RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 BRPF1P55201 1214 aaPredicted RBP13.73□□□□□ -0.21
PDLIM5-206ENST00000437932 ANKRD13DQ6ZTN6 518 aa13.73□□□□□ -0.21
PDLIM5-206ENST00000437932 TSC1Q92574 1164 aa13.73□□□□□ -0.21
PDLIM5-206ENST00000437932 RAD21O60216 631 aa13.73□□□□□ -0.21
PDLIM5-206ENST00000437932 CLIP2Q9UDT6 1046 aa13.73□□□□□ -0.21
PDLIM5-206ENST00000437932 SETBP1Q9Y6X0 1596 aa13.73□□□□□ -0.21
PDLIM5-206ENST00000437932 LUZP1Q86V48 1076 aa13.73□□□□□ -0.21
PDLIM5-206ENST00000437932 CCAR1Q8IX12 1150 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-206ENST00000437932 DACT1Q9NYF0 836 aa13.73□□□□□ -0.21
PDLIM5-206ENST00000437932 TLR7Q9NYK1 1049 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-206ENST00000437932 ATP7BP35670 1465 aa13.72□□□□□ -0.21
PDLIM5-206ENST00000437932 APOBRQ0VD83 1088 aa13.72□□□□□ -0.21
PDLIM5-206ENST00000437932 TMEM2Q9UHN6 1383 aa13.72□□□□□ -0.21
PDLIM5-206ENST00000437932 DNAJC25Q9H1X3 360 aa13.72□□□□□ -0.21
PDLIM5-206ENST00000437932 ARHGEF10O15013 1369 aa13.72□□□□□ -0.21
PDLIM5-206ENST00000437932 HSP90AA4PQ58FG1 418 aa13.72□□□□□ -0.21
PDLIM5-206ENST00000437932 PTCH1Q13635 1447 aa13.72□□□□□ -0.21
PDLIM5-206ENST00000437932 ERICH2A1L162 156 aa13.72□□□□□ -0.21
PDLIM5-206ENST00000437932 GCP02774 474 aa13.72□□□□□ -0.21
PDLIM5-206ENST00000437932 EIF4A1P60842 406 aaKnown RBP13.72□□□□□ -0.21
PDLIM5-206ENST00000437932 LMBR1LQ6UX01 489 aa13.72□□□□□ -0.21
PDLIM5-206ENST00000437932 ZNF594Q96JF6 807 aaPredicted RBP13.72□□□□□ -0.21
PDLIM5-206ENST00000437932 MYO3AQ8NEV4 1616 aa13.72□□□□□ -0.21
PDLIM5-206ENST00000437932 ANAPC15P60006 121 aa13.71□□□□□ -0.21
PDLIM5-206ENST00000437932 LRRFIP1Q32MZ4 808 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-206ENST00000437932 RXRAP19793 462 aa13.71□□□□□ -0.21
PDLIM5-206ENST00000437932 METTL24Q5JXM2 366 aa13.71□□□□□ -0.21
PDLIM5-206ENST00000437932 CDC37L1Q7L3B6 337 aa13.71□□□□□ -0.21
PDLIM5-206ENST00000437932 CEP126Q9P2H0 1117 aa13.71□□□□□ -0.21
PDLIM5-206ENST00000437932 NEXMIFQ5QGS0 1516 aa13.71□□□□□ -0.21
PDLIM5-206ENST00000437932 ADCK5Q3MIX3 580 aa13.71□□□□□ -0.21
PDLIM5-206ENST00000437932 BICDL1Q6ZP65 573 aa13.71□□□□□ -0.21
PDLIM5-206ENST00000437932 RASEFQ8IZ41 740 aa13.71□□□□□ -0.22
PDLIM5-206ENST00000437932 IP6K1Q92551 441 aa13.71□□□□□ -0.22
PDLIM5-206ENST00000437932 NAT10Q9H0A0 1025 aaKnown RBP13.71□□□□□ -0.22
PDLIM5-206ENST00000437932 SLC27A2O14975 620 aa13.71□□□□□ -0.22
PDLIM5-206ENST00000437932 PTPRMP28827 1452 aa13.7□□□□□ -0.22
PDLIM5-206ENST00000437932 SGSM2O43147 1006 aa13.7□□□□□ -0.22
PDLIM5-206ENST00000437932 SERPINC1P01008 464 aa13.7□□□□□ -0.22
PDLIM5-206ENST00000437932 ZKSCAN5Q9Y2L8 839 aa13.7□□□□□ -0.22
PDLIM5-206ENST00000437932 CPLX2Q6PUV4 134 aaKnown RBP13.7□□□□□ -0.22
PDLIM5-206ENST00000437932 ERCC4Q92889 916 aaPredicted RBP13.7□□□□□ -0.22
PDLIM5-206ENST00000437932 PIK3C2BO00750 1634 aa13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 FSIP1Q8NA03 581 aa13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 SEC62Q99442 399 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 CFAP45Q9UL16 551 aa13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 KIAA0232Q92628 1395 aa13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 IBTKQ9P2D0 1353 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 GOLGA8BA8MQT2 603 aa13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 LARGE1O95461 756 aa13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 PTGS1P23219 599 aa13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 ME3Q16798 604 aa13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 OLFM4Q6UX06 510 aa13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 NCOA5Q9HCD5 579 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 TBC1D2BQ9UPU7 963 aa13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 NOLC1Q14978 699 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 IMMTQ16891 758 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 PKNOX2Q96KN3 472 aa13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 JAK2O60674 1132 aa13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 HSPA4P34932 840 aa13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 KRT32Q14532 448 aa13.69□□□□□ -0.22
PDLIM5-206ENST00000437932 CCDC171Q6TFL3 1326 aa13.68□□□□□ -0.22
PDLIM5-206ENST00000437932 TIMM10P62072 90 aa13.68□□□□□ -0.22
PDLIM5-206ENST00000437932 CDK12Q9NYV4 1490 aaPredicted RBP13.68□□□□□ -0.22
PDLIM5-206ENST00000437932 AATKQ6ZMQ8 1374 aa13.68□□□□□ -0.22
PDLIM5-206ENST00000437932 CCDC69A6NI79 296 aa13.68□□□□□ -0.22
PDLIM5-206ENST00000437932 IFNL2Q8IZJ0 200 aa13.68□□□□□ -0.22
PDLIM5-206ENST00000437932 CPS1P31327 1500 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 ZNF445P59923 1031 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 A0A0D9SFI3 127 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 U3KPZ7 1027 aaPredicted RBP13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 V9GYY5 206 aaPredicted RBP13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 USP6P35125 1406 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 PLEKHG3A1L390 1219 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 BRD1O95696 1058 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 SNRPA1P09661 255 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 PPP4R3BQ5MIZ7 849 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 CCDC186Q7Z3E2 898 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 ADGRB1O14514 1584 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 A2ML1A8K2U0 1454 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 DBNDD2Q9BQY9 259 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 RAD50Q92878 1312 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 NUTM2BA6NNL0 878 aaPredicted RBP13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 NUTM2EB1AL46 878 aaPredicted RBP13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 OTUD7BQ6GQQ9 843 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 NUTM2AQ8IVF1 878 aaPredicted RBP13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 CCDC112Q8NEF3 446 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 SCAND2PQ9GZW5 306 aaPredicted RBP13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 ARAP3Q8WWN8 1544 aa13.67□□□□□ -0.22
PDLIM5-206ENST00000437932 TTC41PQ6P2S7 1318 aa13.66□□□□□ -0.22
PDLIM5-206ENST00000437932 SAFBQ15424 915 aaKnown RBP eCLIP13.66□□□□□ -0.22
PDLIM5-206ENST00000437932 BEND3Q5T5X7 828 aa13.66□□□□□ -0.22
PDLIM5-206ENST00000437932 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.66□□□□□ -0.22
PDLIM5-206ENST00000437932 CWC25Q9NXE8 425 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-206ENST00000437932 PCMTD1Q96MG8 357 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-206ENST00000437932 TMOD3Q9NYL9 352 aa13.66□□□□□ -0.22
PDLIM5-206ENST00000437932 TPM3P06753 285 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms