304 aa6.71□□□□□ -1.34
HMGB3P12-201ENST00000438745 PHF20L1A8MW92 1017 aa6.7□□□□□ -1.34
HMGB3P12-201ENST00000438745 OPLAHO14841 1288 aa6.7□□□□□ -1.34
HMGB3P12-201ENST00000438745 MICAL2O94851 1124 aa6.7□□□□□ -1.34
HMGB3P12-201ENST00000438745 DGKZQ13574 1117 aa6.7□□□□□ -1.34
HMGB3P12-201ENST00000438745 VTI1AQ96AJ9 217 aa6.7□□□□□ -1.34
HMGB3P12-201ENST00000438745 ELOA3CA0A087WX78 387 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P12-201ENST00000438745 TMEM88BA6NKF7 163 aa6.69□□□□□ -1.34
HMGB3P12-201ENST00000438745 ELOA3DA6NLF2 546 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P12-201ENST00000438745 DGKGP49619 791 aa6.69□□□□□ -1.34
HMGB3P12-201ENST00000438745 ELOA3BQ3SY89 546 aa6.69□□□□□ -1.34
HMGB3P12-201ENST00000438745 CAPN12Q6ZSI9 719 aa6.69□□□□□ -1.34
HMGB3P12-201ENST00000438745 CHSY3Q70JA7 882 aa6.69□□□□□ -1.34
HMGB3P12-201ENST00000438745 ELOA3Q8NG57 546 aa6.69□□□□□ -1.34
HMGB3P12-201ENST00000438745 IFT43Q96FT9 208 aa6.69□□□□□ -1.34
HMGB3P12-201ENST00000438745 SAP130Q9H0E3 1048 aa6.69□□□□□ -1.34
HMGB3P12-201ENST00000438745 MKL2Q9ULH7 1088 aa6.69□□□□□ -1.34
HMGB3P12-201ENST00000438745 PTCD1O75127 700 aaKnown RBP6.68□□□□□ -1.34
HMGB3P12-201ENST00000438745 IDH3AP50213 366 aa6.68□□□□□ -1.34
HMGB3P12-201ENST00000438745 PODNQ7Z5L7 613 aa6.68□□□□□ -1.34
HMGB3P12-201ENST00000438745 NEUROD1Q13562 356 aa6.67□□□□□ -1.34
HMGB3P12-201ENST00000438745 CCINQ13939 588 aa6.67□□□□□ -1.34
HMGB3P12-201ENST00000438745 PLA2G4EQ3MJ16 856 aa6.67□□□□□ -1.34
HMGB3P12-201ENST00000438745 C16orf46Q6P387 395 aa6.67□□□□□ -1.34
HMGB3P12-201ENST00000438745 DCAF5Q96JK2 942 aa6.67□□□□□ -1.34
HMGB3P12-201ENST00000438745 TIMELESSQ9UNS1 1208 aa6.67□□□□□ -1.34
HMGB3P12-201ENST00000438745 STARD13Q9Y3M8 1113 aa6.67□□□□□ -1.34
HMGB3P12-201ENST00000438745 EGFRP00533 1210 aa6.66□□□□□ -1.34
HMGB3P12-201ENST00000438745 EPB42P16452 691 aa6.66□□□□□ -1.34
HMGB3P12-201ENST00000438745 ALAS2P22557 587 aa6.66□□□□□ -1.34
HMGB3P12-201ENST00000438745 AMPD1P23109 780 aa6.66□□□□□ -1.34
HMGB3P12-201ENST00000438745 BRD2P25440 801 aaKnown RBP6.66□□□□□ -1.34
HMGB3P12-201ENST00000438745 ARSDP51689 593 aa6.66□□□□□ -1.34
HMGB3P12-201ENST00000438745 FAM26DQ5JW98 314 aa6.66□□□□□ -1.34
HMGB3P12-201ENST00000438745 RAB44Q7Z6P3 723 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P12-201ENST00000438745 ETFBKMTQ8IXQ9 262 aa6.66□□□□□ -1.34
HMGB3P12-201ENST00000438745 TNFRSF10BO14763 440 aa6.65□□□□□ -1.34
HMGB3P12-201ENST00000438745 ATP2B4P23634 1241 aa6.65□□□□□ -1.34
HMGB3P12-201ENST00000438745 COL8A1P27658 744 aa6.65□□□□□ -1.34
HMGB3P12-201ENST00000438745 SSFA2P28290 1259 aa6.65□□□□□ -1.34
HMGB3P12-201ENST00000438745 COL9A3Q14050 684 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P12-201ENST00000438745 C20orf204Q6ZNR8 217 aa6.65□□□□□ -1.34
HMGB3P12-201ENST00000438745 ALYREFQ86V81 257 aaKnown RBP6.65□□□□□ -1.34
HMGB3P12-201ENST00000438745 TREML1Q86YW5 311 aa6.65□□□□□ -1.34
HMGB3P12-201ENST00000438745 BHMTQ93088 406 aa6.65□□□□□ -1.34
HMGB3P12-201ENST00000438745 RRAGCQ9HB90 399 aa6.65□□□□□ -1.34
HMGB3P12-201ENST00000438745 PRDM6Q9NQX0 595 aa6.65□□□□□ -1.34
HMGB3P12-201ENST00000438745 GNB5O14775 395 aa6.64□□□□□ -1.35
HMGB3P12-201ENST00000438745 MAP3K6O95382 1288 aa6.64□□□□□ -1.35
HMGB3P12-201ENST00000438745 NAA30Q147X3 362 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P12-201ENST00000438745 SUV39H2Q9H5I1 410 aa6.64□□□□□ -1.35
HMGB3P12-201ENST00000438745 ZFATQ9P243 1243 aa6.64□□□□□ -1.35
HMGB3P12-201ENST00000438745 RTCBQ9Y3I0 505 aaKnown RBP6.64□□□□□ -1.35
HMGB3P12-201ENST00000438745 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P12-201ENST00000438745 PIK3R2O00459 728 aa6.63□□□□□ -1.35
HMGB3P12-201ENST00000438745 ADH7P40394 386 aa6.63□□□□□ -1.35
HMGB3P12-201ENST00000438745 ILDR2Q71H61 639 aa6.63□□□□□ -1.35
HMGB3P12-201ENST00000438745 MICALL1Q8N3F8 863 aa6.63□□□□□ -1.35
HMGB3P12-201ENST00000438745 SPOCK3Q9BQ16 436 aa6.63□□□□□ -1.35
HMGB3P12-201ENST00000438745 MKNK1Q9BUB5 465 aa6.63□□□□□ -1.35
HMGB3P12-201ENST00000438745 KCNMB2Q9Y691 235 aa6.63□□□□□ -1.35
HMGB3P12-201ENST00000438745 IGHA1P01876 353 aa6.62□□□□□ -1.35
HMGB3P12-201ENST00000438745 TARSP26639 723 aaKnown RBP6.62□□□□□ -1.35
HMGB3P12-201ENST00000438745 PHLDB3Q6NSJ2 640 aa6.62□□□□□ -1.35
HMGB3P12-201ENST00000438745 TRIM11Q96F44 468 aa6.62□□□□□ -1.35
HMGB3P12-201ENST00000438745 STIM2Q9P246 746 aa6.62□□□□□ -1.35
HMGB3P12-201ENST00000438745 KRBA1A5PL33 1030 aa6.61□□□□□ -1.35
HMGB3P12-201ENST00000438745 ZBTB42B2RXF5 422 aa6.61□□□□□ -1.35
HMGB3P12-201ENST00000438745 ALBP02768 609 aa6.61□□□□□ -1.35
HMGB3P12-201ENST00000438745 PROCP04070 461 aa6.61□□□□□ -1.35
HMGB3P12-201ENST00000438745 NFKB1P19838 968 aa6.61□□□□□ -1.35
HMGB3P12-201ENST00000438745 TRPM4Q8TD43 1214 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms