RNA–Protein interactions for RNA: ENST00000437152.7

SH2D3A-202, Transcript of SH2 domain containing 3A, humanhuman

TSL 2 BASIC

Gene SH2D3A, Length 2,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-202ENST00000437152 GZF1Q9H116 711 aaPredicted RBP28.21■■■□□ 2.11
SH2D3A-202ENST00000437152 RAD50Q92878 1312 aa28.2■■■□□ 2.11
SH2D3A-202ENST00000437152 RBM6P78332 1123 aaKnown RBP28.2■■■□□ 2.11
SH2D3A-202ENST00000437152 TMX3Q96JJ7 454 aa28.2■■■□□ 2.11
SH2D3A-202ENST00000437152 IFIT2P09913 472 aaKnown RBP28.19■■■□□ 2.1
SH2D3A-202ENST00000437152 MYL6BP14649 208 aa28.19■■■□□ 2.1
SH2D3A-202ENST00000437152 CABP4P57796 275 aa28.19■■■□□ 2.1
SH2D3A-202ENST00000437152 CUL4AQ13619 759 aa28.19■■■□□ 2.1
SH2D3A-202ENST00000437152 GCKRQ14397 625 aa28.19■■■□□ 2.1
SH2D3A-202ENST00000437152 LAMB4A4D0S4 1761 aa28.19■■■□□ 2.1
SH2D3A-202ENST00000437152 ANKRD13DQ6ZTN6 518 aa28.19■■■□□ 2.1
SH2D3A-202ENST00000437152 G3BP1Q13283 466 aaKnown RBP eCLIP28.18■■■□□ 2.1
SH2D3A-202ENST00000437152 INTS4Q96HW7 963 aaKnown RBP28.18■■■□□ 2.1
SH2D3A-202ENST00000437152 IL25Q9H293 177 aa28.18■■■□□ 2.1
SH2D3A-202ENST00000437152 PA2G4Q9UQ80 394 aaKnown RBP28.18■■■□□ 2.1
SH2D3A-202ENST00000437152 COL15A1P39059 1388 aa28.18■■■□□ 2.1
SH2D3A-202ENST00000437152 KAT6BQ8WYB5 2073 aa28.18■■■□□ 2.1
SH2D3A-202ENST00000437152 POTEAQ6S8J7 498 aa28.18■■■□□ 2.1
SH2D3A-202ENST00000437152 RUFY2Q8WXA3 655 aa28.18■■■□□ 2.1
SH2D3A-202ENST00000437152 USP16Q9Y5T5 823 aa28.18■■■□□ 2.1
SH2D3A-202ENST00000437152 MAP4K4O95819 1239 aaPredicted RBP28.17■■■□□ 2.1
SH2D3A-202ENST00000437152 SEPT12Q8IYM1 358 aa28.17■■■□□ 2.1
SH2D3A-202ENST00000437152 ZGPATQ8N5A5 531 aaKnown RBP28.17■■■□□ 2.1
SH2D3A-202ENST00000437152 ERBB4Q15303 1308 aa28.17■■■□□ 2.1
SH2D3A-202ENST00000437152 EP400Q96L91 3159 aa28.15■■■□□ 2.1
SH2D3A-202ENST00000437152 RXRBP28702 533 aa28.15■■■□□ 2.1
SH2D3A-202ENST00000437152 MARCH10Q8NA82 808 aaPredicted RBP28.15■■■□□ 2.1
SH2D3A-202ENST00000437152 LSG1Q9H089 658 aaKnown RBP28.15■■■□□ 2.1
SH2D3A-202ENST00000437152 SASH1O94885 1247 aa28.14■■■□□ 2.1
SH2D3A-202ENST00000437152 NKX1-1Q15270 411 aaPredicted RBP28.14■■■□□ 2.1
SH2D3A-202ENST00000437152 KIAA1211Q6ZU35 1233 aa28.14■■■□□ 2.1
SH2D3A-202ENST00000437152 EVI5LQ96CN4 794 aa28.14■■■□□ 2.1
SH2D3A-202ENST00000437152 MYD88Q99836 296 aa28.14■■■□□ 2.1
SH2D3A-202ENST00000437152 AACSQ86V21 672 aa28.14■■■□□ 2.09
SH2D3A-202ENST00000437152 MRE11P49959 708 aa28.13■■■□□ 2.09
SH2D3A-202ENST00000437152 KLHL40Q2TBA0 621 aa28.13■■■□□ 2.09
SH2D3A-202ENST00000437152 DIAPH3Q9NSV4 1193 aa28.13■■■□□ 2.09
SH2D3A-202ENST00000437152 ARFGEF2Q9Y6D5 1785 aa28.12■■■□□ 2.09
SH2D3A-202ENST00000437152 BRWD3Q6RI45 1802 aa28.12■■■□□ 2.09
SH2D3A-202ENST00000437152 ERVV-2B6SEH9 535 aa28.11■■■□□ 2.09
SH2D3A-202ENST00000437152 XRCC6P12956 609 aaKnown RBP eCLIP28.11■■■□□ 2.09
SH2D3A-202ENST00000437152 AFDNP55196 1824 aaKnown RBP28.11■■■□□ 2.09
SH2D3A-202ENST00000437152 HIP1O00291 1037 aa28.11■■■□□ 2.09
SH2D3A-202ENST00000437152 CWC27Q6UX04 472 aaKnown RBP28.11■■■□□ 2.09
SH2D3A-202ENST00000437152 PKP1Q13835 747 aa28.1■■■□□ 2.09
SH2D3A-202ENST00000437152 PLBD2Q8NHP8 589 aa28.1■■■□□ 2.09
SH2D3A-202ENST00000437152 UBR2Q8IWV8 1755 aa28.1■■■□□ 2.09
SH2D3A-202ENST00000437152 TOGARAM1Q9Y4F4 1720 aa28.09■■■□□ 2.09
SH2D3A-202ENST00000437152 EAF2Q96CJ1 260 aaPredicted RBP28.09■■■□□ 2.09
SH2D3A-202ENST00000437152 COPRSQ9NQ92 184 aa28.09■■■□□ 2.09
SH2D3A-202ENST00000437152 ZDHHC9Q9Y397 364 aa28.09■■■□□ 2.09
SH2D3A-202ENST00000437152 SNX14Q9Y5W7 946 aa28.09■■■□□ 2.09
SH2D3A-202ENST00000437152 RABL6Q3YEC7 729 aaPredicted RBP28.08■■■□□ 2.09
SH2D3A-202ENST00000437152 UPF3BQ9BZI7 483 aaKnown RBP28.08■■■□□ 2.08
SH2D3A-202ENST00000437152 FAM182BQ5T319 152 aa28.07■■■□□ 2.08
SH2D3A-202ENST00000437152 MCTP1Q6DN14 999 aa28.06■■■□□ 2.08
SH2D3A-202ENST00000437152 DDX49Q9Y6V7 483 aaKnown RBP28.06■■■□□ 2.08
SH2D3A-202ENST00000437152 EPHA10Q5JZY3 1008 aa28.06■■■□□ 2.08
SH2D3A-202ENST00000437152 ITGB4P16144 1822 aa28.06■■■□□ 2.08
SH2D3A-202ENST00000437152 PAPPAQ13219 1627 aa28.05■■■□□ 2.08
SH2D3A-202ENST00000437152 DOT1LQ8TEK3 1739 aa28.04■■■□□ 2.08
SH2D3A-202ENST00000437152 KCNB2Q92953 911 aa28.04■■■□□ 2.08
SH2D3A-202ENST00000437152 GRPEL1Q9HAV7 217 aa28.04■■■□□ 2.08
SH2D3A-202ENST00000437152 SNRKQ9NRH2 765 aa28.04■■■□□ 2.08
SH2D3A-202ENST00000437152 LMBRD1Q9NUN5 540 aa28.04■■■□□ 2.08
SH2D3A-202ENST00000437152 TTC14Q96N46 770 aa28.04■■■□□ 2.08
SH2D3A-202ENST00000437152 BRD1O95696 1058 aa28.03■■■□□ 2.08
SH2D3A-202ENST00000437152 RFX5P48382 616 aaPredicted RBP28.02■■■□□ 2.08
SH2D3A-202ENST00000437152 SIL1Q9H173 461 aa28.02■■■□□ 2.08
SH2D3A-202ENST00000437152 KRT27Q7Z3Y8 459 aa28.02■■■□□ 2.08
SH2D3A-202ENST00000437152 TM6SF1Q9BZW5 370 aa28.02■■■□□ 2.08
SH2D3A-202ENST00000437152 CCDC8Q9H0W5 538 aaPredicted RBP28.02■■■□□ 2.08
SH2D3A-202ENST00000437152 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.02■■■□□ 2.08
SH2D3A-202ENST00000437152 UBE3BQ7Z3V4 1068 aa28.01■■■□□ 2.07
SH2D3A-202ENST00000437152 ACSBG1Q96GR2 724 aa28.01■■■□□ 2.07
SH2D3A-202ENST00000437152 KCPQ6ZWJ8 1503 aa28.01■■■□□ 2.07
SH2D3A-202ENST00000437152 A0A087WZG4 1122 aa28.01■■■□□ 2.07
SH2D3A-202ENST00000437152 PIP4K2AP48426 406 aaPredicted RBP28.01■■■□□ 2.07
SH2D3A-202ENST00000437152 CASP7P55210 303 aa28.01■■■□□ 2.07
SH2D3A-202ENST00000437152 PTPN12Q05209 780 aaKnown RBP28.01■■■□□ 2.07
SH2D3A-202ENST00000437152 RASEFQ8IZ41 740 aa28.01■■■□□ 2.07
SH2D3A-202ENST00000437152 SYTL4Q96C24 671 aaPredicted RBP28.01■■■□□ 2.07
SH2D3A-202ENST00000437152 NBPF26B4DH59 902 aa27.99■■■□□ 2.07
SH2D3A-202ENST00000437152 NBPF14Q5TI25 921 aa27.99■■■□□ 2.07
SH2D3A-202ENST00000437152 NBPF10Q6P3W6 841 aaKnown RBP27.99■■■□□ 2.07
SH2D3A-202ENST00000437152 NBPF15Q8N660 670 aa27.99■■■□□ 2.07
SH2D3A-202ENST00000437152 PRIM1P49642 420 aaKnown RBP27.99■■■□□ 2.07
SH2D3A-202ENST00000437152 KLHDC4Q8TBB5 520 aa27.99■■■□□ 2.07
SH2D3A-202ENST00000437152 TMOD3Q9NYL9 352 aa27.99■■■□□ 2.07
SH2D3A-202ENST00000437152 CCDC171Q6TFL3 1326 aa27.99■■■□□ 2.07
SH2D3A-202ENST00000437152 NUP188Q5SRE5 1749 aa27.98■■■□□ 2.07
SH2D3A-202ENST00000437152 TLR7Q9NYK1 1049 aaKnown RBP27.98■■■□□ 2.07
SH2D3A-202ENST00000437152 LIMCH1Q9UPQ0 1083 aa27.97■■■□□ 2.07
SH2D3A-202ENST00000437152 H7C1W4 665 aa27.97■■■□□ 2.07
SH2D3A-202ENST00000437152 PTH1RQ03431 593 aa27.97■■■□□ 2.07
SH2D3A-202ENST00000437152 NECTIN1Q15223 517 aa27.97■■■□□ 2.07
SH2D3A-202ENST00000437152 ATP5J2-PTCD1G3V325 749 aa27.96■■■□□ 2.07
SH2D3A-202ENST00000437152 PTCD1O75127 700 aaKnown RBP27.96■■■□□ 2.07
SH2D3A-202ENST00000437152 ATP5JP18859 108 aa27.96■■■□□ 2.07
SH2D3A-202ENST00000437152 NOL8Q76FK4 1167 aaKnown RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms