RNA–Protein interactions for RNA: ENST00000437575.5

HP1BP3-209, Transcript of heterochromatin protein 1 binding protein 3, human

TSL 3

Gene HP1BP3, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HP1BP3-209	ENST00000437575	NLRP10	Q86W26	655 aa		32.75	■■■□□ 2.83
HP1BP3-209	ENST00000437575	WDR63	Q8IWG1	891 aa		32.75	■■■□□ 2.83
HP1BP3-209	ENST00000437575	SBF1	O95248	1867 aa		32.75	■■■□□ 2.83
HP1BP3-209	ENST00000437575	LMNB1	P20700	586 aa		32.74	■■■□□ 2.83
HP1BP3-209	ENST00000437575	CCDC30	Q5VVM6	783 aa		32.74	■■■□□ 2.83
HP1BP3-209	ENST00000437575	PHAX	Q9H814	394 aa	Known RBP	32.74	■■■□□ 2.83
HP1BP3-209	ENST00000437575	PRELP	P51888	382 aa		32.72	■■■□□ 2.83
HP1BP3-209	ENST00000437575	SOGA3	Q5TF21	947 aa		32.72	■■■□□ 2.83
HP1BP3-209	ENST00000437575	RNF123	Q5XPI4	1314 aa		32.72	■■■□□ 2.83
HP1BP3-209	ENST00000437575	FANCI	Q9NVI1	1328 aa		32.72	■■■□□ 2.83
HP1BP3-209	ENST00000437575	ALDH1B1	P30837	517 aa		32.71	■■■□□ 2.83
HP1BP3-209	ENST00000437575	GOLGA2	Q08379	1002 aa		32.71	■■■□□ 2.83
HP1BP3-209	ENST00000437575	TWISTNB	Q3B726	338 aa	Predicted RBP	32.71	■■■□□ 2.83
HP1BP3-209	ENST00000437575	RPGR	Q92834	1020 aa	Known RBP	32.71	■■■□□ 2.83
HP1BP3-209	ENST00000437575	C7orf43	Q8WVR3	580 aa		32.7	■■■□□ 2.83
HP1BP3-209	ENST00000437575	TRMT112	Q9UI30	125 aa	Known RBP	32.7	■■■□□ 2.83
HP1BP3-209	ENST00000437575	C3orf67	Q6ZVT6	689 aa		32.69	■■■□□ 2.82
HP1BP3-209	ENST00000437575	RIC3	Q7Z5B4	369 aa		32.69	■■■□□ 2.82
HP1BP3-209	ENST00000437575	TAOK3	Q9H2K8	898 aa		32.69	■■■□□ 2.82
HP1BP3-209	ENST00000437575	FER1L6	Q2WGJ9	1857 aa		32.69	■■■□□ 2.82
HP1BP3-209	ENST00000437575	SLC10A5	Q5PT55	438 aa		32.68	■■■□□ 2.82
HP1BP3-209	ENST00000437575	ZNF428	Q96B54	188 aa		32.68	■■■□□ 2.82
HP1BP3-209	ENST00000437575	NLRP3	Q96P20	1036 aa		32.68	■■■□□ 2.82
HP1BP3-209	ENST00000437575	ISCA1	Q9BUE6	129 aa		32.68	■■■□□ 2.82
HP1BP3-209	ENST00000437575	ATP5J2-PTCD1	G3V325	749 aa		32.67	■■■□□ 2.82
HP1BP3-209	ENST00000437575	HOXA10	P31260	410 aa	Predicted RBP	32.67	■■■□□ 2.82
HP1BP3-209	ENST00000437575	C1QTNF8	P60827	252 aa		32.67	■■■□□ 2.82
HP1BP3-209	ENST00000437575	CCDC93	Q567U6	631 aa		32.67	■■■□□ 2.82
HP1BP3-209	ENST00000437575	SH3TC1	Q8TE82	1336 aa		32.67	■■■□□ 2.82
HP1BP3-209	ENST00000437575	LTBP3	Q9NS15	1303 aa		32.67	■■■□□ 2.82
HP1BP3-209	ENST00000437575	STK31	Q9BXU1	1019 aa		32.66	■■■□□ 2.82
HP1BP3-209	ENST00000437575	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.66	■■■□□ 2.82
HP1BP3-209	ENST00000437575	TCERG1	O14776	1098 aa	Known RBP	32.65	■■■□□ 2.82
HP1BP3-209	ENST00000437575	SYNE4	Q8N205	404 aa		32.65	■■■□□ 2.82
HP1BP3-209	ENST00000437575	RBM17	Q96I25	401 aa	Known RBP	32.65	■■■□□ 2.82
HP1BP3-209	ENST00000437575	HCLS1	P14317	486 aa	Predicted RBP	32.64	■■■□□ 2.82
HP1BP3-209	ENST00000437575	OLFM4	Q6UX06	510 aa		32.64	■■■□□ 2.82
HP1BP3-209	ENST00000437575	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.64	■■■□□ 2.82
HP1BP3-209	ENST00000437575	DDX58	O95786	925 aa	Known RBP	32.63	■■■□□ 2.81
HP1BP3-209	ENST00000437575	CRAMP1	Q96RY5	1269 aa		32.62	■■■□□ 2.81
HP1BP3-209	ENST00000437575	CCDC88A	Q3V6T2	1871 aa		32.62	■■■□□ 2.81
HP1BP3-209	ENST00000437575	TIAM2	Q8IVF5	1701 aa		32.61	■■■□□ 2.81
HP1BP3-209	ENST00000437575	TRIM28	Q13263	835 aa	Known RBP	32.61	■■■□□ 2.81
HP1BP3-209	ENST00000437575	NMRK2	Q9NPI5	230 aa		32.61	■■■□□ 2.81
HP1BP3-209	ENST00000437575	KDM2B	Q8NHM5	1336 aa		32.6	■■■□□ 2.81
HP1BP3-209	ENST00000437575	KIF3C	O14782	793 aa		32.6	■■■□□ 2.81
HP1BP3-209	ENST00000437575	EXOSC9	Q06265	439 aa	Known RBP	32.6	■■■□□ 2.81
HP1BP3-209	ENST00000437575	RTKN2	Q8IZC4	609 aa		32.6	■■■□□ 2.81
HP1BP3-209	ENST00000437575	MYD88	Q99836	296 aa		32.6	■■■□□ 2.81
HP1BP3-209	ENST00000437575	MYH16	Q9H6N6	1097 aa		32.6	■■■□□ 2.81
HP1BP3-209	ENST00000437575	FAM89A	Q96GI7	184 aa		32.59	■■■□□ 2.81
HP1BP3-209	ENST00000437575	CCER2	I3L3R5	266 aa		32.58	■■■□□ 2.81
HP1BP3-209	ENST00000437575	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.58	■■■□□ 2.81
HP1BP3-209	ENST00000437575	ZNF521	Q96K83	1311 aa		32.57	■■■□□ 2.8
HP1BP3-209	ENST00000437575	PPEF1	O14829	653 aa	Predicted RBP	32.57	■■■□□ 2.8
HP1BP3-209	ENST00000437575	SLC4A2	P04920	1241 aa		32.57	■■■□□ 2.8
HP1BP3-209	ENST00000437575	LAMB2	P55268	1798 aa		32.56	■■■□□ 2.8
HP1BP3-209	ENST00000437575	VAMP4	O75379	141 aa		32.56	■■■□□ 2.8
HP1BP3-209	ENST00000437575	RTL5	Q5HYW3	569 aa	Predicted RBP	32.56	■■■□□ 2.8
HP1BP3-209	ENST00000437575	METTL22	Q9BUU2	404 aa	Predicted RBP	32.56	■■■□□ 2.8
HP1BP3-209	ENST00000437575	MAP3K2	Q9Y2U5	619 aa		32.56	■■■□□ 2.8
HP1BP3-209	ENST00000437575	ABCC4	O15439	1325 aa		32.55	■■■□□ 2.8
HP1BP3-209	ENST00000437575	CC2D2B	Q6DHV5	1058 aa		32.55	■■■□□ 2.8
HP1BP3-209	ENST00000437575	KSR2	Q6VAB6	950 aa		32.55	■■■□□ 2.8
HP1BP3-209	ENST00000437575	G2E3	Q7L622	706 aa		32.55	■■■□□ 2.8
HP1BP3-209	ENST00000437575	DICER1	Q9UPY3	1922 aa	Known RBP	32.54	■■■□□ 2.8
HP1BP3-209	ENST00000437575	PI4KAP2	A4QPH2	592 aa		32.54	■■■□□ 2.8
HP1BP3-209	ENST00000437575	PI4KAP1	Q8N8J0	262 aa		32.54	■■■□□ 2.8
HP1BP3-209	ENST00000437575	SNED1	Q8TER0	1413 aa		32.53	■■■□□ 2.8
HP1BP3-209	ENST00000437575	GLTPD2	A6NH11	291 aa		32.53	■■■□□ 2.8
HP1BP3-209	ENST00000437575	CCDC191	Q8NCU4	936 aa		32.53	■■■□□ 2.8
HP1BP3-209	ENST00000437575	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.53	■■■□□ 2.8
HP1BP3-209	ENST00000437575	DDX60	Q8IY21	1712 aa	Known RBP	32.53	■■■□□ 2.8
HP1BP3-209	ENST00000437575	SLC51A	Q86UW1	340 aa		32.52	■■■□□ 2.8
HP1BP3-209	ENST00000437575	IRS4	O14654	1257 aa	Predicted RBP	32.51	■■■□□ 2.79
HP1BP3-209	ENST00000437575	DDX46	Q7L014	1031 aa	Known RBP	32.51	■■■□□ 2.79
HP1BP3-209	ENST00000437575	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.51	■■■□□ 2.79
HP1BP3-209	ENST00000437575	CWC25	Q9NXE8	425 aa	Predicted RBP	32.51	■■■□□ 2.79
HP1BP3-209	ENST00000437575	FLII	Q13045	1269 aa		32.5	■■■□□ 2.79
HP1BP3-209	ENST00000437575	PSMD1	Q99460	953 aa		32.5	■■■□□ 2.79
HP1BP3-209	ENST00000437575	RRAGC	Q9HB90	399 aa		32.5	■■■□□ 2.79
HP1BP3-209	ENST00000437575	GRIPAP1	Q4V328	841 aa		32.49	■■■□□ 2.79
HP1BP3-209	ENST00000437575	DPY19L2	Q6NUT2	758 aa		32.49	■■■□□ 2.79
HP1BP3-209	ENST00000437575	TMX4	Q9H1E5	349 aa	Predicted RBP	32.48	■■■□□ 2.79
HP1BP3-209	ENST00000437575	ATP6V0A2	Q9Y487	856 aa		32.48	■■■□□ 2.79
HP1BP3-209	ENST00000437575	BBOX1	O75936	387 aa		32.47	■■■□□ 2.79
HP1BP3-209	ENST00000437575	PCCA	P05165	728 aa	Predicted RBP	32.47	■■■□□ 2.79
HP1BP3-209	ENST00000437575	IARS	P41252	1262 aa	Known RBP	32.47	■■■□□ 2.79
HP1BP3-209	ENST00000437575	NEXN	Q0ZGT2	675 aa		32.47	■■■□□ 2.79
HP1BP3-209	ENST00000437575	GRAP	Q13588	217 aa		32.47	■■■□□ 2.79
HP1BP3-209	ENST00000437575	SF3B3	Q15393	1217 aa	Known RBP	32.47	■■■□□ 2.79
HP1BP3-209	ENST00000437575	GRAPL	Q8TC17	118 aa	Predicted RBP	32.47	■■■□□ 2.79
HP1BP3-209	ENST00000437575	TOMM70	O94826	608 aa		32.46	■■■□□ 2.79
HP1BP3-209	ENST00000437575	IGKV5-2	P06315	115 aa		32.46	■■■□□ 2.79
HP1BP3-209	ENST00000437575	FKBP5	Q13451	457 aa	Predicted RBP	32.46	■■■□□ 2.79
HP1BP3-209	ENST00000437575	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.45	■■■□□ 2.79
HP1BP3-209	ENST00000437575	HSP90B1	P14625	803 aa	Known RBP	32.44	■■■□□ 2.78
HP1BP3-209	ENST00000437575	JARID2	Q92833	1246 aa	Predicted RBP	32.44	■■■□□ 2.78
HP1BP3-209	ENST00000437575	CACNA1F	O60840	1977 aa		32.43	■■■□□ 2.78
HP1BP3-209	ENST00000437575	CWF19L2	Q2TBE0	894 aa	Known RBP	32.42	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms